RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 USP16Q9Y5T5 823 aa21.52■■□□□ 1.04
CALD1-204ENST00000417172 N4BP2Q86UW6 1770 aaPredicted RBP21.51■■□□□ 1.03
CALD1-204ENST00000417172 PIGBQ92521 554 aa21.51■■□□□ 1.03
CALD1-204ENST00000417172 CDCA7Q9BWT1 371 aaPredicted RBP21.51■■□□□ 1.03
CALD1-204ENST00000417172 PTCD1O75127 700 aaKnown RBP21.51■■□□□ 1.03
CALD1-204ENST00000417172 PIP4K2AP48426 406 aaPredicted RBP21.51■■□□□ 1.03
CALD1-204ENST00000417172 CENPQQ7L2Z9 268 aaPredicted RBP21.51■■□□□ 1.03
CALD1-204ENST00000417172 AAMPQ13685 434 aa21.5■■□□□ 1.03
CALD1-204ENST00000417172 MARCH10Q8NA82 808 aaPredicted RBP21.5■■□□□ 1.03
CALD1-204ENST00000417172 SNRPA1P09661 255 aaKnown RBP21.49■■□□□ 1.03
CALD1-204ENST00000417172 PDIA6Q15084 440 aa21.49■■□□□ 1.03
CALD1-204ENST00000417172 DBF4Q9UBU7 674 aaPredicted RBP21.49■■□□□ 1.03
CALD1-204ENST00000417172 ASAP1Q9ULH1 1129 aa21.49■■□□□ 1.03
CALD1-204ENST00000417172 SYTL4Q96C24 671 aaPredicted RBP21.49■■□□□ 1.03
CALD1-204ENST00000417172 AFF2P51816 1311 aa21.48■■□□□ 1.03
CALD1-204ENST00000417172 BCL9O00512 1426 aa21.47■■□□□ 1.03
CALD1-204ENST00000417172 MYL6BP14649 208 aa21.47■■□□□ 1.03
CALD1-204ENST00000417172 PRIM1P49642 420 aaKnown RBP21.46■■□□□ 1.03
CALD1-204ENST00000417172 ACSBG1Q96GR2 724 aa21.46■■□□□ 1.03
CALD1-204ENST00000417172 MEIS3Q99687 375 aa21.46■■□□□ 1.03
CALD1-204ENST00000417172 A0A0G2JS52 829 aa21.45■■□□□ 1.02
CALD1-204ENST00000417172 DDX21Q9NR30 783 aaKnown RBP eCLIP21.45■■□□□ 1.02
CALD1-204ENST00000417172 ATG3Q9NT62 314 aa21.45■■□□□ 1.02
CALD1-204ENST00000417172 ADCY9O60503 1353 aa21.45■■□□□ 1.02
CALD1-204ENST00000417172 THSD7AQ9UPZ6 1657 aa21.45■■□□□ 1.02
CALD1-204ENST00000417172 PI4KAP2A4QPH2 592 aa21.45■■□□□ 1.02
CALD1-204ENST00000417172 PI4KAP1Q8N8J0 262 aa21.45■■□□□ 1.02
CALD1-204ENST00000417172 AIMP1Q12904 312 aaKnown RBP21.44■■□□□ 1.02
CALD1-204ENST00000417172 CHMP4AQ9BY43 222 aa21.44■■□□□ 1.02
CALD1-204ENST00000417172 PXDNLA1KZ92 1463 aa21.43■■□□□ 1.02
CALD1-204ENST00000417172 CCT4P50991 539 aaKnown RBP21.43■■□□□ 1.02
CALD1-204ENST00000417172 HYPKQ9NX55 129 aa21.43■■□□□ 1.02
CALD1-204ENST00000417172 LRP10Q7Z4F1 713 aa21.41■■□□□ 1.02
CALD1-204ENST00000417172 RWDD1Q9H446 243 aaPredicted RBP21.41■■□□□ 1.02
CALD1-204ENST00000417172 SIRT2Q8IXJ6 389 aa21.41■■□□□ 1.02
CALD1-204ENST00000417172 RBM42Q9BTD8 480 aaKnown RBP21.41■■□□□ 1.02
CALD1-204ENST00000417172 DNAAF4Q8WXU2 420 aa21.4■■□□□ 1.02
CALD1-204ENST00000417172 MAP3K2Q9Y2U5 619 aa21.4■■□□□ 1.02
CALD1-204ENST00000417172 NBPF26B4DH59 902 aa21.39■■□□□ 1.02
CALD1-204ENST00000417172 A1BGP04217 495 aa21.39■■□□□ 1.02
CALD1-204ENST00000417172 HDAC1Q13547 482 aaPredicted RBP21.39■■□□□ 1.02
CALD1-204ENST00000417172 NBPF14Q5TI25 921 aa21.39■■□□□ 1.02
CALD1-204ENST00000417172 NBPF10Q6P3W6 841 aaKnown RBP21.39■■□□□ 1.02
CALD1-204ENST00000417172 NBPF15Q8N660 670 aa21.39■■□□□ 1.02
CALD1-204ENST00000417172 XAGE3Q8WTP9 111 aa21.39■■□□□ 1.02
CALD1-204ENST00000417172 GJD4Q96KN9 370 aaPredicted RBP21.39■■□□□ 1.02
CALD1-204ENST00000417172 CHMP4BQ9H444 224 aaKnown RBP21.39■■□□□ 1.02
CALD1-204ENST00000417172 ATP10DQ9P241 1426 aa21.39■■□□□ 1.02
CALD1-204ENST00000417172 ATRNO75882 1429 aa21.39■■□□□ 1.01
CALD1-204ENST00000417172 FAM182BQ5T319 152 aa21.39■■□□□ 1.01
CALD1-204ENST00000417172 SLC4A9Q96Q91 983 aa21.39■■□□□ 1.01
CALD1-204ENST00000417172 KCNQ2O43526 872 aa21.38■■□□□ 1.01
CALD1-204ENST00000417172 COPS6Q7L5N1 327 aa21.38■■□□□ 1.01
CALD1-204ENST00000417172 TJP1Q07157 1748 aa21.38■■□□□ 1.01
CALD1-204ENST00000417172 ARFGEF2Q9Y6D5 1785 aa21.38■■□□□ 1.01
CALD1-204ENST00000417172 BEND3Q5T5X7 828 aa21.37■■□□□ 1.01
CALD1-204ENST00000417172 DNAJC10Q8IXB1 793 aa21.37■■□□□ 1.01
CALD1-204ENST00000417172 KSR2Q6VAB6 950 aa21.37■■□□□ 1.01
CALD1-204ENST00000417172 TSHZ2Q9NRE2 1034 aa21.36■■□□□ 1.01
CALD1-204ENST00000417172 RGS3P49796 1198 aa21.35■■□□□ 1.01
CALD1-204ENST00000417172 SRCIN1Q9C0H9 1055 aa21.35■■□□□ 1.01
CALD1-204ENST00000417172 USP44Q9H0E7 712 aa21.35■■□□□ 1.01
CALD1-204ENST00000417172 TRPC5Q9UL62 973 aaPredicted RBP21.35■■□□□ 1.01
CALD1-204ENST00000417172 CWF19L2Q2TBE0 894 aaKnown RBP21.34■■□□□ 1.01
CALD1-204ENST00000417172 PTF1AQ7RTS3 328 aa21.34■■□□□ 1.01
CALD1-204ENST00000417172 PDZRN3Q9UPQ7 1066 aa21.34■■□□□ 1.01
CALD1-204ENST00000417172 CEP85Q6P2H3 762 aa21.33■■□□□ 1.01
CALD1-204ENST00000417172 AFDNP55196 1824 aaKnown RBP21.33■■□□□ 1.01
CALD1-204ENST00000417172 NUP188Q5SRE5 1749 aa21.33■■□□□ 1.01
CALD1-204ENST00000417172 RIC3Q7Z5B4 369 aa21.33■■□□□ 1
CALD1-204ENST00000417172 QTRT2Q9H974 415 aaKnown RBP21.33■■□□□ 1
CALD1-204ENST00000417172 EP400Q96L91 3159 aa21.32■■□□□ 1
CALD1-204ENST00000417172 DDX58O95786 925 aaKnown RBP21.32■■□□□ 1
CALD1-204ENST00000417172 TTLL7Q6ZT98 887 aa21.31■■□□□ 1
CALD1-204ENST00000417172 VSIG10Q8N0Z9 540 aa21.31■■□□□ 1
CALD1-204ENST00000417172 NBPF7P0C2Y1 421 aaPredicted RBP21.31■■□□□ 1
CALD1-204ENST00000417172 SMC5Q8IY18 1101 aa21.31■■□□□ 1
CALD1-204ENST00000417172 ANKRD44Q8N8A2 993 aa21.31■■□□□ 1
CALD1-204ENST00000417172 LRRFIP2Q9Y608 721 aaKnown RBP21.31■■□□□ 1
CALD1-204ENST00000417172 ERBB4Q15303 1308 aa21.31■■□□□ 1
CALD1-204ENST00000417172 GNAI2P04899 355 aa21.3■■□□□ 1
CALD1-204ENST00000417172 ANKRD13DQ6ZTN6 518 aa21.3■■□□□ 1
CALD1-204ENST00000417172 ZNF330Q9Y3S2 320 aaPredicted RBP21.3■■□□□ 1
CALD1-204ENST00000417172 BTAF1O14981 1849 aa21.3■■□□□ 1
CALD1-204ENST00000417172 BRWD3Q6RI45 1802 aa21.3■■□□□ 1
CALD1-204ENST00000417172 SBF2Q86WG5 1849 aa21.29■■□□□ 1
CALD1-204ENST00000417172 GNAI3P08754 354 aa21.29■■□□□ 1
CALD1-204ENST00000417172 SEPT12Q8IYM1 358 aa21.29■■□□□ 1
CALD1-204ENST00000417172 IGKV5-2P06315 115 aa21.29■■□□□ 1
CALD1-204ENST00000417172 MYD88Q99836 296 aa21.29■■□□□ 1
CALD1-204ENST00000417172 UBTFL1P0CB47 393 aaPredicted RBP21.28■■□□□ 1
CALD1-204ENST00000417172 CYP19A1P11511 503 aaPredicted RBP21.28■■□□□ 1
CALD1-204ENST00000417172 NHSQ6T4R5 1651 aa21.28■■□□□ 1
CALD1-204ENST00000417172 PALLDQ8WX93 1383 aa21.28■■□□□ 1
CALD1-204ENST00000417172 ONECUT3O60422 494 aaPredicted RBP21.27■■□□□ 1
CALD1-204ENST00000417172 LINS1Q8NG48 757 aa21.27■■□□□ 1
CALD1-204ENST00000417172 METTL22Q9BUU2 404 aaPredicted RBP21.27■■□□□ 1
CALD1-204ENST00000417172 TEX13AQ9BXU3 409 aaPredicted RBP21.27■■□□□ 1
CALD1-204ENST00000417172 STARD3NLO95772 234 aa21.26■□□□□ 0.99
CALD1-204ENST00000417172 RPAP2Q8IXW5 612 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms