RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 KHSRPQ92945 711 aaKnown RBP eCLIP11.57□□□□□ -0.56
CLCN3P1-201ENST00000423965 KCPQ6ZWJ8 1503 aa11.56□□□□□ -0.56
CLCN3P1-201ENST00000423965 PIK3C2AO00443 1686 aa11.56□□□□□ -0.56
CLCN3P1-201ENST00000423965 FAM205CA6NFA0 338 aa11.56□□□□□ -0.56
CLCN3P1-201ENST00000423965 VEGFAP15692 232 aaPredicted RBP11.56□□□□□ -0.56
CLCN3P1-201ENST00000423965 SRPK2P78362 688 aaKnown RBP11.56□□□□□ -0.56
CLCN3P1-201ENST00000423965 AIDAQ96BJ3 306 aa11.56□□□□□ -0.56
CLCN3P1-201ENST00000423965 PCDHGA4Q9Y5G9 962 aa11.56□□□□□ -0.56
CLCN3P1-201ENST00000423965 NSD2O96028 1365 aa11.55□□□□□ -0.56
CLCN3P1-201ENST00000423965 MFSD10Q14728 455 aa11.55□□□□□ -0.56
CLCN3P1-201ENST00000423965 CABP1Q9NZU7 370 aa11.55□□□□□ -0.56
CLCN3P1-201ENST00000423965 A0A0G2JLW4 131 aa11.54□□□□□ -0.56
CLCN3P1-201ENST00000423965 FCHSD2O94868 740 aa11.54□□□□□ -0.56
CLCN3P1-201ENST00000423965 PLCB2Q00722 1185 aa11.54□□□□□ -0.56
CLCN3P1-201ENST00000423965 PDE4DIPQ5VU43 2346 aa11.54□□□□□ -0.56
CLCN3P1-201ENST00000423965 TBC1D12O60347 775 aa11.53□□□□□ -0.56
CLCN3P1-201ENST00000423965 NUDT7P0C024 238 aa11.53□□□□□ -0.56
CLCN3P1-201ENST00000423965 AK7Q96M32 723 aa11.53□□□□□ -0.56
CLCN3P1-201ENST00000423965 TSHZ2Q9NRE2 1034 aa11.53□□□□□ -0.56
CLCN3P1-201ENST00000423965 ZC3H4Q9UPT8 1303 aaKnown RBP11.53□□□□□ -0.56
CLCN3P1-201ENST00000423965 NSD3Q9BZ95 1437 aa11.52□□□□□ -0.56
CLCN3P1-201ENST00000423965 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.52□□□□□ -0.57
CLCN3P1-201ENST00000423965 SSFA2P28290 1259 aa11.52□□□□□ -0.57
CLCN3P1-201ENST00000423965 ANKRD24Q8TF21 1146 aa11.52□□□□□ -0.57
CLCN3P1-201ENST00000423965 PTCD2Q8WV60 388 aaKnown RBP11.52□□□□□ -0.57
CLCN3P1-201ENST00000423965 RNF181Q9P0P0 153 aa11.52□□□□□ -0.57
CLCN3P1-201ENST00000423965 KDM2AQ9Y2K7 1162 aa11.52□□□□□ -0.57
CLCN3P1-201ENST00000423965 TTC21BQ7Z4L5 1316 aa11.52□□□□□ -0.57
CLCN3P1-201ENST00000423965 TTC21AQ8NDW8 1320 aa11.52□□□□□ -0.57
CLCN3P1-201ENST00000423965 TNRC6CQ9HCJ0 1690 aaKnown RBP11.52□□□□□ -0.57
CLCN3P1-201ENST00000423965 KIAA1210Q9ULL0 1709 aa11.52□□□□□ -0.57
CLCN3P1-201ENST00000423965 CCDC85CA6NKD9 419 aa11.51□□□□□ -0.57
CLCN3P1-201ENST00000423965 LBX1P52954 281 aa11.51□□□□□ -0.57
CLCN3P1-201ENST00000423965 DCAF11Q8TEB1 546 aa11.51□□□□□ -0.57
CLCN3P1-201ENST00000423965 WDR70Q9NW82 654 aa11.51□□□□□ -0.57
CLCN3P1-201ENST00000423965 WBP1LQ9NX94 342 aa11.51□□□□□ -0.57
CLCN3P1-201ENST00000423965 MKRN1Q9UHC7 482 aaKnown RBP11.51□□□□□ -0.57
CLCN3P1-201ENST00000423965 GLTPD2A6NH11 291 aa11.5□□□□□ -0.57
CLCN3P1-201ENST00000423965 MMP10P09238 476 aa11.5□□□□□ -0.57
CLCN3P1-201ENST00000423965 HS3ST6Q96QI5 342 aa11.5□□□□□ -0.57
CLCN3P1-201ENST00000423965 NFAT5O94916 1531 aa11.5□□□□□ -0.57
CLCN3P1-201ENST00000423965 USP54Q70EL1 1684 aa11.49□□□□□ -0.57
CLCN3P1-201ENST00000423965 DPEP1P16444 411 aa11.49□□□□□ -0.57
CLCN3P1-201ENST00000423965 DCAF5Q96JK2 942 aa11.49□□□□□ -0.57
CLCN3P1-201ENST00000423965 PHF14O94880 888 aa11.48□□□□□ -0.57
CLCN3P1-201ENST00000423965 AMIGO3Q86WK7 504 aa11.48□□□□□ -0.57
CLCN3P1-201ENST00000423965 CDAN1Q8IWY9 1227 aa11.48□□□□□ -0.57
CLCN3P1-201ENST00000423965 ZCRB1Q8TBF4 217 aaKnown RBP11.48□□□□□ -0.57
CLCN3P1-201ENST00000423965 PIM2Q9P1W9 311 aa11.48□□□□□ -0.57
CLCN3P1-201ENST00000423965 CNTNAP1P78357 1384 aa11.48□□□□□ -0.57
CLCN3P1-201ENST00000423965 KIF13BQ9NQT8 1826 aa11.48□□□□□ -0.57
CLCN3P1-201ENST00000423965 C5P01031 1676 aa11.47□□□□□ -0.57
CLCN3P1-201ENST00000423965 KCNA3P22001 575 aa11.47□□□□□ -0.57
CLCN3P1-201ENST00000423965 VARS2Q5ST30 1063 aaKnown RBP11.47□□□□□ -0.57
CLCN3P1-201ENST00000423965 SMIM5Q71RC9 77 aa11.47□□□□□ -0.57
CLCN3P1-201ENST00000423965 NLGN1Q8N2Q7 840 aa11.47□□□□□ -0.57
CLCN3P1-201ENST00000423965 OXER1Q8TDS5 423 aa11.47□□□□□ -0.57
CLCN3P1-201ENST00000423965 SMARCC1Q92922 1105 aaPredicted RBP11.47□□□□□ -0.57
CLCN3P1-201ENST00000423965 CCDC87Q9NVE4 849 aa11.47□□□□□ -0.57
CLCN3P1-201ENST00000423965 DALRD3Q5D0E6 543 aaKnown RBP11.46□□□□□ -0.57
CLCN3P1-201ENST00000423965 PKD1L3Q7Z443 1732 aa11.46□□□□□ -0.58
CLCN3P1-201ENST00000423965 PALLDQ8WX93 1383 aa11.45□□□□□ -0.58
CLCN3P1-201ENST00000423965 ZNF316A6NFI3 1004 aaPredicted RBP11.45□□□□□ -0.58
CLCN3P1-201ENST00000423965 HSPA8P11142 646 aaKnown RBP11.45□□□□□ -0.58
CLCN3P1-201ENST00000423965 MAP3K9P80192 1104 aa11.45□□□□□ -0.58
CLCN3P1-201ENST00000423965 N4BP2Q86UW6 1770 aaPredicted RBP11.45□□□□□ -0.58
CLCN3P1-201ENST00000423965 KIAA1551Q9HCM1 1747 aa11.45□□□□□ -0.58
CLCN3P1-201ENST00000423965 QRICH2Q9H0J4 1663 aa11.45□□□□□ -0.58
CLCN3P1-201ENST00000423965 DOT1LQ8TEK3 1739 aa11.44□□□□□ -0.58
CLCN3P1-201ENST00000423965 POTEB3A0JP26 581 aa11.44□□□□□ -0.58
CLCN3P1-201ENST00000423965 VEGFBP49765 207 aa11.44□□□□□ -0.58
CLCN3P1-201ENST00000423965 TMF1P82094 1093 aa11.44□□□□□ -0.58
CLCN3P1-201ENST00000423965 POTEBQ6S5H4 581 aa11.44□□□□□ -0.58
CLCN3P1-201ENST00000423965 LHX6Q9UPM6 363 aa11.44□□□□□ -0.58
CLCN3P1-201ENST00000423965 TAF1LQ8IZX4 1826 aa11.44□□□□□ -0.58
CLCN3P1-201ENST00000423965 ARFGEF1Q9Y6D6 1849 aa11.44□□□□□ -0.58
CLCN3P1-201ENST00000423965 C4BP0C0L5 1744 aa11.43□□□□□ -0.58
CLCN3P1-201ENST00000423965 TNRC18O15417 2968 aaPredicted RBP11.43□□□□□ -0.58
CLCN3P1-201ENST00000423965 USP31Q70CQ4 1352 aa11.43□□□□□ -0.58
CLCN3P1-201ENST00000423965 CENPJQ9HC77 1338 aaPredicted RBP11.43□□□□□ -0.58
CLCN3P1-201ENST00000423965 MAP2K1Q02750 393 aaPredicted RBP11.43□□□□□ -0.58
CLCN3P1-201ENST00000423965 EMILIN3Q9NT22 766 aa11.43□□□□□ -0.58
CLCN3P1-201ENST00000423965 UBR3Q6ZT12 1888 aa11.42□□□□□ -0.58
CLCN3P1-201ENST00000423965 CGNL1Q0VF96 1302 aa11.42□□□□□ -0.58
CLCN3P1-201ENST00000423965 POTECB2RU33 542 aa11.42□□□□□ -0.58
CLCN3P1-201ENST00000423965 LMNB1P20700 586 aa11.42□□□□□ -0.58
CLCN3P1-201ENST00000423965 IP6K1Q92551 441 aa11.42□□□□□ -0.58
CLCN3P1-201ENST00000423965 SBF1O95248 1867 aa11.42□□□□□ -0.58
CLCN3P1-201ENST00000423965 BRCA1P38398 1863 aaKnown RBP11.41□□□□□ -0.58
CLCN3P1-201ENST00000423965 MPRIPQ6WCQ1 1025 aa11.41□□□□□ -0.58
CLCN3P1-201ENST00000423965 PARP3Q9Y6F1 533 aa11.41□□□□□ -0.58
CLCN3P1-201ENST00000423965 KDM6AO15550 1401 aaPredicted RBP11.41□□□□□ -0.58
CLCN3P1-201ENST00000423965 TOGARAM1Q9Y4F4 1720 aa11.4□□□□□ -0.58
CLCN3P1-201ENST00000423965 CAMK2BQ13554 666 aa11.4□□□□□ -0.58
CLCN3P1-201ENST00000423965 TRAPPC3LQ5T215 181 aa11.4□□□□□ -0.58
CLCN3P1-201ENST00000423965 TMEM88BA6NKF7 163 aa11.39□□□□□ -0.59
CLCN3P1-201ENST00000423965 GNPATO15228 680 aa11.39□□□□□ -0.59
CLCN3P1-201ENST00000423965 E2F4Q16254 413 aa11.39□□□□□ -0.59
CLCN3P1-201ENST00000423965 LINC00116Q8NCU8 138 aa11.39□□□□□ -0.59
CLCN3P1-201ENST00000423965 EVC2Q86UK5 1308 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms