RNA–Protein interactions for RNA: ENST00000427778.1

LINC00963-204, long intergenic non-protein coding RNA 963, humanhuman

TSL 2

Gene LINC00963, Length 382 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-204ENST00000427778 KCNQ4P56696 695 aa11.83□□□□□ -0.52
LINC00963-204ENST00000427778 SIK1P57059 783 aa11.83□□□□□ -0.52
LINC00963-204ENST00000427778 CNGB1Q14028 1251 aaPredicted RBP11.83□□□□□ -0.52
LINC00963-204ENST00000427778 RALBP1Q15311 655 aa11.83□□□□□ -0.52
LINC00963-204ENST00000427778 SLC39A7Q92504 469 aa11.83□□□□□ -0.52
LINC00963-204ENST00000427778 RSPH6AQ9H0K4 717 aa11.83□□□□□ -0.52
LINC00963-204ENST00000427778 ATG3Q9NT62 314 aa11.83□□□□□ -0.52
LINC00963-204ENST00000427778 ASAP1Q9ULH1 1129 aa11.83□□□□□ -0.52
LINC00963-204ENST00000427778 NUDCQ9Y266 331 aa11.83□□□□□ -0.52
LINC00963-204ENST00000427778 MYH14Q7Z406 1995 aaKnown RBP11.83□□□□□ -0.52
LINC00963-204ENST00000427778 DLG5Q8TDM6 1919 aa11.82□□□□□ -0.52
LINC00963-204ENST00000427778 C7P10643 843 aa11.82□□□□□ -0.52
LINC00963-204ENST00000427778 MTHFSDQ2M296 383 aaKnown RBP11.82□□□□□ -0.52
LINC00963-204ENST00000427778 TFCP2L1Q9NZI6 479 aa11.82□□□□□ -0.52
LINC00963-204ENST00000427778 FCHSD2O94868 740 aa11.81□□□□□ -0.52
LINC00963-204ENST00000427778 CABP4P57796 275 aa11.81□□□□□ -0.52
LINC00963-204ENST00000427778 DDX10Q13206 875 aaKnown RBP11.81□□□□□ -0.52
LINC00963-204ENST00000427778 GAS2L2Q8NHY3 880 aa11.81□□□□□ -0.52
LINC00963-204ENST00000427778 KCPQ6ZWJ8 1503 aa11.81□□□□□ -0.52
LINC00963-204ENST00000427778 CEMIPQ8WUJ3 1361 aa11.8□□□□□ -0.52
LINC00963-204ENST00000427778 SPDYE4A6NLX3 237 aa11.8□□□□□ -0.52
LINC00963-204ENST00000427778 KIF3CO14782 793 aa11.8□□□□□ -0.52
LINC00963-204ENST00000427778 RNMTO43148 476 aaKnown RBP11.8□□□□□ -0.52
LINC00963-204ENST00000427778 PRKAR2BP31323 418 aa11.8□□□□□ -0.52
LINC00963-204ENST00000427778 NFATC2IPQ8NCF5 419 aa11.8□□□□□ -0.52
LINC00963-204ENST00000427778 FLAD1Q8NFF5 587 aa11.8□□□□□ -0.52
LINC00963-204ENST00000427778 SLC52A2Q9HAB3 445 aa11.8□□□□□ -0.52
LINC00963-204ENST00000427778 KIF13BQ9NQT8 1826 aa11.79□□□□□ -0.52
LINC00963-204ENST00000427778 U2AF1L5P0DN76 240 aaPredicted RBP11.79□□□□□ -0.52
LINC00963-204ENST00000427778 U2AF1Q01081 240 aaKnown RBP eCLIP11.79□□□□□ -0.52
LINC00963-204ENST00000427778 ITPK1Q13572 414 aa11.79□□□□□ -0.52
LINC00963-204ENST00000427778 SLC4A9Q96Q91 983 aa11.79□□□□□ -0.52
LINC00963-204ENST00000427778 C4AP0C0L4 1744 aa11.79□□□□□ -0.52
LINC00963-204ENST00000427778 KIAA1551Q9HCM1 1747 aa11.79□□□□□ -0.52
LINC00963-204ENST00000427778 MYBBP1AQ9BQG0 1328 aaKnown RBP11.79□□□□□ -0.52
LINC00963-204ENST00000427778 N4BP2Q86UW6 1770 aaPredicted RBP11.79□□□□□ -0.52
LINC00963-204ENST00000427778 BRCA1P38398 1863 aaKnown RBP11.78□□□□□ -0.52
LINC00963-204ENST00000427778 GNAT3A8MTJ3 354 aa11.78□□□□□ -0.52
LINC00963-204ENST00000427778 COL13A1Q5TAT6 717 aaPredicted RBP11.78□□□□□ -0.52
LINC00963-204ENST00000427778 ASTLQ6HA08 431 aaPredicted RBP11.78□□□□□ -0.52
LINC00963-204ENST00000427778 LINC00116Q8NCU8 138 aa11.78□□□□□ -0.52
LINC00963-204ENST00000427778 MS4A3Q96HJ5 214 aa11.78□□□□□ -0.52
LINC00963-204ENST00000427778 PHACTR3Q96KR7 559 aa11.78□□□□□ -0.52
LINC00963-204ENST00000427778 LGR6Q9HBX8 967 aa11.78□□□□□ -0.52
LINC00963-204ENST00000427778 PCNTO95613 3336 aa11.78□□□□□ -0.52
LINC00963-204ENST00000427778 CNTNAP4Q9C0A0 1308 aa11.78□□□□□ -0.52
LINC00963-204ENST00000427778 TNRC6CQ9HCJ0 1690 aaKnown RBP11.78□□□□□ -0.52
LINC00963-204ENST00000427778 SSFA2P28290 1259 aa11.77□□□□□ -0.53
LINC00963-204ENST00000427778 ATP6V1AP38606 617 aa11.77□□□□□ -0.53
LINC00963-204ENST00000427778 RC3H1Q5TC82 1133 aaKnown RBP11.77□□□□□ -0.53
LINC00963-204ENST00000427778 MSL1Q68DK7 614 aa11.77□□□□□ -0.53
LINC00963-204ENST00000427778 DNAJC5GQ8N7S2 189 aa11.77□□□□□ -0.53
LINC00963-204ENST00000427778 AK7Q96M32 723 aa11.77□□□□□ -0.53
LINC00963-204ENST00000427778 SCUBE2Q9NQ36 999 aa11.77□□□□□ -0.53
LINC00963-204ENST00000427778 ATMINO43313 823 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-204ENST00000427778 PRELPP51888 382 aa11.76□□□□□ -0.53
LINC00963-204ENST00000427778 COL23A1Q86Y22 540 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-204ENST00000427778 TNS4Q8IZW8 715 aa11.76□□□□□ -0.53
LINC00963-204ENST00000427778 IL17REQ8NFR9 667 aa11.76□□□□□ -0.53
LINC00963-204ENST00000427778 FAM163AQ96GL9 167 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-204ENST00000427778 CD2APQ9Y5K6 639 aa11.76□□□□□ -0.53
LINC00963-204ENST00000427778 ARFGEF1Q9Y6D6 1849 aa11.75□□□□□ -0.53
LINC00963-204ENST00000427778 HTATSF1O43719 755 aaKnown RBP11.75□□□□□ -0.53
LINC00963-204ENST00000427778 AMIGO3Q86WK7 504 aa11.75□□□□□ -0.53
LINC00963-204ENST00000427778 PRKRIP1Q9H875 184 aaPredicted RBP11.75□□□□□ -0.53
LINC00963-204ENST00000427778 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.74□□□□□ -0.53
LINC00963-204ENST00000427778 TOMM70O94826 608 aa11.74□□□□□ -0.53
LINC00963-204ENST00000427778 VSIG10Q8N0Z9 540 aa11.74□□□□□ -0.53
LINC00963-204ENST00000427778 PLEKHF1Q96S99 279 aa11.74□□□□□ -0.53
LINC00963-204ENST00000427778 KDM3BQ7LBC6 1761 aa11.74□□□□□ -0.53
LINC00963-204ENST00000427778 GNPATO15228 680 aa11.73□□□□□ -0.53
LINC00963-204ENST00000427778 PTCD1O75127 700 aaKnown RBP11.73□□□□□ -0.53
LINC00963-204ENST00000427778 TEFQ10587 303 aa11.73□□□□□ -0.53
LINC00963-204ENST00000427778 PNNQ9H307 717 aaKnown RBP11.73□□□□□ -0.53
LINC00963-204ENST00000427778 RPS6KA4O75676 772 aa11.72□□□□□ -0.53
LINC00963-204ENST00000427778 KLRG1Q96E93 195 aa11.72□□□□□ -0.53
LINC00963-204ENST00000427778 WWC3Q9ULE0 1092 aa11.72□□□□□ -0.53
LINC00963-204ENST00000427778 LAMB4A4D0S4 1761 aa11.72□□□□□ -0.53
LINC00963-204ENST00000427778 ZNF316A6NFI3 1004 aaPredicted RBP11.71□□□□□ -0.53
LINC00963-204ENST00000427778 NEFMP07197 916 aa11.71□□□□□ -0.53
LINC00963-204ENST00000427778 CRKLP46109 303 aaKnown RBP11.71□□□□□ -0.53
LINC00963-204ENST00000427778 SLC39A6Q13433 755 aa11.71□□□□□ -0.53
LINC00963-204ENST00000427778 ZNF790Q6PG37 636 aa11.71□□□□□ -0.53
LINC00963-204ENST00000427778 JMYQ8N9B5 988 aa11.71□□□□□ -0.53
LINC00963-204ENST00000427778 RTCBQ9Y3I0 505 aaKnown RBP11.71□□□□□ -0.53
LINC00963-204ENST00000427778 HEG1Q9ULI3 1381 aa11.7□□□□□ -0.54
LINC00963-204ENST00000427778 CYP19A1P11511 503 aaPredicted RBP11.7□□□□□ -0.54
LINC00963-204ENST00000427778 MNX1P50219 401 aaPredicted RBP11.7□□□□□ -0.54
LINC00963-204ENST00000427778 NFE2L2Q16236 605 aa11.7□□□□□ -0.54
LINC00963-204ENST00000427778 TTC5Q8N0Z6 440 aa11.7□□□□□ -0.54
LINC00963-204ENST00000427778 RTF1Q92541 710 aaKnown RBP11.7□□□□□ -0.54
LINC00963-204ENST00000427778 SBF1O95248 1867 aa11.7□□□□□ -0.54
LINC00963-204ENST00000427778 MAPK8IP3Q9UPT6 1336 aa11.69□□□□□ -0.54
LINC00963-204ENST00000427778 PHF14O94880 888 aa11.69□□□□□ -0.54
LINC00963-204ENST00000427778 POTEJP0CG39 1038 aa11.69□□□□□ -0.54
LINC00963-204ENST00000427778 INTS5Q6P9B9 1019 aaKnown RBP11.69□□□□□ -0.54
LINC00963-204ENST00000427778 DNAJC10Q8IXB1 793 aa11.69□□□□□ -0.54
LINC00963-204ENST00000427778 ZNF496Q96IT1 587 aaPredicted RBP11.69□□□□□ -0.54
LINC00963-204ENST00000427778 CCDC87Q9NVE4 849 aa11.69□□□□□ -0.54
LINC00963-204ENST00000427778 SCN7AQ01118 1682 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms