RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 SLC4A10Q6U841 1118 aa12.21□□□□□ -0.46
HMGCLL1-206ENST00000428842 NBPF26B4DH59 902 aa12.2□□□□□ -0.46
HMGCLL1-206ENST00000428842 ITPK1Q13572 414 aa12.2□□□□□ -0.46
HMGCLL1-206ENST00000428842 NCBP3Q53F19 620 aaKnown RBP12.2□□□□□ -0.46
HMGCLL1-206ENST00000428842 NBPF14Q5TI25 921 aa12.2□□□□□ -0.46
HMGCLL1-206ENST00000428842 NBPF10Q6P3W6 841 aaKnown RBP12.2□□□□□ -0.46
HMGCLL1-206ENST00000428842 NBPF15Q8N660 670 aa12.2□□□□□ -0.46
HMGCLL1-206ENST00000428842 PDIA6Q15084 440 aa12.2□□□□□ -0.46
HMGCLL1-206ENST00000428842 JARID2Q92833 1246 aaPredicted RBP12.2□□□□□ -0.46
HMGCLL1-206ENST00000428842 CDCA7Q9BWT1 371 aaPredicted RBP12.2□□□□□ -0.46
HMGCLL1-206ENST00000428842 KCPQ6ZWJ8 1503 aa12.19□□□□□ -0.46
HMGCLL1-206ENST00000428842 MRC1P22897 1456 aa12.19□□□□□ -0.46
HMGCLL1-206ENST00000428842 BCL11AQ9H165 835 aa12.19□□□□□ -0.46
HMGCLL1-206ENST00000428842 C1orf115Q9H7X2 142 aa12.19□□□□□ -0.46
HMGCLL1-206ENST00000428842 RNF123Q5XPI4 1314 aa12.19□□□□□ -0.46
HMGCLL1-206ENST00000428842 TMEM57Q8N5G2 664 aa12.19□□□□□ -0.46
HMGCLL1-206ENST00000428842 FMNL2Q96PY5 1086 aa12.19□□□□□ -0.46
HMGCLL1-206ENST00000428842 ATP6V1AP38606 617 aa12.18□□□□□ -0.46
HMGCLL1-206ENST00000428842 FKBP5Q13451 457 aaPredicted RBP12.18□□□□□ -0.46
HMGCLL1-206ENST00000428842 RTL5Q5HYW3 569 aaPredicted RBP12.18□□□□□ -0.46
HMGCLL1-206ENST00000428842 HEG1Q9ULI3 1381 aa12.17□□□□□ -0.46
HMGCLL1-206ENST00000428842 FLIIQ13045 1269 aa12.17□□□□□ -0.46
HMGCLL1-206ENST00000428842 TTLL7Q6ZT98 887 aa12.17□□□□□ -0.46
HMGCLL1-206ENST00000428842 LRRC4BQ9NT99 713 aa12.17□□□□□ -0.46
HMGCLL1-206ENST00000428842 BTAF1O14981 1849 aa12.17□□□□□ -0.46
HMGCLL1-206ENST00000428842 SBF2Q86WG5 1849 aa12.17□□□□□ -0.46
HMGCLL1-206ENST00000428842 PALLDQ8WX93 1383 aa12.17□□□□□ -0.46
HMGCLL1-206ENST00000428842 SNRPA1P09661 255 aaKnown RBP12.17□□□□□ -0.46
HMGCLL1-206ENST00000428842 ITPRIPQ8IWB1 547 aa12.17□□□□□ -0.46
HMGCLL1-206ENST00000428842 ZBTB1Q9Y2K1 713 aa12.17□□□□□ -0.46
HMGCLL1-206ENST00000428842 MYH14Q7Z406 1995 aaKnown RBP12.16□□□□□ -0.46
HMGCLL1-206ENST00000428842 LOC102724428A0A0B4J2F2 783 aa12.16□□□□□ -0.46
HMGCLL1-206ENST00000428842 SIK1P57059 783 aa12.16□□□□□ -0.46
HMGCLL1-206ENST00000428842 ATF7IPQ6VMQ6 1270 aa12.16□□□□□ -0.46
HMGCLL1-206ENST00000428842 PI4KAP2A4QPH2 592 aa12.16□□□□□ -0.46
HMGCLL1-206ENST00000428842 CCDC30Q5VVM6 783 aa12.16□□□□□ -0.46
HMGCLL1-206ENST00000428842 COPS6Q7L5N1 327 aa12.16□□□□□ -0.46
HMGCLL1-206ENST00000428842 FTSJ3Q8IY81 847 aaKnown RBP12.16□□□□□ -0.46
HMGCLL1-206ENST00000428842 PI4KAP1Q8N8J0 262 aa12.16□□□□□ -0.46
HMGCLL1-206ENST00000428842 XAGE3Q8WTP9 111 aa12.16□□□□□ -0.46
HMGCLL1-206ENST00000428842 STK31Q9BXU1 1019 aa12.16□□□□□ -0.46
HMGCLL1-206ENST00000428842 ZBTB3Q9H5J0 574 aa12.16□□□□□ -0.46
HMGCLL1-206ENST00000428842 CWF19L2Q2TBE0 894 aaKnown RBP12.15□□□□□ -0.46
HMGCLL1-206ENST00000428842 ZKSCAN2Q63HK3 967 aa12.15□□□□□ -0.46
HMGCLL1-206ENST00000428842 LINC00116Q8NCU8 138 aa12.15□□□□□ -0.46
HMGCLL1-206ENST00000428842 UBR2Q8IWV8 1755 aa12.15□□□□□ -0.47
HMGCLL1-206ENST00000428842 PROM2Q8N271 834 aa12.15□□□□□ -0.47
HMGCLL1-206ENST00000428842 TBC1D2BQ9UPU7 963 aa12.15□□□□□ -0.47
HMGCLL1-206ENST00000428842 ATP5J2-PTCD1G3V325 749 aa12.14□□□□□ -0.47
HMGCLL1-206ENST00000428842 LRP10Q7Z4F1 713 aa12.14□□□□□ -0.47
HMGCLL1-206ENST00000428842 DEFB132Q7Z7B7 95 aa12.14□□□□□ -0.47
HMGCLL1-206ENST00000428842 DZIP1LQ8IYY4 767 aaKnown RBP12.14□□□□□ -0.47
HMGCLL1-206ENST00000428842 PAPPAQ13219 1627 aa12.14□□□□□ -0.47
HMGCLL1-206ENST00000428842 PHF14O94880 888 aa12.13□□□□□ -0.47
HMGCLL1-206ENST00000428842 CYP19A1P11511 503 aaPredicted RBP12.13□□□□□ -0.47
HMGCLL1-206ENST00000428842 ALDH1L2Q3SY69 923 aa12.13□□□□□ -0.47
HMGCLL1-206ENST00000428842 APBA3O96018 575 aa12.12□□□□□ -0.47
HMGCLL1-206ENST00000428842 MAP3K2Q9Y2U5 619 aa12.12□□□□□ -0.47
HMGCLL1-206ENST00000428842 ADCY9O60503 1353 aa12.12□□□□□ -0.47
HMGCLL1-206ENST00000428842 FAM177BA6PVY3 158 aa12.12□□□□□ -0.47
HMGCLL1-206ENST00000428842 CRKLP46109 303 aaKnown RBP12.12□□□□□ -0.47
HMGCLL1-206ENST00000428842 ERICH6BQ5W0A0 696 aa12.12□□□□□ -0.47
HMGCLL1-206ENST00000428842 DBF4Q9UBU7 674 aaPredicted RBP12.12□□□□□ -0.47
HMGCLL1-206ENST00000428842 CCNL1Q9UK58 526 aaPredicted RBP12.12□□□□□ -0.47
HMGCLL1-206ENST00000428842 EN1Q05925 392 aaPredicted RBP12.11□□□□□ -0.47
HMGCLL1-206ENST00000428842 HLFQ16534 295 aa12.11□□□□□ -0.47
HMGCLL1-206ENST00000428842 INTS5Q6P9B9 1019 aaKnown RBP12.11□□□□□ -0.47
HMGCLL1-206ENST00000428842 FAM196AQ6ZSG2 479 aa12.11□□□□□ -0.47
HMGCLL1-206ENST00000428842 SYNE4Q8N205 404 aa12.11□□□□□ -0.47
HMGCLL1-206ENST00000428842 MEIS3Q99687 375 aa12.11□□□□□ -0.47
HMGCLL1-206ENST00000428842 BABAM1Q9NWV8 329 aa12.11□□□□□ -0.47
HMGCLL1-206ENST00000428842 DDX21Q9NR30 783 aaKnown RBP eCLIP12.1□□□□□ -0.47
HMGCLL1-206ENST00000428842 PCDHB15Q9Y5E8 787 aa12.1□□□□□ -0.47
HMGCLL1-206ENST00000428842 TJP1Q07157 1748 aa12.1□□□□□ -0.47
HMGCLL1-206ENST00000428842 KIF16BQ96L93 1317 aa12.1□□□□□ -0.47
HMGCLL1-206ENST00000428842 CT47B1P0C2W7 299 aaPredicted RBP12.09□□□□□ -0.47
HMGCLL1-206ENST00000428842 GPTP24298 496 aa12.09□□□□□ -0.47
HMGCLL1-206ENST00000428842 CCDC24Q8N4L8 307 aa12.09□□□□□ -0.47
HMGCLL1-206ENST00000428842 BCL11BQ9C0K0 894 aaPredicted RBP12.09□□□□□ -0.47
HMGCLL1-206ENST00000428842 PDGFDQ9GZP0 370 aaPredicted RBP12.09□□□□□ -0.47
HMGCLL1-206ENST00000428842 MVPQ14764 893 aaKnown RBP12.09□□□□□ -0.47
HMGCLL1-206ENST00000428842 SRP68Q9UHB9 627 aaKnown RBP12.09□□□□□ -0.47
HMGCLL1-206ENST00000428842 NHSQ6T4R5 1651 aa12.08□□□□□ -0.48
HMGCLL1-206ENST00000428842 IGHDP01880 384 aa12.08□□□□□ -0.48
HMGCLL1-206ENST00000428842 NBPF7P0C2Y1 421 aaPredicted RBP12.08□□□□□ -0.48
HMGCLL1-206ENST00000428842 EZH2Q15910 746 aaKnown RBP12.08□□□□□ -0.48
HMGCLL1-206ENST00000428842 RIC3Q7Z5B4 369 aa12.08□□□□□ -0.48
HMGCLL1-206ENST00000428842 MYD88Q99836 296 aa12.08□□□□□ -0.48
HMGCLL1-206ENST00000428842 GNPATO15228 680 aa12.08□□□□□ -0.48
HMGCLL1-206ENST00000428842 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.08□□□□□ -0.48
HMGCLL1-206ENST00000428842 ABCC4O15439 1325 aa12.08□□□□□ -0.48
HMGCLL1-206ENST00000428842 IGKV5-2P06315 115 aa12.07□□□□□ -0.48
HMGCLL1-206ENST00000428842 BICDL1Q6ZP65 573 aa12.07□□□□□ -0.48
HMGCLL1-206ENST00000428842 STARD3NLO95772 234 aa12.07□□□□□ -0.48
HMGCLL1-206ENST00000428842 TXNRD1Q16881 649 aa12.07□□□□□ -0.48
HMGCLL1-206ENST00000428842 ANKRD13DQ6ZTN6 518 aa12.07□□□□□ -0.48
HMGCLL1-206ENST00000428842 CCDC85AQ96PX6 553 aaPredicted RBP12.07□□□□□ -0.48
HMGCLL1-206ENST00000428842 PLEKHG2Q9H7P9 1386 aa12.07□□□□□ -0.48
HMGCLL1-206ENST00000428842 IPO8O15397 1037 aaKnown RBP12.06□□□□□ -0.48
HMGCLL1-206ENST00000428842 RBM19Q9Y4C8 960 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms