RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 MTHFSDQ2M296 383 aaKnown RBP22.86■■□□□ 1.25
UPF3AP3-201ENST00000420996 NARFQ9UHQ1 456 aa22.86■■□□□ 1.25
UPF3AP3-201ENST00000420996 AFDNP55196 1824 aaKnown RBP22.86■■□□□ 1.25
UPF3AP3-201ENST00000420996 DIAPH1O60610 1272 aaKnown RBP22.85■■□□□ 1.25
UPF3AP3-201ENST00000420996 VSIG10Q8N0Z9 540 aa22.85■■□□□ 1.25
UPF3AP3-201ENST00000420996 RBM46Q8TBY0 533 aaKnown RBP22.85■■□□□ 1.25
UPF3AP3-201ENST00000420996 RNF181Q9P0P0 153 aa22.85■■□□□ 1.25
UPF3AP3-201ENST00000420996 COL15A1P39059 1388 aa22.85■■□□□ 1.25
UPF3AP3-201ENST00000420996 PER1O15534 1290 aaPredicted RBP22.84■■□□□ 1.25
UPF3AP3-201ENST00000420996 KDM2BQ8NHM5 1336 aa22.83■■□□□ 1.25
UPF3AP3-201ENST00000420996 NRXN2Q9P2S2 1712 aa22.83■■□□□ 1.25
UPF3AP3-201ENST00000420996 NFIXQ14938 502 aa22.83■■□□□ 1.25
UPF3AP3-201ENST00000420996 C16orf71Q8IYS4 520 aaPredicted RBP22.83■■□□□ 1.25
UPF3AP3-201ENST00000420996 DNAJC5GQ8N7S2 189 aa22.83■■□□□ 1.25
UPF3AP3-201ENST00000420996 ZBTB1Q9Y2K1 713 aa22.83■■□□□ 1.25
UPF3AP3-201ENST00000420996 UBR2Q8IWV8 1755 aa22.82■■□□□ 1.24
UPF3AP3-201ENST00000420996 SERPINB2P05120 415 aa22.8■■□□□ 1.24
UPF3AP3-201ENST00000420996 CC2D1BQ5T0F9 858 aaKnown RBP22.8■■□□□ 1.24
UPF3AP3-201ENST00000420996 BCL2L12Q9HB09 334 aa22.8■■□□□ 1.24
UPF3AP3-201ENST00000420996 DLEC1Q9Y238 1755 aa22.8■■□□□ 1.24
UPF3AP3-201ENST00000420996 TNRC6CQ9HCJ0 1690 aaKnown RBP22.79■■□□□ 1.24
UPF3AP3-201ENST00000420996 FSTL1Q12841 308 aa22.79■■□□□ 1.24
UPF3AP3-201ENST00000420996 WDR90Q96KV7 1748 aa22.79■■□□□ 1.24
UPF3AP3-201ENST00000420996 STARD3NLO95772 234 aa22.78■■□□□ 1.24
UPF3AP3-201ENST00000420996 TTC5Q8N0Z6 440 aa22.78■■□□□ 1.24
UPF3AP3-201ENST00000420996 RRAGCQ9HB90 399 aa22.78■■□□□ 1.24
UPF3AP3-201ENST00000420996 CANXP27824 592 aaKnown RBP22.77■■□□□ 1.24
UPF3AP3-201ENST00000420996 ZC3H4Q9UPT8 1303 aaKnown RBP22.77■■□□□ 1.24
UPF3AP3-201ENST00000420996 EIF5P55010 431 aaKnown RBP22.76■■□□□ 1.23
UPF3AP3-201ENST00000420996 TTLL6Q8N841 843 aa22.76■■□□□ 1.23
UPF3AP3-201ENST00000420996 A0A087WZG4 1122 aa22.75■■□□□ 1.23
UPF3AP3-201ENST00000420996 NPC1L1Q9UHC9 1359 aa22.75■■□□□ 1.23
UPF3AP3-201ENST00000420996 COL3A1P02461 1466 aaPredicted RBP22.74■■□□□ 1.23
UPF3AP3-201ENST00000420996 LMNB1P20700 586 aa22.74■■□□□ 1.23
UPF3AP3-201ENST00000420996 RASSF7Q02833 373 aa22.74■■□□□ 1.23
UPF3AP3-201ENST00000420996 C2CD5Q86YS7 1000 aa22.74■■□□□ 1.23
UPF3AP3-201ENST00000420996 TEX13AQ9BXU3 409 aaPredicted RBP22.74■■□□□ 1.23
UPF3AP3-201ENST00000420996 CCDC88AQ3V6T2 1871 aa22.73■■□□□ 1.23
UPF3AP3-201ENST00000420996 GNAT3A8MTJ3 354 aa22.73■■□□□ 1.23
UPF3AP3-201ENST00000420996 H0YIN7 160 aa22.73■■□□□ 1.23
UPF3AP3-201ENST00000420996 TEFQ10587 303 aa22.73■■□□□ 1.23
UPF3AP3-201ENST00000420996 ZNF790Q6PG37 636 aa22.73■■□□□ 1.23
UPF3AP3-201ENST00000420996 IL17REQ8NFR9 667 aa22.73■■□□□ 1.23
UPF3AP3-201ENST00000420996 GAS2L2Q8NHY3 880 aa22.73■■□□□ 1.23
UPF3AP3-201ENST00000420996 ZNF496Q96IT1 587 aaPredicted RBP22.73■■□□□ 1.23
UPF3AP3-201ENST00000420996 SIPA1L3O60292 1781 aaPredicted RBP22.73■■□□□ 1.23
UPF3AP3-201ENST00000420996 U2SURPO15042 1029 aaKnown RBP22.72■■□□□ 1.23
UPF3AP3-201ENST00000420996 BICDL1Q6ZP65 573 aa22.72■■□□□ 1.23
UPF3AP3-201ENST00000420996 HEG1Q9ULI3 1381 aa22.72■■□□□ 1.23
UPF3AP3-201ENST00000420996 CARMIL3Q8ND23 1372 aa22.71■■□□□ 1.23
UPF3AP3-201ENST00000420996 GLTPD2A6NH11 291 aa22.7■■□□□ 1.22
UPF3AP3-201ENST00000420996 PRELPP51888 382 aa22.7■■□□□ 1.22
UPF3AP3-201ENST00000420996 KLRG1Q96E93 195 aa22.7■■□□□ 1.22
UPF3AP3-201ENST00000420996 PDZRN3Q9UPQ7 1066 aa22.7■■□□□ 1.22
UPF3AP3-201ENST00000420996 ANKRD31Q8N7Z5 1873 aa22.69■■□□□ 1.22
UPF3AP3-201ENST00000420996 SCN7AQ01118 1682 aa22.69■■□□□ 1.22
UPF3AP3-201ENST00000420996 HTRA3P83110 453 aa22.69■■□□□ 1.22
UPF3AP3-201ENST00000420996 TBC1D9BQ66K14 1250 aa22.69■■□□□ 1.22
UPF3AP3-201ENST00000420996 SMC1BQ8NDV3 1235 aa22.69■■□□□ 1.22
UPF3AP3-201ENST00000420996 VEGFAP15692 232 aaPredicted RBP22.68■■□□□ 1.22
UPF3AP3-201ENST00000420996 IL6STP40189 918 aaPredicted RBP22.68■■□□□ 1.22
UPF3AP3-201ENST00000420996 BRIP1Q9BX63 1249 aa22.68■■□□□ 1.22
UPF3AP3-201ENST00000420996 PDE6BP35913 854 aa22.67■■□□□ 1.22
UPF3AP3-201ENST00000420996 CNGB1Q14028 1251 aaPredicted RBP22.67■■□□□ 1.22
UPF3AP3-201ENST00000420996 JMYQ8N9B5 988 aa22.67■■□□□ 1.22
UPF3AP3-201ENST00000420996 FMNL2Q96PY5 1086 aa22.67■■□□□ 1.22
UPF3AP3-201ENST00000420996 TBC1D2BQ9UPU7 963 aa22.67■■□□□ 1.22
UPF3AP3-201ENST00000420996 TIAM2Q8IVF5 1701 aa22.67■■□□□ 1.22
UPF3AP3-201ENST00000420996 CEMIPQ8WUJ3 1361 aa22.66■■□□□ 1.22
UPF3AP3-201ENST00000420996 NFKBIEO00221 500 aa22.66■■□□□ 1.22
UPF3AP3-201ENST00000420996 PRR5LQ6MZQ0 368 aa22.65■■□□□ 1.22
UPF3AP3-201ENST00000420996 ZNF622Q969S3 477 aaKnown RBP eCLIP22.65■■□□□ 1.22
UPF3AP3-201ENST00000420996 ZNF330Q9Y3S2 320 aaPredicted RBP22.65■■□□□ 1.22
UPF3AP3-201ENST00000420996 A1BGP04217 495 aa22.64■■□□□ 1.21
UPF3AP3-201ENST00000420996 NPM2Q86SE8 214 aaKnown RBP22.64■■□□□ 1.21
UPF3AP3-201ENST00000420996 DICER1Q9UPY3 1922 aaKnown RBP22.63■■□□□ 1.21
UPF3AP3-201ENST00000420996 FER1L6Q2WGJ9 1857 aa22.63■■□□□ 1.21
UPF3AP3-201ENST00000420996 PHACTR3Q96KR7 559 aa22.63■■□□□ 1.21
UPF3AP3-201ENST00000420996 COL11A2P13942 1736 aaPredicted RBP22.62■■□□□ 1.21
UPF3AP3-201ENST00000420996 BTBD11A6QL63 1104 aa22.62■■□□□ 1.21
UPF3AP3-201ENST00000420996 CAMTA2O94983 1202 aa22.62■■□□□ 1.21
UPF3AP3-201ENST00000420996 CFAP53Q96M91 514 aa22.62■■□□□ 1.21
UPF3AP3-201ENST00000420996 SETDB2Q96T68 719 aa22.62■■□□□ 1.21
UPF3AP3-201ENST00000420996 KCNQ3O43525 872 aa22.61■■□□□ 1.21
UPF3AP3-201ENST00000420996 C21orf2O43822 256 aa22.61■■□□□ 1.21
UPF3AP3-201ENST00000420996 PRKAR2BP31323 418 aa22.61■■□□□ 1.21
UPF3AP3-201ENST00000420996 DPY19L2Q6NUT2 758 aa22.61■■□□□ 1.21
UPF3AP3-201ENST00000420996 CCDC24Q8N4L8 307 aa22.61■■□□□ 1.21
UPF3AP3-201ENST00000420996 RSPH6AQ9H0K4 717 aa22.61■■□□□ 1.21
UPF3AP3-201ENST00000420996 BCORQ6W2J9 1755 aa22.6■■□□□ 1.21
UPF3AP3-201ENST00000420996 CNBD1Q8NA66 436 aa22.59■■□□□ 1.21
UPF3AP3-201ENST00000420996 POTECB2RU33 542 aa22.58■■□□□ 1.21
UPF3AP3-201ENST00000420996 NPHP1O15259 732 aa22.58■■□□□ 1.21
UPF3AP3-201ENST00000420996 ERFEQ4G0M1 354 aa22.58■■□□□ 1.21
UPF3AP3-201ENST00000420996 DZIP3Q86Y13 1208 aaKnown RBP22.58■■□□□ 1.21
UPF3AP3-201ENST00000420996 CNKSR1Q969H4 720 aa22.58■■□□□ 1.21
UPF3AP3-201ENST00000420996 ZNF219Q9P2Y4 722 aaPredicted RBP22.58■■□□□ 1.21
UPF3AP3-201ENST00000420996 NUDCQ9Y266 331 aa22.58■■□□□ 1.21
UPF3AP3-201ENST00000420996 USP16Q9Y5T5 823 aa22.58■■□□□ 1.21
UPF3AP3-201ENST00000420996 LTBP3Q9NS15 1303 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms