RNA–Protein interactions for RNA: ENST00000434316.6

TMCO3-202, Transcript of transmembrane and coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO3, Length 3,050 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-202ENST00000434316 SOS1Q07889 1333 aaPredicted RBP18.02■□□□□ 0.47
TMCO3-202ENST00000434316 SURF6O75683 361 aaKnown RBP18.02■□□□□ 0.47
TMCO3-202ENST00000434316 CPA1P15085 419 aa18.02■□□□□ 0.47
TMCO3-202ENST00000434316 TTC12Q9H892 705 aaPredicted RBP18.02■□□□□ 0.47
TMCO3-202ENST00000434316 FAM208AQ9UK61 1670 aaKnown RBP18.02■□□□□ 0.47
TMCO3-202ENST00000434316 AK2P54819 239 aa18.01■□□□□ 0.47
TMCO3-202ENST00000434316 FAM69CQ0P6D2 419 aa18.01■□□□□ 0.47
TMCO3-202ENST00000434316 DNTTIP2Q5QJE6 756 aaKnown RBP18.01■□□□□ 0.47
TMCO3-202ENST00000434316 CCDC183Q5T5S1 534 aa18.01■□□□□ 0.47
TMCO3-202ENST00000434316 KDRP35968 1356 aa18.01■□□□□ 0.47
TMCO3-202ENST00000434316 AMPHP49418 695 aa18.01■□□□□ 0.47
TMCO3-202ENST00000434316 PPP1R42Q7Z4L9 355 aa18.01■□□□□ 0.47
TMCO3-202ENST00000434316 PI4K2BQ8TCG2 481 aa18.01■□□□□ 0.47
TMCO3-202ENST00000434316 PHAXQ9H814 394 aaKnown RBP18.01■□□□□ 0.47
TMCO3-202ENST00000434316 RAD50Q92878 1312 aa18.01■□□□□ 0.47
TMCO3-202ENST00000434316 AGLP35573 1532 aa18.01■□□□□ 0.47
TMCO3-202ENST00000434316 SGSM2O43147 1006 aa18■□□□□ 0.47
TMCO3-202ENST00000434316 ADCY5O95622 1261 aa18■□□□□ 0.47
TMCO3-202ENST00000434316 ZSCAN22P10073 491 aaPredicted RBP18■□□□□ 0.47
TMCO3-202ENST00000434316 RUFY3Q7L099 469 aa18■□□□□ 0.47
TMCO3-202ENST00000434316 TMEM87AQ8NBN3 555 aa18■□□□□ 0.47
TMCO3-202ENST00000434316 SSH3Q8TE77 659 aa18■□□□□ 0.47
TMCO3-202ENST00000434316 TTC14Q96N46 770 aa18■□□□□ 0.47
TMCO3-202ENST00000434316 AOX1Q06278 1338 aa18■□□□□ 0.47
TMCO3-202ENST00000434316 TSC1Q92574 1164 aa18■□□□□ 0.47
TMCO3-202ENST00000434316 IGSF1Q8N6C5 1336 aa18■□□□□ 0.47
TMCO3-202ENST00000434316 FLT4P35916 1363 aa18■□□□□ 0.47
TMCO3-202ENST00000434316 FIBPO43427 364 aa18■□□□□ 0.47
TMCO3-202ENST00000434316 SYT1P21579 422 aa18■□□□□ 0.47
TMCO3-202ENST00000434316 LSG1Q9H089 658 aaKnown RBP18■□□□□ 0.47
TMCO3-202ENST00000434316 TOPAZ1Q8N9V7 1692 aa17.99■□□□□ 0.47
TMCO3-202ENST00000434316 SBNO1A3KN83 1393 aa17.99■□□□□ 0.47
TMCO3-202ENST00000434316 FMN2Q9NZ56 1722 aa17.99■□□□□ 0.47
TMCO3-202ENST00000434316 LARGE1O95461 756 aa17.99■□□□□ 0.47
TMCO3-202ENST00000434316 UVSSAQ2YD98 709 aa17.99■□□□□ 0.47
TMCO3-202ENST00000434316 FAM184AQ8NB25 1140 aa17.99■□□□□ 0.47
TMCO3-202ENST00000434316 IL17REQ8NFR9 667 aa17.99■□□□□ 0.47
TMCO3-202ENST00000434316 RHPN1Q8TCX5 695 aa17.99■□□□□ 0.47
TMCO3-202ENST00000434316 GNAT3A8MTJ3 354 aa17.98■□□□□ 0.47
TMCO3-202ENST00000434316 STX6O43752 255 aa17.98■□□□□ 0.47
TMCO3-202ENST00000434316 SPG7Q9UQ90 795 aa17.98■□□□□ 0.47
TMCO3-202ENST00000434316 CWC27Q6UX04 472 aaKnown RBP17.98■□□□□ 0.47
TMCO3-202ENST00000434316 TSPOAP1O95153 1857 aa17.98■□□□□ 0.47
TMCO3-202ENST00000434316 GIMAP6Q6P9H5 292 aa17.97■□□□□ 0.47
TMCO3-202ENST00000434316 PIBF1Q8WXW3 757 aa17.97■□□□□ 0.47
TMCO3-202ENST00000434316 NOLC1Q14978 699 aaKnown RBP eCLIP17.97■□□□□ 0.47
TMCO3-202ENST00000434316 LIMCH1Q9UPQ0 1083 aa17.97■□□□□ 0.47
TMCO3-202ENST00000434316 SRGAP3O43295 1099 aa17.96■□□□□ 0.47
TMCO3-202ENST00000434316 F13A1P00488 732 aa17.96■□□□□ 0.47
TMCO3-202ENST00000434316 HDGFP51858 240 aaKnown RBP17.96■□□□□ 0.47
TMCO3-202ENST00000434316 UBE2HP62256 183 aa17.96■□□□□ 0.47
TMCO3-202ENST00000434316 PLCB2Q00722 1185 aa17.96■□□□□ 0.47
TMCO3-202ENST00000434316 MYRIPQ8NFW9 859 aa17.96■□□□□ 0.47
TMCO3-202ENST00000434316 SMC3Q9UQE7 1217 aa17.96■□□□□ 0.47
TMCO3-202ENST00000434316 ADAMTS13Q76LX8 1427 aa17.96■□□□□ 0.47
TMCO3-202ENST00000434316 POLA2Q14181 598 aa17.96■□□□□ 0.47
TMCO3-202ENST00000434316 HDGFL1Q5TGJ6 251 aa17.96■□□□□ 0.47
TMCO3-202ENST00000434316 EPB41L2O43491 1005 aaKnown RBP17.95■□□□□ 0.46
TMCO3-202ENST00000434316 RAB11FIP3O75154 756 aa17.95■□□□□ 0.46
TMCO3-202ENST00000434316 NBPF7P0C2Y1 421 aaPredicted RBP17.95■□□□□ 0.46
TMCO3-202ENST00000434316 CASTP20810 708 aaKnown RBP17.95■□□□□ 0.46
TMCO3-202ENST00000434316 CYB5RLQ6IPT4 315 aa17.95■□□□□ 0.46
TMCO3-202ENST00000434316 CCDC83Q8IWF9 413 aa17.95■□□□□ 0.46
TMCO3-202ENST00000434316 LRRC37A3O60309 1634 aa17.94■□□□□ 0.46
TMCO3-202ENST00000434316 FAM177BA6PVY3 158 aa17.94■□□□□ 0.46
TMCO3-202ENST00000434316 AP5Z1O43299 807 aa17.94■□□□□ 0.46
TMCO3-202ENST00000434316 NUTM2GQ5VZR2 741 aa17.94■□□□□ 0.46
TMCO3-202ENST00000434316 CNTROBQ8N137 903 aa17.94■□□□□ 0.46
TMCO3-202ENST00000434316 DDX54Q8TDD1 881 aaKnown RBP17.94■□□□□ 0.46
TMCO3-202ENST00000434316 LTV1Q96GA3 475 aaPredicted RBP17.94■□□□□ 0.46
TMCO3-202ENST00000434316 HTATSF1O43719 755 aaKnown RBP17.94■□□□□ 0.46
TMCO3-202ENST00000434316 EIF2S2P20042 333 aaKnown RBP17.94■□□□□ 0.46
TMCO3-202ENST00000434316 DNM1Q05193 864 aaKnown RBP17.94■□□□□ 0.46
TMCO3-202ENST00000434316 TAF7Q15545 349 aaPredicted RBP17.94■□□□□ 0.46
TMCO3-202ENST00000434316 ESF1Q9H501 851 aaKnown RBP17.94■□□□□ 0.46
TMCO3-202ENST00000434316 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.94■□□□□ 0.46
TMCO3-202ENST00000434316 TMEM2Q9UHN6 1383 aa17.94■□□□□ 0.46
TMCO3-202ENST00000434316 KDM4AO75164 1064 aa17.93■□□□□ 0.46
TMCO3-202ENST00000434316 KIF1BPQ96EK5 621 aa17.93■□□□□ 0.46
TMCO3-202ENST00000434316 SLC26A8Q96RN1 970 aa17.93■□□□□ 0.46
TMCO3-202ENST00000434316 ADCK5Q3MIX3 580 aa17.93■□□□□ 0.46
TMCO3-202ENST00000434316 FUCA2Q9BTY2 467 aa17.93■□□□□ 0.46
TMCO3-202ENST00000434316 GJB2P29033 226 aa17.92■□□□□ 0.46
TMCO3-202ENST00000434316 PTH1RQ03431 593 aa17.92■□□□□ 0.46
TMCO3-202ENST00000434316 MTERF4Q7Z6M4 381 aaKnown RBP17.92■□□□□ 0.46
TMCO3-202ENST00000434316 NGDNQ8NEJ9 315 aaKnown RBP17.92■□□□□ 0.46
TMCO3-202ENST00000434316 TTC21AQ8NDW8 1320 aa17.92■□□□□ 0.46
TMCO3-202ENST00000434316 PXDNLA1KZ92 1463 aa17.92■□□□□ 0.46
TMCO3-202ENST00000434316 HYPKQ9NX55 129 aa17.92■□□□□ 0.46
TMCO3-202ENST00000434316 MAP3K5Q99683 1374 aa17.92■□□□□ 0.46
TMCO3-202ENST00000434316 LETM1O95202 739 aaPredicted RBP17.92■□□□□ 0.46
TMCO3-202ENST00000434316 LTKP29376 864 aa17.92■□□□□ 0.46
TMCO3-202ENST00000434316 MTMR6Q9Y217 621 aa17.92■□□□□ 0.46
TMCO3-202ENST00000434316 CACNA1FO60840 1977 aa17.91■□□□□ 0.46
TMCO3-202ENST00000434316 ZNF710Q8N1W2 664 aa17.91■□□□□ 0.46
TMCO3-202ENST00000434316 USHBP1Q8N6Y0 703 aa17.91■□□□□ 0.46
TMCO3-202ENST00000434316 N4BP2Q86UW6 1770 aaPredicted RBP17.91■□□□□ 0.46
TMCO3-202ENST00000434316 ANXA1P04083 346 aa17.9■□□□□ 0.46
TMCO3-202ENST00000434316 ST3GAL1Q11201 340 aa17.9■□□□□ 0.46
TMCO3-202ENST00000434316 PRPF40BQ6NWY9 871 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms