RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 CLSPNQ9HAW4 1339 aa19.48■□□□□ 0.71
NFE4-201ENST00000420058 SBF1O95248 1867 aa19.48■□□□□ 0.71
NFE4-201ENST00000420058 RNMTO43148 476 aaKnown RBP19.47■□□□□ 0.71
NFE4-201ENST00000420058 AMER1Q5JTC6 1135 aaPredicted RBP19.47■□□□□ 0.71
NFE4-201ENST00000420058 NARFQ9UHQ1 456 aa19.47■□□□□ 0.71
NFE4-201ENST00000420058 ZPR1O75312 459 aa19.46■□□□□ 0.71
NFE4-201ENST00000420058 SCN11AQ9UI33 1791 aa19.46■□□□□ 0.71
NFE4-201ENST00000420058 KDM2BQ8NHM5 1336 aa19.46■□□□□ 0.71
NFE4-201ENST00000420058 RASSF7Q02833 373 aa19.45■□□□□ 0.7
NFE4-201ENST00000420058 ZBTB1Q9Y2K1 713 aa19.45■□□□□ 0.7
NFE4-201ENST00000420058 C16orf71Q8IYS4 520 aaPredicted RBP19.44■□□□□ 0.7
NFE4-201ENST00000420058 WDR90Q96KV7 1748 aa19.44■□□□□ 0.7
NFE4-201ENST00000420058 MTHFSDQ2M296 383 aaKnown RBP19.43■□□□□ 0.7
NFE4-201ENST00000420058 COL13A1Q5TAT6 717 aaPredicted RBP19.43■□□□□ 0.7
NFE4-201ENST00000420058 KNSTRNQ9Y448 316 aa19.43■□□□□ 0.7
NFE4-201ENST00000420058 SERPINB2P05120 415 aa19.42■□□□□ 0.7
NFE4-201ENST00000420058 HMOX1P09601 288 aa19.42■□□□□ 0.7
NFE4-201ENST00000420058 PCGF6Q9BYE7 350 aa19.42■□□□□ 0.7
NFE4-201ENST00000420058 MRC1P22897 1456 aa19.41■□□□□ 0.7
NFE4-201ENST00000420058 AFDNP55196 1824 aaKnown RBP19.41■□□□□ 0.7
NFE4-201ENST00000420058 NRXN2Q9P2S2 1712 aa19.4■□□□□ 0.7
NFE4-201ENST00000420058 GLTPD2A6NH11 291 aa19.4■□□□□ 0.7
NFE4-201ENST00000420058 POTECB2RU33 542 aa19.4■□□□□ 0.7
NFE4-201ENST00000420058 VSIG10Q8N0Z9 540 aa19.4■□□□□ 0.7
NFE4-201ENST00000420058 COL15A1P39059 1388 aa19.4■□□□□ 0.7
NFE4-201ENST00000420058 NFKBIEO00221 500 aa19.39■□□□□ 0.69
NFE4-201ENST00000420058 LMNB1P20700 586 aa19.39■□□□□ 0.69
NFE4-201ENST00000420058 EIF5P55010 431 aaKnown RBP19.39■□□□□ 0.69
NFE4-201ENST00000420058 TTLL6Q8N841 843 aa19.39■□□□□ 0.69
NFE4-201ENST00000420058 ZC3H4Q9UPT8 1303 aaKnown RBP19.39■□□□□ 0.69
NFE4-201ENST00000420058 CARMIL3Q8ND23 1372 aa19.39■□□□□ 0.69
NFE4-201ENST00000420058 PER1O15534 1290 aaPredicted RBP19.38■□□□□ 0.69
NFE4-201ENST00000420058 SMC1BQ8NDV3 1235 aa19.38■□□□□ 0.69
NFE4-201ENST00000420058 CANXP27824 592 aaKnown RBP19.37■□□□□ 0.69
NFE4-201ENST00000420058 C2CD5Q86YS7 1000 aa19.37■□□□□ 0.69
NFE4-201ENST00000420058 VEGFAP15692 232 aaPredicted RBP19.36■□□□□ 0.69
NFE4-201ENST00000420058 IL17REQ8NFR9 667 aa19.35■□□□□ 0.69
NFE4-201ENST00000420058 TNRC6CQ9HCJ0 1690 aaKnown RBP19.35■□□□□ 0.69
NFE4-201ENST00000420058 H0YIN7 160 aa19.34■□□□□ 0.69
NFE4-201ENST00000420058 TBC1D9BQ66K14 1250 aa19.34■□□□□ 0.69
NFE4-201ENST00000420058 BICDL1Q6ZP65 573 aa19.34■□□□□ 0.69
NFE4-201ENST00000420058 ZNF496Q96IT1 587 aaPredicted RBP19.33■□□□□ 0.68
NFE4-201ENST00000420058 DLEC1Q9Y238 1755 aa19.32■□□□□ 0.68
NFE4-201ENST00000420058 KIF7Q2M1P5 1343 aa19.32■□□□□ 0.68
NFE4-201ENST00000420058 DIAPH1O60610 1272 aaKnown RBP19.32■□□□□ 0.68
NFE4-201ENST00000420058 CCDC24Q8N4L8 307 aa19.32■□□□□ 0.68
NFE4-201ENST00000420058 STARD3NLO95772 234 aa19.31■□□□□ 0.68
NFE4-201ENST00000420058 BRIP1Q9BX63 1249 aa19.31■□□□□ 0.68
NFE4-201ENST00000420058 UBR2Q8IWV8 1755 aa19.31■□□□□ 0.68
NFE4-201ENST00000420058 VIRMAQ69YN4 1812 aaKnown RBP19.3■□□□□ 0.68
NFE4-201ENST00000420058 PRR5LQ6MZQ0 368 aa19.3■□□□□ 0.68
NFE4-201ENST00000420058 ZNF790Q6PG37 636 aa19.3■□□□□ 0.68
NFE4-201ENST00000420058 TBC1D2BQ9UPU7 963 aa19.3■□□□□ 0.68
NFE4-201ENST00000420058 CCDC88AQ3V6T2 1871 aa19.29■□□□□ 0.68
NFE4-201ENST00000420058 A0A087WZG4 1122 aa19.29■□□□□ 0.68
NFE4-201ENST00000420058 C21orf2O43822 256 aa19.29■□□□□ 0.68
NFE4-201ENST00000420058 HEG1Q9ULI3 1381 aa19.29■□□□□ 0.68
NFE4-201ENST00000420058 ANKRD31Q8N7Z5 1873 aa19.28■□□□□ 0.68
NFE4-201ENST00000420058 A1BGP04217 495 aa19.28■□□□□ 0.68
NFE4-201ENST00000420058 CC2D1BQ5T0F9 858 aaKnown RBP19.28■□□□□ 0.68
NFE4-201ENST00000420058 ZNF622Q969S3 477 aaKnown RBP eCLIP19.28■□□□□ 0.68
NFE4-201ENST00000420058 KCNQ3O43525 872 aa19.27■□□□□ 0.68
NFE4-201ENST00000420058 CAMTA2O94983 1202 aa19.27■□□□□ 0.68
NFE4-201ENST00000420058 IL6STP40189 918 aaPredicted RBP19.27■□□□□ 0.68
NFE4-201ENST00000420058 TTC5Q8N0Z6 440 aa19.27■□□□□ 0.68
NFE4-201ENST00000420058 ZNF219Q9P2Y4 722 aaPredicted RBP19.27■□□□□ 0.68
NFE4-201ENST00000420058 COL3A1P02461 1466 aaPredicted RBP19.27■□□□□ 0.67
NFE4-201ENST00000420058 PDE6BP35913 854 aa19.26■□□□□ 0.67
NFE4-201ENST00000420058 TEX13AQ9BXU3 409 aaPredicted RBP19.26■□□□□ 0.67
NFE4-201ENST00000420058 PDZRN3Q9UPQ7 1066 aa19.26■□□□□ 0.67
NFE4-201ENST00000420058 GNAT3A8MTJ3 354 aa19.25■□□□□ 0.67
NFE4-201ENST00000420058 HSPA1AP0DMV8 641 aaKnown RBP19.25■□□□□ 0.67
NFE4-201ENST00000420058 HSPA1BP0DMV9 641 aaKnown RBP19.25■□□□□ 0.67
NFE4-201ENST00000420058 ERFEQ4G0M1 354 aa19.25■□□□□ 0.67
NFE4-201ENST00000420058 DPY19L2Q6NUT2 758 aa19.25■□□□□ 0.67
NFE4-201ENST00000420058 TNS4Q8IZW8 715 aa19.25■□□□□ 0.67
NFE4-201ENST00000420058 LTBP3Q9NS15 1303 aa19.25■□□□□ 0.67
NFE4-201ENST00000420058 POTEIP0CG38 1075 aa19.24■□□□□ 0.67
NFE4-201ENST00000420058 POTEJP0CG39 1038 aa19.24■□□□□ 0.67
NFE4-201ENST00000420058 SRGNP10124 158 aa19.24■□□□□ 0.67
NFE4-201ENST00000420058 C7orf43Q8WVR3 580 aa19.24■□□□□ 0.67
NFE4-201ENST00000420058 PHACTR3Q96KR7 559 aa19.24■□□□□ 0.67
NFE4-201ENST00000420058 CEMIPQ8WUJ3 1361 aa19.23■□□□□ 0.67
NFE4-201ENST00000420058 FER1L6Q2WGJ9 1857 aa19.23■□□□□ 0.67
NFE4-201ENST00000420058 CAPN15O75808 1086 aa19.23■□□□□ 0.67
NFE4-201ENST00000420058 TEFQ10587 303 aa19.23■□□□□ 0.67
NFE4-201ENST00000420058 USP16Q9Y5T5 823 aa19.23■□□□□ 0.67
NFE4-201ENST00000420058 TIAM2Q8IVF5 1701 aa19.22■□□□□ 0.67
NFE4-201ENST00000420058 DDNO94850 711 aaPredicted RBP19.22■□□□□ 0.67
NFE4-201ENST00000420058 GAS2L2Q8NHY3 880 aa19.22■□□□□ 0.67
NFE4-201ENST00000420058 FMNL2Q96PY5 1086 aa19.22■□□□□ 0.67
NFE4-201ENST00000420058 SETDB2Q96T68 719 aa19.22■□□□□ 0.67
NFE4-201ENST00000420058 ZNF330Q9Y3S2 320 aaPredicted RBP19.22■□□□□ 0.67
NFE4-201ENST00000420058 SLX4Q8IY92 1834 aa19.22■□□□□ 0.67
NFE4-201ENST00000420058 COL11A2P13942 1736 aaPredicted RBP19.22■□□□□ 0.67
NFE4-201ENST00000420058 PRAMEF22A3QJZ6 481 aa19.21■□□□□ 0.67
NFE4-201ENST00000420058 U2SURPO15042 1029 aaKnown RBP19.21■□□□□ 0.67
NFE4-201ENST00000420058 STYK1Q6J9G0 422 aa19.21■□□□□ 0.67
NFE4-201ENST00000420058 DICER1Q9UPY3 1922 aaKnown RBP19.21■□□□□ 0.67
NFE4-201ENST00000420058 SIPA1L3O60292 1781 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms