RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 STAP2Q9UGK3 403 aa18.33■□□□□ 0.52
SEMA3B-203ENST00000419007 SBNO1A3KN83 1393 aa18.32■□□□□ 0.52
SEMA3B-203ENST00000419007 CWC27Q6UX04 472 aaKnown RBP18.32■□□□□ 0.52
SEMA3B-203ENST00000419007 SOS1Q07889 1333 aaPredicted RBP18.32■□□□□ 0.52
SEMA3B-203ENST00000419007 PLCB2Q00722 1185 aa18.32■□□□□ 0.52
SEMA3B-203ENST00000419007 USP31Q70CQ4 1352 aa18.32■□□□□ 0.52
SEMA3B-203ENST00000419007 UQCRHLA0A096LP55 91 aa18.31■□□□□ 0.52
SEMA3B-203ENST00000419007 UQCRHP07919 91 aa18.31■□□□□ 0.52
SEMA3B-203ENST00000419007 SPG7Q9UQ90 795 aa18.31■□□□□ 0.52
SEMA3B-203ENST00000419007 AMOTL2Q9Y2J4 779 aa18.31■□□□□ 0.52
SEMA3B-203ENST00000419007 IGSF1Q8N6C5 1336 aa18.31■□□□□ 0.52
SEMA3B-203ENST00000419007 FER1L4A9Z1Z3 1794 aa18.31■□□□□ 0.52
SEMA3B-203ENST00000419007 TAF7Q15545 349 aaPredicted RBP18.31■□□□□ 0.52
SEMA3B-203ENST00000419007 DNTTIP2Q5QJE6 756 aaKnown RBP18.31■□□□□ 0.52
SEMA3B-203ENST00000419007 PHF14O94880 888 aa18.31■□□□□ 0.52
SEMA3B-203ENST00000419007 CPA1P15085 419 aa18.31■□□□□ 0.52
SEMA3B-203ENST00000419007 CNPY2Q9Y2B0 182 aa18.31■□□□□ 0.52
SEMA3B-203ENST00000419007 HSPA4P34932 840 aa18.3■□□□□ 0.52
SEMA3B-203ENST00000419007 RHPN1Q8TCX5 695 aa18.3■□□□□ 0.52
SEMA3B-203ENST00000419007 PDCL3Q9H2J4 239 aa18.3■□□□□ 0.52
SEMA3B-203ENST00000419007 CEP170BQ9Y4F5 1589 aaPredicted RBP18.3■□□□□ 0.52
SEMA3B-203ENST00000419007 ANXA1P04083 346 aa18.29■□□□□ 0.52
SEMA3B-203ENST00000419007 TTC21AQ8NDW8 1320 aa18.29■□□□□ 0.52
SEMA3B-203ENST00000419007 FIBPO43427 364 aa18.29■□□□□ 0.52
SEMA3B-203ENST00000419007 NBPF7P0C2Y1 421 aaPredicted RBP18.29■□□□□ 0.52
SEMA3B-203ENST00000419007 RBM33Q96EV2 1170 aaKnown RBP18.29■□□□□ 0.52
SEMA3B-203ENST00000419007 ZNF830Q96NB3 372 aaPredicted RBP18.29■□□□□ 0.52
SEMA3B-203ENST00000419007 USP25Q9UHP3 1055 aa18.29■□□□□ 0.52
SEMA3B-203ENST00000419007 CSPP1Q1MSJ5 1256 aa18.28■□□□□ 0.52
SEMA3B-203ENST00000419007 SSH3Q8TE77 659 aa18.28■□□□□ 0.52
SEMA3B-203ENST00000419007 ZMYND15Q9H091 742 aa18.28■□□□□ 0.52
SEMA3B-203ENST00000419007 KDRP35968 1356 aa18.28■□□□□ 0.52
SEMA3B-203ENST00000419007 AK2P54819 239 aa18.28■□□□□ 0.52
SEMA3B-203ENST00000419007 RASEFQ8IZ41 740 aa18.28■□□□□ 0.52
SEMA3B-203ENST00000419007 DDX54Q8TDD1 881 aaKnown RBP18.28■□□□□ 0.52
SEMA3B-203ENST00000419007 SNX14Q9Y5W7 946 aa18.28■□□□□ 0.52
SEMA3B-203ENST00000419007 CNTROBQ8N137 903 aa18.27■□□□□ 0.52
SEMA3B-203ENST00000419007 SSH2Q76I76 1423 aa18.27■□□□□ 0.52
SEMA3B-203ENST00000419007 ADAMTS13Q76LX8 1427 aa18.27■□□□□ 0.52
SEMA3B-203ENST00000419007 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.27■□□□□ 0.52
SEMA3B-203ENST00000419007 HSPA2P54652 639 aa18.27■□□□□ 0.52
SEMA3B-203ENST00000419007 SMC3Q9UQE7 1217 aa18.27■□□□□ 0.52
SEMA3B-203ENST00000419007 SGSM2O43147 1006 aa18.27■□□□□ 0.51
SEMA3B-203ENST00000419007 HOXC9P31274 260 aa18.27■□□□□ 0.51
SEMA3B-203ENST00000419007 ABTB2Q8N961 1025 aa18.27■□□□□ 0.51
SEMA3B-203ENST00000419007 HTATSF1O43719 755 aaKnown RBP18.26■□□□□ 0.51
SEMA3B-203ENST00000419007 CASTP20810 708 aaKnown RBP18.26■□□□□ 0.51
SEMA3B-203ENST00000419007 KIF1BPQ96EK5 621 aa18.26■□□□□ 0.51
SEMA3B-203ENST00000419007 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.26■□□□□ 0.51
SEMA3B-203ENST00000419007 HCLS1P14317 486 aaPredicted RBP18.26■□□□□ 0.51
SEMA3B-203ENST00000419007 PI4K2BQ8TCG2 481 aa18.26■□□□□ 0.51
SEMA3B-203ENST00000419007 MAP3K5Q99683 1374 aa18.26■□□□□ 0.51
SEMA3B-203ENST00000419007 RAD50Q92878 1312 aa18.26■□□□□ 0.51
SEMA3B-203ENST00000419007 PI4KAP2A4QPH2 592 aa18.25■□□□□ 0.51
SEMA3B-203ENST00000419007 RAB11FIP3O75154 756 aa18.25■□□□□ 0.51
SEMA3B-203ENST00000419007 MCM5P33992 734 aa18.25■□□□□ 0.51
SEMA3B-203ENST00000419007 PI4KAP1Q8N8J0 262 aa18.25■□□□□ 0.51
SEMA3B-203ENST00000419007 DIAPH3Q9NSV4 1193 aa18.25■□□□□ 0.51
SEMA3B-203ENST00000419007 TCHHQ07283 1943 aa18.25■□□□□ 0.51
SEMA3B-203ENST00000419007 CHPF2Q9P2E5 772 aa18.25■□□□□ 0.51
SEMA3B-203ENST00000419007 STX6O43752 255 aa18.25■□□□□ 0.51
SEMA3B-203ENST00000419007 ZSCAN22P10073 491 aaPredicted RBP18.25■□□□□ 0.51
SEMA3B-203ENST00000419007 SYT1P21579 422 aa18.25■□□□□ 0.51
SEMA3B-203ENST00000419007 KIAA2012Q0VF49 1180 aa18.25■□□□□ 0.51
SEMA3B-203ENST00000419007 LIMCH1Q9UPQ0 1083 aa18.25■□□□□ 0.51
SEMA3B-203ENST00000419007 RGPD1P0DJD0 1748 aa18.24■□□□□ 0.51
SEMA3B-203ENST00000419007 CCDC83Q8IWF9 413 aa18.24■□□□□ 0.51
SEMA3B-203ENST00000419007 RUFY3Q7L099 469 aa18.24■□□□□ 0.51
SEMA3B-203ENST00000419007 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.24■□□□□ 0.51
SEMA3B-203ENST00000419007 AOX1Q06278 1338 aa18.23■□□□□ 0.51
SEMA3B-203ENST00000419007 CCDC183Q5T5S1 534 aa18.23■□□□□ 0.51
SEMA3B-203ENST00000419007 ANKLE2Q86XL3 938 aa18.23■□□□□ 0.51
SEMA3B-203ENST00000419007 TERF1P54274 439 aa18.23■□□□□ 0.51
SEMA3B-203ENST00000419007 LSG1Q9H089 658 aaKnown RBP18.23■□□□□ 0.51
SEMA3B-203ENST00000419007 RPAP1Q9BWH6 1393 aaPredicted RBP18.22■□□□□ 0.51
SEMA3B-203ENST00000419007 VPS37CA5D8V6 355 aaPredicted RBP18.22■□□□□ 0.51
SEMA3B-203ENST00000419007 KCNJ4P48050 445 aa18.22■□□□□ 0.51
SEMA3B-203ENST00000419007 DNAAF4Q8WXU2 420 aa18.22■□□□□ 0.51
SEMA3B-203ENST00000419007 JAKMIP1Q96N16 626 aaKnown RBP18.22■□□□□ 0.51
SEMA3B-203ENST00000419007 TTC12Q9H892 705 aaPredicted RBP18.22■□□□□ 0.51
SEMA3B-203ENST00000419007 CHMP3Q9Y3E7 222 aa18.22■□□□□ 0.51
SEMA3B-203ENST00000419007 LARGE1O95461 756 aa18.22■□□□□ 0.51
SEMA3B-203ENST00000419007 PRPF40BQ6NWY9 871 aaKnown RBP18.22■□□□□ 0.51
SEMA3B-203ENST00000419007 LGR6Q9HBX8 967 aa18.22■□□□□ 0.51
SEMA3B-203ENST00000419007 KCNQ3O43525 872 aa18.21■□□□□ 0.51
SEMA3B-203ENST00000419007 ADCY5O95622 1261 aa18.21■□□□□ 0.51
SEMA3B-203ENST00000419007 PTPRUQ92729 1446 aa18.21■□□□□ 0.51
SEMA3B-203ENST00000419007 KDM4FA0A1W2PPD8 638 aa18.21■□□□□ 0.51
SEMA3B-203ENST00000419007 GIMAP6Q6P9H5 292 aa18.21■□□□□ 0.51
SEMA3B-203ENST00000419007 C17orf53Q8N3J3 647 aaPredicted RBP18.21■□□□□ 0.51
SEMA3B-203ENST00000419007 POLA2Q14181 598 aa18.2■□□□□ 0.5
SEMA3B-203ENST00000419007 F13A1P00488 732 aa18.2■□□□□ 0.5
SEMA3B-203ENST00000419007 SASS6Q6UVJ0 657 aa18.2■□□□□ 0.5
SEMA3B-203ENST00000419007 CLASRPQ8N2M8 674 aaKnown RBP18.2■□□□□ 0.5
SEMA3B-203ENST00000419007 FAM184AQ8NB25 1140 aa18.2■□□□□ 0.5
SEMA3B-203ENST00000419007 TTC14Q96N46 770 aa18.2■□□□□ 0.5
SEMA3B-203ENST00000419007 GJB2P29033 226 aa18.2■□□□□ 0.5
SEMA3B-203ENST00000419007 UBE2HP62256 183 aa18.2■□□□□ 0.5
SEMA3B-203ENST00000419007 DNM1Q05193 864 aaKnown RBP18.2■□□□□ 0.5
SEMA3B-203ENST00000419007 C9orf78Q9NZ63 289 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms