RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 GTF3C6Q969F1 213 aa19.08■□□□□ 0.64
C9orf3-206ENST00000428313 CBX8Q9HC52 389 aa19.08■□□□□ 0.64
C9orf3-206ENST00000428313 POLKQ9UBT6 870 aa19.08■□□□□ 0.64
C9orf3-206ENST00000428313 GLI2P10070 1586 aa19.07■□□□□ 0.64
C9orf3-206ENST00000428313 AATKQ6ZMQ8 1374 aa19.07■□□□□ 0.64
C9orf3-206ENST00000428313 SYT1P21579 422 aa19.07■□□□□ 0.64
C9orf3-206ENST00000428313 GTF2A1P52655 376 aaPredicted RBP19.07■□□□□ 0.64
C9orf3-206ENST00000428313 SRPK2P78362 688 aaKnown RBP19.07■□□□□ 0.64
C9orf3-206ENST00000428313 ICE2Q659A1 982 aa19.07■□□□□ 0.64
C9orf3-206ENST00000428313 SYT10Q6XYQ8 523 aa19.07■□□□□ 0.64
C9orf3-206ENST00000428313 CLIP2Q9UDT6 1046 aa19.07■□□□□ 0.64
C9orf3-206ENST00000428313 MROH1Q8NDA8 1641 aa19.07■□□□□ 0.64
C9orf3-206ENST00000428313 EFCAB6Q5THR3 1501 aa19.07■□□□□ 0.64
C9orf3-206ENST00000428313 PDE1AP54750 535 aa19.07■□□□□ 0.64
C9orf3-206ENST00000428313 GPS2Q13227 327 aa19.07■□□□□ 0.64
C9orf3-206ENST00000428313 NUP62CLQ9H1M0 184 aa19.07■□□□□ 0.64
C9orf3-206ENST00000428313 RNF216Q9NWF9 866 aaPredicted RBP19.07■□□□□ 0.64
C9orf3-206ENST00000428313 LRRC7Q96NW7 1537 aa19.07■□□□□ 0.64
C9orf3-206ENST00000428313 MYO1CO00159 1063 aa19.06■□□□□ 0.64
C9orf3-206ENST00000428313 SOX12O15370 315 aa19.06■□□□□ 0.64
C9orf3-206ENST00000428313 LRRC8AQ8IWT6 810 aa19.06■□□□□ 0.64
C9orf3-206ENST00000428313 L2HGDHQ9H9P8 463 aa19.06■□□□□ 0.64
C9orf3-206ENST00000428313 ATP8B1O43520 1251 aa19.05■□□□□ 0.64
C9orf3-206ENST00000428313 PSEN1P49768 467 aa19.05■□□□□ 0.64
C9orf3-206ENST00000428313 CLCN6P51797 869 aa19.05■□□□□ 0.64
C9orf3-206ENST00000428313 GNAI1P63096 354 aa19.05■□□□□ 0.64
C9orf3-206ENST00000428313 ADGRB1O14514 1584 aa19.05■□□□□ 0.64
C9orf3-206ENST00000428313 ZRANB2O95218 330 aaKnown RBP eCLIP19.05■□□□□ 0.64
C9orf3-206ENST00000428313 KRBA2Q6ZNG9 492 aa19.05■□□□□ 0.64
C9orf3-206ENST00000428313 FCHSD2O94868 740 aa19.04■□□□□ 0.64
C9orf3-206ENST00000428313 TSPYL6Q8N831 410 aa19.04■□□□□ 0.64
C9orf3-206ENST00000428313 NEK11Q8NG66 645 aa19.04■□□□□ 0.64
C9orf3-206ENST00000428313 UBXN6Q9BZV1 441 aa19.04■□□□□ 0.64
C9orf3-206ENST00000428313 CAVIN2O95810 425 aa19.04■□□□□ 0.64
C9orf3-206ENST00000428313 AXDND1Q5T1B0 1012 aaPredicted RBP19.04■□□□□ 0.64
C9orf3-206ENST00000428313 UPF3BQ9BZI7 483 aaKnown RBP19.04■□□□□ 0.64
C9orf3-206ENST00000428313 ATG3Q9NT62 314 aa19.04■□□□□ 0.64
C9orf3-206ENST00000428313 ADGRB3O60242 1522 aa19.03■□□□□ 0.64
C9orf3-206ENST00000428313 USP27XA6NNY8 438 aa19.03■□□□□ 0.64
C9orf3-206ENST00000428313 CCDC144BQ3MJ40 725 aa19.03■□□□□ 0.64
C9orf3-206ENST00000428313 ANO6Q4KMQ2 910 aa19.03■□□□□ 0.64
C9orf3-206ENST00000428313 RBM43Q6ZSC3 357 aaKnown RBP19.03■□□□□ 0.64
C9orf3-206ENST00000428313 CCDC144CPQ8IYA2 1237 aa19.03■□□□□ 0.64
C9orf3-206ENST00000428313 ANO2Q9NQ90 1003 aa19.03■□□□□ 0.64
C9orf3-206ENST00000428313 ARGLU1Q9NWB6 273 aaPredicted RBP19.03■□□□□ 0.64
C9orf3-206ENST00000428313 PNPLA6Q8IY17 1366 aa19.03■□□□□ 0.64
C9orf3-206ENST00000428313 CFAP65Q6ZU64 1925 aaKnown RBP19.03■□□□□ 0.64
C9orf3-206ENST00000428313 CLGNO14967 610 aa19.03■□□□□ 0.64
C9orf3-206ENST00000428313 SARM1Q6SZW1 724 aa19.03■□□□□ 0.64
C9orf3-206ENST00000428313 FILIP1Q7Z7B0 1213 aa19.03■□□□□ 0.64
C9orf3-206ENST00000428313 SLC26A8Q96RN1 970 aa19.03■□□□□ 0.64
C9orf3-206ENST00000428313 LRRFIP2Q9Y608 721 aaKnown RBP19.03■□□□□ 0.64
C9orf3-206ENST00000428313 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.02■□□□□ 0.64
C9orf3-206ENST00000428313 DIAPH1O60610 1272 aaKnown RBP19.02■□□□□ 0.64
C9orf3-206ENST00000428313 ZNF853P0CG23 659 aa19.02■□□□□ 0.64
C9orf3-206ENST00000428313 ZSCAN26Q16670 478 aa19.02■□□□□ 0.64
C9orf3-206ENST00000428313 TPRNQ4KMQ1 711 aa19.02■□□□□ 0.64
C9orf3-206ENST00000428313 CCAR2Q8N163 923 aaKnown RBP19.02■□□□□ 0.64
C9orf3-206ENST00000428313 GOLGA6L1Q8N7Z2 621 aa19.02■□□□□ 0.64
C9orf3-206ENST00000428313 MYCBPQ99417 103 aaPredicted RBP19.02■□□□□ 0.64
C9orf3-206ENST00000428313 MROH2AA6NES4 1674 aa19.02■□□□□ 0.64
C9orf3-206ENST00000428313 CHMLP26374 656 aa19.02■□□□□ 0.63
C9orf3-206ENST00000428313 DNM1Q05193 864 aaKnown RBP19.02■□□□□ 0.63
C9orf3-206ENST00000428313 TWISTNBQ3B726 338 aaPredicted RBP19.02■□□□□ 0.63
C9orf3-206ENST00000428313 ZBTB9Q96C00 473 aa19.02■□□□□ 0.63
C9orf3-206ENST00000428313 MRFAP1L1Q96HT8 127 aa19.02■□□□□ 0.63
C9orf3-206ENST00000428313 NCAPGQ9BPX3 1015 aa19.02■□□□□ 0.63
C9orf3-206ENST00000428313 SMC3Q9UQE7 1217 aa19.02■□□□□ 0.63
C9orf3-206ENST00000428313 TUBB4AP04350 444 aa19.01■□□□□ 0.63
C9orf3-206ENST00000428313 BRD2P25440 801 aaKnown RBP19.01■□□□□ 0.63
C9orf3-206ENST00000428313 CCDC191Q8NCU4 936 aa19.01■□□□□ 0.63
C9orf3-206ENST00000428313 ERCC6L2Q5T890 1561 aa19.01■□□□□ 0.63
C9orf3-206ENST00000428313 HMMRO75330 724 aa19■□□□□ 0.63
C9orf3-206ENST00000428313 GUCY2CP25092 1073 aa19■□□□□ 0.63
C9orf3-206ENST00000428313 HSPA4P34932 840 aa19■□□□□ 0.63
C9orf3-206ENST00000428313 ERCC6LQ2NKX8 1250 aa19■□□□□ 0.63
C9orf3-206ENST00000428313 TMCO3Q6UWJ1 677 aa19■□□□□ 0.63
C9orf3-206ENST00000428313 C10orf67Q8IYJ2 551 aa19■□□□□ 0.63
C9orf3-206ENST00000428313 IQUBQ8NA54 791 aa19■□□□□ 0.63
C9orf3-206ENST00000428313 GOLGA5Q8TBA6 731 aa19■□□□□ 0.63
C9orf3-206ENST00000428313 SALL3Q9BXA9 1300 aa19■□□□□ 0.63
C9orf3-206ENST00000428313 SKILP12757 684 aa19■□□□□ 0.63
C9orf3-206ENST00000428313 CCDC93Q567U6 631 aa19■□□□□ 0.63
C9orf3-206ENST00000428313 SRLQ86TD4 932 aa19■□□□□ 0.63
C9orf3-206ENST00000428313 TNMDQ9H2S6 317 aa19■□□□□ 0.63
C9orf3-206ENST00000428313 PSD3Q9NYI0 1048 aa19■□□□□ 0.63
C9orf3-206ENST00000428313 MTMR6Q9Y217 621 aa19■□□□□ 0.63
C9orf3-206ENST00000428313 KIAA0232Q92628 1395 aa18.99■□□□□ 0.63
C9orf3-206ENST00000428313 SMARCE1Q969G3 411 aa18.99■□□□□ 0.63
C9orf3-206ENST00000428313 TTC14Q96N46 770 aa18.99■□□□□ 0.63
C9orf3-206ENST00000428313 DDX19AQ9NUU7 478 aaKnown RBP18.99■□□□□ 0.63
C9orf3-206ENST00000428313 HDAC5Q9UQL6 1122 aa18.99■□□□□ 0.63
C9orf3-206ENST00000428313 PPLO60437 1756 aa18.99■□□□□ 0.63
C9orf3-206ENST00000428313 FBXO18Q8NFZ0 1043 aa18.99■□□□□ 0.63
C9orf3-206ENST00000428313 LIMCH1Q9UPQ0 1083 aa18.99■□□□□ 0.63
C9orf3-206ENST00000428313 TULP4Q9NRJ4 1543 aa18.99■□□□□ 0.63
C9orf3-206ENST00000428313 TTC21BQ7Z4L5 1316 aa18.98■□□□□ 0.63
C9orf3-206ENST00000428313 CCZ1BP86790 482 aa18.98■□□□□ 0.63
C9orf3-206ENST00000428313 CCZ1P86791 482 aaPredicted RBP18.98■□□□□ 0.63
C9orf3-206ENST00000428313 NFE2L2Q16236 605 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms