RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ANKRD13DQ6ZTN6 518 aa12.77□□□□□ -0.36
PTCH1-206ENST00000421141 IMMTQ16891 758 aaKnown RBP12.77□□□□□ -0.37
PTCH1-206ENST00000421141 FER1L4A9Z1Z3 1794 aa12.77□□□□□ -0.37
PTCH1-206ENST00000421141 A0A1W2PP64 1363 aa12.77□□□□□ -0.37
PTCH1-206ENST00000421141 TMEM57Q8N5G2 664 aa12.77□□□□□ -0.37
PTCH1-206ENST00000421141 MAP3K5Q99683 1374 aa12.77□□□□□ -0.37
PTCH1-206ENST00000421141 BAG3O95817 575 aa12.77□□□□□ -0.37
PTCH1-206ENST00000421141 ORAI2Q96SN7 254 aa12.77□□□□□ -0.37
PTCH1-206ENST00000421141 NUCB2P80303 420 aa12.76□□□□□ -0.37
PTCH1-206ENST00000421141 FAM98CQ17RN3 349 aaKnown RBP12.76□□□□□ -0.37
PTCH1-206ENST00000421141 TRAPPC3LQ5T215 181 aa12.76□□□□□ -0.37
PTCH1-206ENST00000421141 CHD1LQ86WJ1 897 aa12.76□□□□□ -0.37
PTCH1-206ENST00000421141 OGFOD1Q8N543 542 aa12.76□□□□□ -0.37
PTCH1-206ENST00000421141 TTF1Q15361 905 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-206ENST00000421141 NFATC2IPQ8NCF5 419 aa12.76□□□□□ -0.37
PTCH1-206ENST00000421141 CYP46A1Q9Y6A2 500 aa12.76□□□□□ -0.37
PTCH1-206ENST00000421141 TPTE2Q6XPS3 522 aa12.76□□□□□ -0.37
PTCH1-206ENST00000421141 ZGPATQ8N5A5 531 aaKnown RBP12.76□□□□□ -0.37
PTCH1-206ENST00000421141 NIP7Q9Y221 180 aaKnown RBP eCLIP12.76□□□□□ -0.37
PTCH1-206ENST00000421141 IL16Q14005 1332 aa12.76□□□□□ -0.37
PTCH1-206ENST00000421141 EIF4A2Q14240 407 aaKnown RBP12.76□□□□□ -0.37
PTCH1-206ENST00000421141 ZNF772Q68DY9 489 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-206ENST00000421141 NUP133Q8WUM0 1156 aa12.76□□□□□ -0.37
PTCH1-206ENST00000421141 KRT32Q14532 448 aa12.76□□□□□ -0.37
PTCH1-206ENST00000421141 LDHAL6AQ6ZMR3 332 aa12.76□□□□□ -0.37
PTCH1-206ENST00000421141 CCDC73Q6ZRK6 1079 aa12.76□□□□□ -0.37
PTCH1-206ENST00000421141 UBE3BQ7Z3V4 1068 aa12.76□□□□□ -0.37
PTCH1-206ENST00000421141 SEC63Q9UGP8 760 aaKnown RBP12.76□□□□□ -0.37
PTCH1-206ENST00000421141 U3KPZ7 1027 aaPredicted RBP12.75□□□□□ -0.37
PTCH1-206ENST00000421141 GLRX3O76003 335 aaKnown RBP12.75□□□□□ -0.37
PTCH1-206ENST00000421141 ANKRD18AQ8IVF6 992 aa12.75□□□□□ -0.37
PTCH1-206ENST00000421141 HDAC9Q9UKV0 1011 aa12.75□□□□□ -0.37
PTCH1-206ENST00000421141 ARAP3Q8WWN8 1544 aa12.75□□□□□ -0.37
PTCH1-206ENST00000421141 PLEKHG1Q9ULL1 1385 aa12.75□□□□□ -0.37
PTCH1-206ENST00000421141 IQGAP3Q86VI3 1631 aa12.75□□□□□ -0.37
PTCH1-206ENST00000421141 GSTO1P78417 241 aa12.74□□□□□ -0.37
PTCH1-206ENST00000421141 DZIP3Q86Y13 1208 aaKnown RBP12.74□□□□□ -0.37
PTCH1-206ENST00000421141 NAPBQ9H115 298 aa12.74□□□□□ -0.37
PTCH1-206ENST00000421141 CLASP1Q7Z460 1538 aa12.74□□□□□ -0.37
PTCH1-206ENST00000421141 IPO7O95373 1038 aaKnown RBP12.74□□□□□ -0.37
PTCH1-206ENST00000421141 UTP14AQ9BVJ6 771 aaKnown RBP12.74□□□□□ -0.37
PTCH1-206ENST00000421141 DDX49Q9Y6V7 483 aaKnown RBP12.74□□□□□ -0.37
PTCH1-206ENST00000421141 HOXC9P31274 260 aa12.74□□□□□ -0.37
PTCH1-206ENST00000421141 LRRFIP2Q9Y608 721 aaKnown RBP12.74□□□□□ -0.37
PTCH1-206ENST00000421141 RIMS1Q86UR5 1692 aaKnown RBP12.74□□□□□ -0.37
PTCH1-206ENST00000421141 CAMSAP1Q5T5Y3 1602 aa12.74□□□□□ -0.37
PTCH1-206ENST00000421141 ATP5J2-PTCD1G3V325 749 aa12.74□□□□□ -0.37
PTCH1-206ENST00000421141 CWC27Q6UX04 472 aaKnown RBP12.74□□□□□ -0.37
PTCH1-206ENST00000421141 SSH1Q8WYL5 1049 aa12.74□□□□□ -0.37
PTCH1-206ENST00000421141 GNPATO15228 680 aa12.74□□□□□ -0.37
PTCH1-206ENST00000421141 SBNO1A3KN83 1393 aa12.74□□□□□ -0.37
PTCH1-206ENST00000421141 KDM4AO75164 1064 aa12.74□□□□□ -0.37
PTCH1-206ENST00000421141 LDHCP07864 332 aa12.74□□□□□ -0.37
PTCH1-206ENST00000421141 FBLN1P23142 703 aa12.74□□□□□ -0.37
PTCH1-206ENST00000421141 CCNL1Q9UK58 526 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-206ENST00000421141 IL1RAPL2Q9NP60 686 aa12.73□□□□□ -0.37
PTCH1-206ENST00000421141 PDE4CQ08493 712 aa12.73□□□□□ -0.37
PTCH1-206ENST00000421141 PDZRN3Q9UPQ7 1066 aa12.73□□□□□ -0.37
PTCH1-206ENST00000421141 ZNF76P36508 570 aa12.73□□□□□ -0.37
PTCH1-206ENST00000421141 ERVK-7P63135 1459 aa12.73□□□□□ -0.37
PTCH1-206ENST00000421141 HLA-DOAP06340 250 aa12.73□□□□□ -0.37
PTCH1-206ENST00000421141 ZNF444Q8N0Y2 327 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-206ENST00000421141 CHPF2Q9P2E5 772 aa12.73□□□□□ -0.37
PTCH1-206ENST00000421141 FAM83GA6ND36 823 aa12.73□□□□□ -0.37
PTCH1-206ENST00000421141 MINDY4BA8MYZ0 360 aa12.73□□□□□ -0.37
PTCH1-206ENST00000421141 BAG6P46379 1132 aa12.73□□□□□ -0.37
PTCH1-206ENST00000421141 JDP2Q8WYK2 163 aa12.73□□□□□ -0.37
PTCH1-206ENST00000421141 KRT18P05783 430 aaKnown RBP12.73□□□□□ -0.37
PTCH1-206ENST00000421141 EXOC6BQ9Y2D4 811 aa12.73□□□□□ -0.37
PTCH1-206ENST00000421141 GOLGA6L3A6NEY3 463 aa12.72□□□□□ -0.37
PTCH1-206ENST00000421141 PI4KAP2A4QPH2 592 aa12.72□□□□□ -0.37
PTCH1-206ENST00000421141 PI4KAP1Q8N8J0 262 aa12.72□□□□□ -0.37
PTCH1-206ENST00000421141 MBIPQ9NS73 344 aa12.72□□□□□ -0.37
PTCH1-206ENST00000421141 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-206ENST00000421141 LMOD1P29536 600 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-206ENST00000421141 OLFM4Q6UX06 510 aa12.72□□□□□ -0.37
PTCH1-206ENST00000421141 ZNF396Q96N95 335 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-206ENST00000421141 CLEC11AQ9Y240 323 aa12.72□□□□□ -0.37
PTCH1-206ENST00000421141 F6X3S4 739 aa12.72□□□□□ -0.37
PTCH1-206ENST00000421141 TNIP1Q15025 636 aa12.72□□□□□ -0.37
PTCH1-206ENST00000421141 SASS6Q6UVJ0 657 aa12.72□□□□□ -0.37
PTCH1-206ENST00000421141 ZNF804AQ7Z570 1209 aa12.72□□□□□ -0.37
PTCH1-206ENST00000421141 NEK4P51957 841 aa12.71□□□□□ -0.37
PTCH1-206ENST00000421141 SLC39A6Q13433 755 aa12.71□□□□□ -0.37
PTCH1-206ENST00000421141 LTKP29376 864 aa12.71□□□□□ -0.37
PTCH1-206ENST00000421141 RABEP1Q15276 862 aa12.71□□□□□ -0.37
PTCH1-206ENST00000421141 FEZ1Q99689 392 aa12.71□□□□□ -0.37
PTCH1-206ENST00000421141 NAT10Q9H0A0 1025 aaKnown RBP12.71□□□□□ -0.37
PTCH1-206ENST00000421141 JMYQ8N9B5 988 aa12.71□□□□□ -0.38
PTCH1-206ENST00000421141 WASF1Q92558 559 aa12.71□□□□□ -0.38
PTCH1-206ENST00000421141 BLOC1S2Q6QNY1 142 aa12.71□□□□□ -0.38
PTCH1-206ENST00000421141 POLKQ9UBT6 870 aa12.71□□□□□ -0.38
PTCH1-206ENST00000421141 ZC3H13Q5T200 1668 aaKnown RBP12.7□□□□□ -0.38
PTCH1-206ENST00000421141 NF2P35240 595 aa12.7□□□□□ -0.38
PTCH1-206ENST00000421141 TMEM94Q12767 1356 aa12.7□□□□□ -0.38
PTCH1-206ENST00000421141 IQCA1Q86XH1 822 aa12.7□□□□□ -0.38
PTCH1-206ENST00000421141 TRPC5Q9UL62 973 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-206ENST00000421141 APBA3O96018 575 aa12.7□□□□□ -0.38
PTCH1-206ENST00000421141 RARSP54136 660 aaKnown RBP12.7□□□□□ -0.38
PTCH1-206ENST00000421141 ABCC3O15438 1527 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms