RNA–Protein interactions for RNA: ENST00000426909.1

SYNC-204, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-204ENST00000426909 ITPK1Q13572 414 aa14.08□□□□□ -0.16
SYNC-204ENST00000426909 C20orf194Q5TEA3 1177 aa14.08□□□□□ -0.16
SYNC-204ENST00000426909 TTC5Q8N0Z6 440 aa14.08□□□□□ -0.16
SYNC-204ENST00000426909 PPP1R1BQ9UD71 204 aaPredicted RBP14.08□□□□□ -0.16
SYNC-204ENST00000426909 VIRMAQ69YN4 1812 aaKnown RBP14.08□□□□□ -0.16
SYNC-204ENST00000426909 CEMIPQ8WUJ3 1361 aa14.08□□□□□ -0.16
SYNC-204ENST00000426909 ATF5Q9Y2D1 282 aaPredicted RBP14.07□□□□□ -0.16
SYNC-204ENST00000426909 TUBGCP6Q96RT7 1819 aa14.06□□□□□ -0.16
SYNC-204ENST00000426909 TCERG1O14776 1098 aaKnown RBP14.06□□□□□ -0.16
SYNC-204ENST00000426909 SSFA2P28290 1259 aa14.06□□□□□ -0.16
SYNC-204ENST00000426909 CENPQQ7L2Z9 268 aaPredicted RBP14.06□□□□□ -0.16
SYNC-204ENST00000426909 SLC4A9Q96Q91 983 aa14.06□□□□□ -0.16
SYNC-204ENST00000426909 RBM19Q9Y4C8 960 aaKnown RBP14.06□□□□□ -0.16
SYNC-204ENST00000426909 CICQ96RK0 1608 aaPredicted RBP14.05□□□□□ -0.16
SYNC-204ENST00000426909 GNPATO15228 680 aa14.05□□□□□ -0.16
SYNC-204ENST00000426909 GNAI1P63096 354 aa14.05□□□□□ -0.16
SYNC-204ENST00000426909 SLC39A6Q13433 755 aa14.05□□□□□ -0.16
SYNC-204ENST00000426909 MCM10Q7L590 875 aa14.05□□□□□ -0.16
SYNC-204ENST00000426909 COL23A1Q86Y22 540 aaPredicted RBP14.05□□□□□ -0.16
SYNC-204ENST00000426909 IFT57Q9NWB7 429 aa14.05□□□□□ -0.16
SYNC-204ENST00000426909 CNTNAP4Q9C0A0 1308 aa14.05□□□□□ -0.16
SYNC-204ENST00000426909 COL5A3P25940 1745 aaPredicted RBP14.04□□□□□ -0.16
SYNC-204ENST00000426909 BTBD11A6QL63 1104 aa14.04□□□□□ -0.16
SYNC-204ENST00000426909 PHF14O94880 888 aa14.04□□□□□ -0.16
SYNC-204ENST00000426909 POLD1P28340 1107 aa14.04□□□□□ -0.16
SYNC-204ENST00000426909 PTGER2P43116 358 aa14.04□□□□□ -0.16
SYNC-204ENST00000426909 ALDH1L2Q3SY69 923 aa14.04□□□□□ -0.16
SYNC-204ENST00000426909 RC3H1Q5TC82 1133 aaKnown RBP14.04□□□□□ -0.16
SYNC-204ENST00000426909 ZNF790Q6PG37 636 aa14.04□□□□□ -0.16
SYNC-204ENST00000426909 VSIG10Q8N0Z9 540 aa14.04□□□□□ -0.16
SYNC-204ENST00000426909 RTCBQ9Y3I0 505 aaKnown RBP14.04□□□□□ -0.16
SYNC-204ENST00000426909 KCPQ6ZWJ8 1503 aa14.04□□□□□ -0.16
SYNC-204ENST00000426909 SIPA1L3O60292 1781 aaPredicted RBP14.04□□□□□ -0.16
SYNC-204ENST00000426909 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.03□□□□□ -0.16
SYNC-204ENST00000426909 EXOSC9Q06265 439 aaKnown RBP14.03□□□□□ -0.16
SYNC-204ENST00000426909 ZKSCAN2Q63HK3 967 aa14.03□□□□□ -0.16
SYNC-204ENST00000426909 KDM2BQ8NHM5 1336 aa14.03□□□□□ -0.16
SYNC-204ENST00000426909 TJP1Q07157 1748 aa14.03□□□□□ -0.16
SYNC-204ENST00000426909 DLG5Q8TDM6 1919 aa14.03□□□□□ -0.16
SYNC-204ENST00000426909 UBR3Q6ZT12 1888 aa14.02□□□□□ -0.16
SYNC-204ENST00000426909 UBR2Q8IWV8 1755 aa14.02□□□□□ -0.16
SYNC-204ENST00000426909 KIF16BQ96L93 1317 aa14.02□□□□□ -0.17
SYNC-204ENST00000426909 ADRA2BP18089 450 aa14.02□□□□□ -0.17
SYNC-204ENST00000426909 BRPF1P55201 1214 aaPredicted RBP14.02□□□□□ -0.17
SYNC-204ENST00000426909 TRAPPC3LQ5T215 181 aa14.02□□□□□ -0.17
SYNC-204ENST00000426909 TSR2Q969E8 191 aaKnown RBP14.02□□□□□ -0.17
SYNC-204ENST00000426909 FMNL2Q96PY5 1086 aa14.02□□□□□ -0.17
SYNC-204ENST00000426909 SGIP1Q9BQI5 828 aa14.02□□□□□ -0.17
SYNC-204ENST00000426909 IPO8O15397 1037 aaKnown RBP14.01□□□□□ -0.17
SYNC-204ENST00000426909 ZNF853P0CG23 659 aa14.01□□□□□ -0.17
SYNC-204ENST00000426909 CRKLP46109 303 aaKnown RBP14.01□□□□□ -0.17
SYNC-204ENST00000426909 DCTN1Q14203 1278 aa14.01□□□□□ -0.17
SYNC-204ENST00000426909 CFAP44Q96MT7 982 aa14.01□□□□□ -0.17
SYNC-204ENST00000426909 ARXQ96QS3 562 aa14.01□□□□□ -0.17
SYNC-204ENST00000426909 TEX13AQ9BXU3 409 aaPredicted RBP14.01□□□□□ -0.17
SYNC-204ENST00000426909 RPS6KA4O75676 772 aa14□□□□□ -0.17
SYNC-204ENST00000426909 TAF7Q15545 349 aaPredicted RBP14□□□□□ -0.17
SYNC-204ENST00000426909 AMIGO3Q86WK7 504 aa14□□□□□ -0.17
SYNC-204ENST00000426909 DNAJC10Q8IXB1 793 aa14□□□□□ -0.17
SYNC-204ENST00000426909 FRAT1Q92837 279 aaPredicted RBP14□□□□□ -0.17
SYNC-204ENST00000426909 ZNF496Q96IT1 587 aaPredicted RBP14□□□□□ -0.17
SYNC-204ENST00000426909 SMC4Q9NTJ3 1288 aa14□□□□□ -0.17
SYNC-204ENST00000426909 CCDC87Q9NVE4 849 aa14□□□□□ -0.17
SYNC-204ENST00000426909 HEG1Q9ULI3 1381 aa13.99□□□□□ -0.17
SYNC-204ENST00000426909 COL24A1Q17RW2 1714 aa13.99□□□□□ -0.17
SYNC-204ENST00000426909 STARD3NLO95772 234 aa13.99□□□□□ -0.17
SYNC-204ENST00000426909 CLUAP1Q96AJ1 413 aa13.99□□□□□ -0.17
SYNC-204ENST00000426909 CYP19A1P11511 503 aaPredicted RBP13.98□□□□□ -0.17
SYNC-204ENST00000426909 RFC4P35249 363 aa13.98□□□□□ -0.17
SYNC-204ENST00000426909 SMIM5Q71RC9 77 aa13.98□□□□□ -0.17
SYNC-204ENST00000426909 MSL1Q68DK7 614 aa13.97□□□□□ -0.17
SYNC-204ENST00000426909 INTS5Q6P9B9 1019 aaKnown RBP13.97□□□□□ -0.17
SYNC-204ENST00000426909 DZIP1LQ8IYY4 767 aaKnown RBP13.97□□□□□ -0.17
SYNC-204ENST00000426909 SSH1Q8WYL5 1049 aa13.97□□□□□ -0.17
SYNC-204ENST00000426909 ARHGEF1Q92888 912 aaKnown RBP13.97□□□□□ -0.17
SYNC-204ENST00000426909 MVPQ14764 893 aaKnown RBP13.96□□□□□ -0.17
SYNC-204ENST00000426909 ATF7IPQ6VMQ6 1270 aa13.96□□□□□ -0.17
SYNC-204ENST00000426909 FTSJ3Q8IY81 847 aaKnown RBP13.96□□□□□ -0.17
SYNC-204ENST00000426909 PANK1Q8TE04 598 aa13.96□□□□□ -0.17
SYNC-204ENST00000426909 ARHGAP45Q92619 1136 aa13.96□□□□□ -0.17
SYNC-204ENST00000426909 FHDC1Q9C0D6 1143 aaPredicted RBP13.96□□□□□ -0.17
SYNC-204ENST00000426909 CHMP4BQ9H444 224 aaKnown RBP13.96□□□□□ -0.17
SYNC-204ENST00000426909 COG6Q9Y2V7 657 aa13.96□□□□□ -0.17
SYNC-204ENST00000426909 KCNQ3O43525 872 aa13.95□□□□□ -0.18
SYNC-204ENST00000426909 SNRPA1P09661 255 aaKnown RBP13.95□□□□□ -0.18
SYNC-204ENST00000426909 NLGN1Q8N2Q7 840 aa13.95□□□□□ -0.18
SYNC-204ENST00000426909 THUMPD2Q9BTF0 503 aaKnown RBP13.95□□□□□ -0.18
SYNC-204ENST00000426909 MBIPQ9NS73 344 aa13.95□□□□□ -0.18
SYNC-204ENST00000426909 ZBTB1Q9Y2K1 713 aa13.95□□□□□ -0.18
SYNC-204ENST00000426909 SOS1Q07889 1333 aaPredicted RBP13.94□□□□□ -0.18
SYNC-204ENST00000426909 DCAF8L1A6NGE4 600 aa13.94□□□□□ -0.18
SYNC-204ENST00000426909 VAMP4O75379 141 aa13.94□□□□□ -0.18
SYNC-204ENST00000426909 NPM2Q86SE8 214 aaKnown RBP13.94□□□□□ -0.18
SYNC-204ENST00000426909 SYT17Q9BSW7 474 aa13.94□□□□□ -0.18
SYNC-204ENST00000426909 BCL2L13Q9BXK5 485 aa13.94□□□□□ -0.18
SYNC-204ENST00000426909 BABAM1Q9NWV8 329 aa13.94□□□□□ -0.18
SYNC-204ENST00000426909 MIS18AQ9NYP9 233 aa13.94□□□□□ -0.18
SYNC-204ENST00000426909 DDX19BQ9UMR2 479 aa13.94□□□□□ -0.18
SYNC-204ENST00000426909 LAS1LQ9Y4W2 734 aaKnown RBP13.94□□□□□ -0.18
SYNC-204ENST00000426909 MYH14Q7Z406 1995 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms