RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 POLR3DP05423 398 aaPredicted RBP18.46■□□□□ 0.55
PHRF1-203ENST00000416188 KAT6BQ8WYB5 2073 aa18.46■□□□□ 0.55
PHRF1-203ENST00000416188 MAPKBP1O60336 1514 aa18.46■□□□□ 0.55
PHRF1-203ENST00000416188 STK38Q15208 465 aa18.46■□□□□ 0.55
PHRF1-203ENST00000416188 UBE3BQ7Z3V4 1068 aa18.46■□□□□ 0.55
PHRF1-203ENST00000416188 CLEC11AQ9Y240 323 aa18.46■□□□□ 0.55
PHRF1-203ENST00000416188 EXOC6BQ9Y2D4 811 aa18.46■□□□□ 0.55
PHRF1-203ENST00000416188 APBA3O96018 575 aa18.46■□□□□ 0.55
PHRF1-203ENST00000416188 POLKQ9UBT6 870 aa18.46■□□□□ 0.55
PHRF1-203ENST00000416188 SLF2Q8IX21 1173 aa18.46■□□□□ 0.54
PHRF1-203ENST00000416188 TMEM57Q8N5G2 664 aa18.46■□□□□ 0.54
PHRF1-203ENST00000416188 PUS7Q96PZ0 661 aaKnown RBP18.46■□□□□ 0.54
PHRF1-203ENST00000416188 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.45■□□□□ 0.542e-6■■■■□ 19.7
PHRF1-203ENST00000416188 CCDC152Q4G0S7 254 aa18.45■□□□□ 0.54
PHRF1-203ENST00000416188 SSH1Q8WYL5 1049 aa18.45■□□□□ 0.54
PHRF1-203ENST00000416188 NPHP4O75161 1426 aaPredicted RBP18.45■□□□□ 0.54
PHRF1-203ENST00000416188 TRAPPC3LQ5T215 181 aa18.45■□□□□ 0.54
PHRF1-203ENST00000416188 DZIP3Q86Y13 1208 aaKnown RBP18.45■□□□□ 0.54
PHRF1-203ENST00000416188 TSPY26PQ9H489 355 aa18.44■□□□□ 0.54
PHRF1-203ENST00000416188 MAP3K19Q56UN5 1328 aa18.44■□□□□ 0.54
PHRF1-203ENST00000416188 PI4KAP2A4QPH2 592 aa18.44■□□□□ 0.54
PHRF1-203ENST00000416188 C16orf71Q8IYS4 520 aaPredicted RBP18.44■□□□□ 0.54
PHRF1-203ENST00000416188 PI4KAP1Q8N8J0 262 aa18.44■□□□□ 0.54
PHRF1-203ENST00000416188 LETM1O95202 739 aaPredicted RBP18.44■□□□□ 0.54
PHRF1-203ENST00000416188 TPTE2Q6XPS3 522 aa18.44■□□□□ 0.54
PHRF1-203ENST00000416188 SMC2O95347 1197 aa18.44■□□□□ 0.54
PHRF1-203ENST00000416188 ALDH1L2Q3SY69 923 aa18.44■□□□□ 0.54
PHRF1-203ENST00000416188 CT47A1Q5JQC4 288 aaPredicted RBP18.44■□□□□ 0.54
PHRF1-203ENST00000416188 TTLL5Q6EMB2 1281 aa18.44■□□□□ 0.54
PHRF1-203ENST00000416188 NUP133Q8WUM0 1156 aa18.44■□□□□ 0.54
PHRF1-203ENST00000416188 TMEM132AQ24JP5 1023 aa18.43■□□□□ 0.54
PHRF1-203ENST00000416188 EYA1Q99502 592 aa18.43■□□□□ 0.54
PHRF1-203ENST00000416188 MAGI2Q86UL8 1455 aa18.43■□□□□ 0.54
PHRF1-203ENST00000416188 K7ELQ4 463 aaPredicted RBP18.43■□□□□ 0.54
PHRF1-203ENST00000416188 EPS15P42566 896 aa18.43■□□□□ 0.54
PHRF1-203ENST00000416188 XAGE3Q8WTP9 111 aa18.43■□□□□ 0.54
PHRF1-203ENST00000416188 KIF1BPQ96EK5 621 aa18.43■□□□□ 0.54
PHRF1-203ENST00000416188 UBAC1Q9BSL1 405 aa18.43■□□□□ 0.54
PHRF1-203ENST00000416188 ZNF287Q9HBT7 754 aa18.43■□□□□ 0.54
PHRF1-203ENST00000416188 NUTM1Q86Y26 1132 aa18.43■□□□□ 0.54
PHRF1-203ENST00000416188 ZNF396Q96N95 335 aaPredicted RBP18.43■□□□□ 0.54
PHRF1-203ENST00000416188 CCDC69A6NI79 296 aa18.42■□□□□ 0.54
PHRF1-203ENST00000416188 MBIPQ9NS73 344 aa18.42■□□□□ 0.54
PHRF1-203ENST00000416188 ARGLU1Q9NWB6 273 aaPredicted RBP18.42■□□□□ 0.54
PHRF1-203ENST00000416188 CTNNA3Q9UI47 895 aa18.42■□□□□ 0.54
PHRF1-203ENST00000416188 COPS6Q7L5N1 327 aa18.42■□□□□ 0.54
PHRF1-203ENST00000416188 PIP4K2AP48426 406 aaPredicted RBP18.42■□□□□ 0.54
PHRF1-203ENST00000416188 MAP3K12Q12852 859 aa18.42■□□□□ 0.54
PHRF1-203ENST00000416188 TEX35Q5T0J7 233 aa18.42■□□□□ 0.54
PHRF1-203ENST00000416188 JARID2Q92833 1246 aaPredicted RBP18.42■□□□□ 0.54
PHRF1-203ENST00000416188 NYXQ9GZU5 481 aa18.42■□□□□ 0.54
PHRF1-203ENST00000416188 QTRT2Q9H974 415 aaKnown RBP18.42■□□□□ 0.54
PHRF1-203ENST00000416188 MAST1Q9Y2H9 1570 aa18.41■□□□□ 0.54
PHRF1-203ENST00000416188 MYO1BO43795 1136 aa18.41■□□□□ 0.54
PHRF1-203ENST00000416188 ANKRD18AQ8IVF6 992 aa18.41■□□□□ 0.54
PHRF1-203ENST00000416188 MTHFSDQ2M296 383 aaKnown RBP18.41■□□□□ 0.54
PHRF1-203ENST00000416188 SOGA3Q5TF21 947 aa18.41■□□□□ 0.54
PHRF1-203ENST00000416188 ZNF335Q9H4Z2 1342 aaPredicted RBP18.41■□□□□ 0.54
PHRF1-203ENST00000416188 PATL2C9JE40 543 aaKnown RBP18.41■□□□□ 0.54
PHRF1-203ENST00000416188 GRM1Q13255 1194 aa18.41■□□□□ 0.54
PHRF1-203ENST00000416188 WDR78Q5VTH9 848 aa18.4■□□□□ 0.54
PHRF1-203ENST00000416188 LRRFIP2Q9Y608 721 aaKnown RBP18.4■□□□□ 0.54
PHRF1-203ENST00000416188 BRPF1P55201 1214 aaPredicted RBP18.4■□□□□ 0.54
PHRF1-203ENST00000416188 SETQ01105 290 aaPredicted RBP18.4■□□□□ 0.54
PHRF1-203ENST00000416188 JDP2Q8WYK2 163 aa18.4■□□□□ 0.54
PHRF1-203ENST00000416188 RUFY1Q96T51 708 aa18.4■□□□□ 0.54
PHRF1-203ENST00000416188 MKNK2Q9HBH9 465 aa18.4■□□□□ 0.54
PHRF1-203ENST00000416188 CHPF2Q9P2E5 772 aa18.4■□□□□ 0.54
PHRF1-203ENST00000416188 PIK3R4Q99570 1358 aa18.4■□□□□ 0.54
PHRF1-203ENST00000416188 ZNF772Q68DY9 489 aaPredicted RBP18.4■□□□□ 0.54
PHRF1-203ENST00000416188 CWC27Q6UX04 472 aaKnown RBP18.4■□□□□ 0.54
PHRF1-203ENST00000416188 TRPC5Q9UL62 973 aaPredicted RBP18.4■□□□□ 0.54
PHRF1-203ENST00000416188 ANKRD1Q15327 319 aa18.39■□□□□ 0.54
PHRF1-203ENST00000416188 UTP14AQ9BVJ6 771 aaKnown RBP18.39■□□□□ 0.54
PHRF1-203ENST00000416188 RALGAPBQ86X10 1494 aa18.39■□□□□ 0.54
PHRF1-203ENST00000416188 LARP1BQ659C4 914 aaKnown RBP18.39■□□□□ 0.53
PHRF1-203ENST00000416188 A0A1W2PP64 1363 aa18.39■□□□□ 0.53
PHRF1-203ENST00000416188 WDR33Q9C0J8 1336 aaKnown RBP18.39■□□□□ 0.53
PHRF1-203ENST00000416188 BLOC1S2Q6QNY1 142 aa18.39■□□□□ 0.53
PHRF1-203ENST00000416188 TRIM22Q8IYM9 498 aa18.39■□□□□ 0.53
PHRF1-203ENST00000416188 MINDY4BA8MYZ0 360 aa18.38■□□□□ 0.53
PHRF1-203ENST00000416188 TXLNAP40222 546 aa18.38■□□□□ 0.53
PHRF1-203ENST00000416188 RAB11FIP3O75154 756 aa18.38■□□□□ 0.53
PHRF1-203ENST00000416188 ME1P48163 572 aa18.38■□□□□ 0.53
PHRF1-203ENST00000416188 MPNDQ8N594 471 aa18.38■□□□□ 0.53
PHRF1-203ENST00000416188 SPC24Q8NBT2 197 aa18.38■□□□□ 0.53
PHRF1-203ENST00000416188 LDHCP07864 332 aa18.38■□□□□ 0.53
PHRF1-203ENST00000416188 SAMD9Q5K651 1589 aa18.38■□□□□ 0.53
PHRF1-203ENST00000416188 CFAP43Q8NDM7 1665 aa18.38■□□□□ 0.53
PHRF1-203ENST00000416188 ABCA8O94911 1581 aa18.38■□□□□ 0.53
PHRF1-203ENST00000416188 RXRBP28702 533 aa18.38■□□□□ 0.53
PHRF1-203ENST00000416188 CDK5RAP3Q96JB5 506 aa18.38■□□□□ 0.53
PHRF1-203ENST00000416188 DNMT1P26358 1616 aaKnown RBP18.38■□□□□ 0.53
PHRF1-203ENST00000416188 PRIM1P49642 420 aaKnown RBP18.37■□□□□ 0.53
PHRF1-203ENST00000416188 JMYQ8N9B5 988 aa18.37■□□□□ 0.53
PHRF1-203ENST00000416188 BOLA2Q9H3K6 86 aa18.37■□□□□ 0.53
PHRF1-203ENST00000416188 PTPRCP08575 1304 aa18.37■□□□□ 0.53
PHRF1-203ENST00000416188 OGFOD1Q8N543 542 aa18.37■□□□□ 0.53
PHRF1-203ENST00000416188 ODF2Q5BJF6 829 aa18.37■□□□□ 0.53
PHRF1-203ENST00000416188 KRT85P78386 507 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms