RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 PCDH11XQ9BZA7 1347 aa11.19□□□□□ -0.62
SNX20-203ENST00000423026 PCDH11YQ9BZA8 1340 aa11.19□□□□□ -0.62
SNX20-203ENST00000423026 SLC39A6Q13433 755 aa11.19□□□□□ -0.62
SNX20-203ENST00000423026 DDX21Q9NR30 783 aaKnown RBP eCLIP11.19□□□□□ -0.62
SNX20-203ENST00000423026 HDAC5Q9UQL6 1122 aa11.19□□□□□ -0.62
SNX20-203ENST00000423026 ANXA1P04083 346 aa11.18□□□□□ -0.62
SNX20-203ENST00000423026 IL2RBP14784 551 aa11.18□□□□□ -0.62
SNX20-203ENST00000423026 TBC1D32Q96NH3 1257 aa11.18□□□□□ -0.62
SNX20-203ENST00000423026 STRN4Q9NRL3 753 aa11.18□□□□□ -0.62
SNX20-203ENST00000423026 LRRFIP2Q9Y608 721 aaKnown RBP11.18□□□□□ -0.62
SNX20-203ENST00000423026 APBB1O00213 710 aa11.18□□□□□ -0.62
SNX20-203ENST00000423026 MFAP1P55081 439 aaKnown RBP11.18□□□□□ -0.62
SNX20-203ENST00000423026 BECN1Q14457 450 aa11.18□□□□□ -0.62
SNX20-203ENST00000423026 BEND3Q5T5X7 828 aa11.18□□□□□ -0.62
SNX20-203ENST00000423026 KSR2Q6VAB6 950 aa11.18□□□□□ -0.62
SNX20-203ENST00000423026 PLEKHM2Q8IWE5 1019 aa11.18□□□□□ -0.62
SNX20-203ENST00000423026 FMNL2Q96PY5 1086 aa11.18□□□□□ -0.62
SNX20-203ENST00000423026 MRC1P22897 1456 aa11.17□□□□□ -0.62
SNX20-203ENST00000423026 SNRPA1P09661 255 aaKnown RBP11.17□□□□□ -0.62
SNX20-203ENST00000423026 PRAMEF22A3QJZ6 481 aa11.17□□□□□ -0.62
SNX20-203ENST00000423026 SOCS7O14512 581 aa11.17□□□□□ -0.62
SNX20-203ENST00000423026 ALDH1L1O75891 902 aa11.17□□□□□ -0.62
SNX20-203ENST00000423026 GLIPR1L2Q4G1C9 344 aa11.17□□□□□ -0.62
SNX20-203ENST00000423026 C22orf23Q9BZE7 217 aa11.17□□□□□ -0.62
SNX20-203ENST00000423026 MAP3K2Q9Y2U5 619 aa11.17□□□□□ -0.62
SNX20-203ENST00000423026 ADCY9O60503 1353 aa11.17□□□□□ -0.62
SNX20-203ENST00000423026 LARP1Q6PKG0 1096 aaKnown RBP11.16□□□□□ -0.62
SNX20-203ENST00000423026 ZNF496Q96IT1 587 aaPredicted RBP11.16□□□□□ -0.62
SNX20-203ENST00000423026 ERVV-2B6SEH9 535 aa11.16□□□□□ -0.62
SNX20-203ENST00000423026 SMARCA5O60264 1052 aaPredicted RBP11.16□□□□□ -0.62
SNX20-203ENST00000423026 PROSER3Q2NL68 480 aa11.16□□□□□ -0.62
SNX20-203ENST00000423026 TTC22Q5TAA0 569 aa11.16□□□□□ -0.62
SNX20-203ENST00000423026 C16orf71Q8IYS4 520 aaPredicted RBP11.16□□□□□ -0.62
SNX20-203ENST00000423026 LRRCC1Q9C099 1032 aa11.16□□□□□ -0.62
SNX20-203ENST00000423026 C9orf78Q9NZ63 289 aaPredicted RBP11.16□□□□□ -0.62
SNX20-203ENST00000423026 PNMA6EA0A0J9YXQ4 647 aa11.15□□□□□ -0.62
SNX20-203ENST00000423026 CDC45O75419 566 aa11.15□□□□□ -0.62
SNX20-203ENST00000423026 AIMP1Q12904 312 aaKnown RBP11.15□□□□□ -0.62
SNX20-203ENST00000423026 BRPF3Q9ULD4 1205 aa11.15□□□□□ -0.62
SNX20-203ENST00000423026 EXOC6BQ9Y2D4 811 aa11.15□□□□□ -0.62
SNX20-203ENST00000423026 NKX1-1Q15270 411 aaPredicted RBP11.14□□□□□ -0.63
SNX20-203ENST00000423026 RIC3Q7Z5B4 369 aa11.14□□□□□ -0.63
SNX20-203ENST00000423026 DDX54Q8TDD1 881 aaKnown RBP11.14□□□□□ -0.63
SNX20-203ENST00000423026 RAB11FIP3O75154 756 aa11.14□□□□□ -0.63
SNX20-203ENST00000423026 SLC4A3P48751 1232 aa11.14□□□□□ -0.63
SNX20-203ENST00000423026 NEXNQ0ZGT2 675 aa11.14□□□□□ -0.63
SNX20-203ENST00000423026 PDIA6Q15084 440 aa11.14□□□□□ -0.63
SNX20-203ENST00000423026 LINS1Q8NG48 757 aa11.14□□□□□ -0.63
SNX20-203ENST00000423026 SSH3Q8TE77 659 aa11.14□□□□□ -0.63
SNX20-203ENST00000423026 C5P01031 1676 aa11.14□□□□□ -0.63
SNX20-203ENST00000423026 ROBO1Q9Y6N7 1651 aa11.14□□□□□ -0.63
SNX20-203ENST00000423026 NBPF7P0C2Y1 421 aaPredicted RBP11.13□□□□□ -0.63
SNX20-203ENST00000423026 MYL6BP14649 208 aa11.13□□□□□ -0.63
SNX20-203ENST00000423026 HSP90AB4PQ58FF6 505 aa11.13□□□□□ -0.63
SNX20-203ENST00000423026 CASC1Q6TDU7 716 aa11.13□□□□□ -0.63
SNX20-203ENST00000423026 PPP1R42Q7Z4L9 355 aa11.13□□□□□ -0.63
SNX20-203ENST00000423026 BTG4Q9NY30 223 aa11.13□□□□□ -0.63
SNX20-203ENST00000423026 IBTKQ9P2D0 1353 aaPredicted RBP11.13□□□□□ -0.63
SNX20-203ENST00000423026 SRGAP3O43295 1099 aa11.13□□□□□ -0.63
SNX20-203ENST00000423026 GSPT1P15170 499 aaKnown RBP11.13□□□□□ -0.63
SNX20-203ENST00000423026 NFKBIBQ15653 356 aa11.13□□□□□ -0.63
SNX20-203ENST00000423026 TBC1D9Q6ZT07 1266 aa11.13□□□□□ -0.63
SNX20-203ENST00000423026 FAM43AQ8N2R8 423 aa11.13□□□□□ -0.63
SNX20-203ENST00000423026 OSBPL3Q9H4L5 887 aa11.13□□□□□ -0.63
SNX20-203ENST00000423026 USP16Q9Y5T5 823 aa11.13□□□□□ -0.63
SNX20-203ENST00000423026 SURF6O75683 361 aaKnown RBP11.12□□□□□ -0.63
SNX20-203ENST00000423026 POLA2Q14181 598 aa11.12□□□□□ -0.63
SNX20-203ENST00000423026 AHDC1Q5TGY3 1603 aaPredicted RBP11.12□□□□□ -0.63
SNX20-203ENST00000423026 COL14A1Q05707 1796 aaKnown RBP11.12□□□□□ -0.63
SNX20-203ENST00000423026 ILDR2Q71H61 639 aa11.11□□□□□ -0.63
SNX20-203ENST00000423026 COPS6Q7L5N1 327 aa11.11□□□□□ -0.63
SNX20-203ENST00000423026 OTUD7AQ8TE49 926 aaPredicted RBP11.11□□□□□ -0.63
SNX20-203ENST00000423026 XAGE3Q8WTP9 111 aa11.11□□□□□ -0.63
SNX20-203ENST00000423026 GRM8O00222 908 aa11.11□□□□□ -0.63
SNX20-203ENST00000423026 PDE1AP54750 535 aa11.11□□□□□ -0.63
SNX20-203ENST00000423026 ANKRD13DQ6ZTN6 518 aa11.11□□□□□ -0.63
SNX20-203ENST00000423026 ERBB4Q15303 1308 aa11.11□□□□□ -0.63
SNX20-203ENST00000423026 RBM25P49756 843 aaKnown RBP11.1□□□□□ -0.63
SNX20-203ENST00000423026 CWF19L2Q2TBE0 894 aaKnown RBP11.1□□□□□ -0.63
SNX20-203ENST00000423026 SDSP20132 328 aa11.1□□□□□ -0.63
SNX20-203ENST00000423026 MX1P20591 662 aa11.1□□□□□ -0.63
SNX20-203ENST00000423026 MTX1Q13505 466 aa11.1□□□□□ -0.63
SNX20-203ENST00000423026 KIF1BPQ96EK5 621 aa11.1□□□□□ -0.63
SNX20-203ENST00000423026 METTL22Q9BUU2 404 aaPredicted RBP11.1□□□□□ -0.63
SNX20-203ENST00000423026 LAMB4A4D0S4 1761 aa11.1□□□□□ -0.63
SNX20-203ENST00000423026 COL22A1Q8NFW1 1626 aaPredicted RBP11.09□□□□□ -0.63
SNX20-203ENST00000423026 OS9Q13438 667 aaPredicted RBP11.09□□□□□ -0.63
SNX20-203ENST00000423026 TMOD3Q9NYL9 352 aa11.09□□□□□ -0.63
SNX20-203ENST00000423026 UTYO14607 1347 aa11.09□□□□□ -0.63
SNX20-203ENST00000423026 LTBP4Q8N2S1 1624 aa11.09□□□□□ -0.63
SNX20-203ENST00000423026 SHANK3Q9BYB0 1731 aa11.09□□□□□ -0.63
SNX20-203ENST00000423026 MYD88Q99836 296 aa11.09□□□□□ -0.63
SNX20-203ENST00000423026 NEURL1BA8MQ27 555 aa11.08□□□□□ -0.64
SNX20-203ENST00000423026 RHPN1Q8TCX5 695 aa11.08□□□□□ -0.64
SNX20-203ENST00000423026 STAP2Q9UGK3 403 aa11.08□□□□□ -0.64
SNX20-203ENST00000423026 AOX1Q06278 1338 aa11.08□□□□□ -0.64
SNX20-203ENST00000423026 UBR2Q8IWV8 1755 aa11.07□□□□□ -0.64
SNX20-203ENST00000423026 IGKV5-2P06315 115 aa11.07□□□□□ -0.64
SNX20-203ENST00000423026 GCKRQ14397 625 aa11.07□□□□□ -0.64
SNX20-203ENST00000423026 LRP10Q7Z4F1 713 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms