RNA–Protein interactions for RNA: ENST00000415944.3

MECP2-204, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-204ENST00000415944 PDZRN3Q9UPQ7 1066 aa10.83□□□□□ -0.68
MECP2-204ENST00000415944 GNAT3A8MTJ3 354 aa10.82□□□□□ -0.68
MECP2-204ENST00000415944 ZBTB7BO15156 539 aaPredicted RBP10.82□□□□□ -0.68
MECP2-204ENST00000415944 HSP90AB1P08238 724 aaKnown RBP10.82□□□□□ -0.68
MECP2-204ENST00000415944 CCT4P50991 539 aaKnown RBP10.82□□□□□ -0.68
MECP2-204ENST00000415944 NUCB1Q02818 461 aa10.82□□□□□ -0.68
MECP2-204ENST00000415944 C1orf141Q5JVX7 400 aa10.82□□□□□ -0.68
MECP2-204ENST00000415944 BCL2L13Q9BXK5 485 aa10.82□□□□□ -0.68
MECP2-204ENST00000415944 STK31Q9BXU1 1019 aa10.82□□□□□ -0.68
MECP2-204ENST00000415944 PAPPAQ13219 1627 aa10.81□□□□□ -0.68
MECP2-204ENST00000415944 BMP2KLQ5H9B9 411 aa10.81□□□□□ -0.68
MECP2-204ENST00000415944 CCDC30Q5VVM6 783 aa10.81□□□□□ -0.68
MECP2-204ENST00000415944 DCAF5Q96JK2 942 aa10.81□□□□□ -0.68
MECP2-204ENST00000415944 LAS1LQ9Y4W2 734 aaKnown RBP10.81□□□□□ -0.68
MECP2-204ENST00000415944 CEMIPQ8WUJ3 1361 aa10.8□□□□□ -0.68
MECP2-204ENST00000415944 LY75O60449 1722 aa10.8□□□□□ -0.68
MECP2-204ENST00000415944 RNMTO43148 476 aaKnown RBP10.79□□□□□ -0.68
MECP2-204ENST00000415944 CHD1LQ86WJ1 897 aa10.79□□□□□ -0.68
MECP2-204ENST00000415944 UBR2Q8IWV8 1755 aa10.78□□□□□ -0.68
MECP2-204ENST00000415944 ERVV-2B6SEH9 535 aa10.78□□□□□ -0.68
MECP2-204ENST00000415944 GNAI3P08754 354 aa10.78□□□□□ -0.68
MECP2-204ENST00000415944 TAF7Q15545 349 aaPredicted RBP10.78□□□□□ -0.68
MECP2-204ENST00000415944 MPRIPQ6WCQ1 1025 aa10.78□□□□□ -0.68
MECP2-204ENST00000415944 NPM2Q86SE8 214 aaKnown RBP10.78□□□□□ -0.68
MECP2-204ENST00000415944 TBC1D32Q96NH3 1257 aa10.78□□□□□ -0.68
MECP2-204ENST00000415944 BCL11BQ9C0K0 894 aaPredicted RBP10.78□□□□□ -0.68
MECP2-204ENST00000415944 TSPYL4Q9UJ04 414 aa10.78□□□□□ -0.68
MECP2-204ENST00000415944 PXDNLA1KZ92 1463 aa10.78□□□□□ -0.68
MECP2-204ENST00000415944 IBTKQ9P2D0 1353 aaPredicted RBP10.77□□□□□ -0.68
MECP2-204ENST00000415944 KDM3BQ7LBC6 1761 aa10.77□□□□□ -0.68
MECP2-204ENST00000415944 ZNF831Q5JPB2 1677 aa10.77□□□□□ -0.69
MECP2-204ENST00000415944 RREB1Q92766 1687 aa10.77□□□□□ -0.69
MECP2-204ENST00000415944 KCNQ2O43526 872 aa10.77□□□□□ -0.69
MECP2-204ENST00000415944 TRIM37O94972 964 aa10.77□□□□□ -0.69
MECP2-204ENST00000415944 PRIM1P49642 420 aaKnown RBP10.77□□□□□ -0.69
MECP2-204ENST00000415944 PTF1AQ7RTS3 328 aa10.77□□□□□ -0.69
MECP2-204ENST00000415944 C8orf58Q8NAV2 365 aa10.77□□□□□ -0.69
MECP2-204ENST00000415944 IL17REQ8NFR9 667 aa10.77□□□□□ -0.69
MECP2-204ENST00000415944 ACSBG1Q96GR2 724 aa10.77□□□□□ -0.69
MECP2-204ENST00000415944 LGR6Q9HBX8 967 aa10.77□□□□□ -0.69
MECP2-204ENST00000415944 CICQ96RK0 1608 aaPredicted RBP10.76□□□□□ -0.69
MECP2-204ENST00000415944 CASC1Q6TDU7 716 aa10.76□□□□□ -0.69
MECP2-204ENST00000415944 CCDC125Q86Z20 511 aa10.76□□□□□ -0.69
MECP2-204ENST00000415944 ANKRD44Q8N8A2 993 aa10.76□□□□□ -0.69
MECP2-204ENST00000415944 UPF1Q92900 1129 aaKnown RBP eCLIP10.76□□□□□ -0.697e-7■□□□□ 11
MECP2-204ENST00000415944 DCTPP1Q9H773 170 aa10.76□□□□□ -0.69
MECP2-204ENST00000415944 SLC52A2Q9HAB3 445 aa10.76□□□□□ -0.69
MECP2-204ENST00000415944 EPB41L2O43491 1005 aaKnown RBP10.75□□□□□ -0.69
MECP2-204ENST00000415944 MCM10Q7L590 875 aa10.75□□□□□ -0.69
MECP2-204ENST00000415944 TSPYL6Q8N831 410 aa10.75□□□□□ -0.69
MECP2-204ENST00000415944 PIGBQ92521 554 aa10.75□□□□□ -0.69
MECP2-204ENST00000415944 TMOD3Q9NYL9 352 aa10.75□□□□□ -0.69
MECP2-204ENST00000415944 TAF1LQ8IZX4 1826 aa10.74□□□□□ -0.69
MECP2-204ENST00000415944 CABP4P57796 275 aa10.74□□□□□ -0.69
MECP2-204ENST00000415944 DCTN1Q14203 1278 aa10.74□□□□□ -0.69
MECP2-204ENST00000415944 SYTL4Q96C24 671 aaPredicted RBP10.74□□□□□ -0.69
MECP2-204ENST00000415944 NUP188Q5SRE5 1749 aa10.74□□□□□ -0.69
MECP2-204ENST00000415944 KCPQ6ZWJ8 1503 aa10.74□□□□□ -0.69
MECP2-204ENST00000415944 PLSCR1O15162 318 aa10.73□□□□□ -0.69
MECP2-204ENST00000415944 PTMSP20962 102 aa10.73□□□□□ -0.69
MECP2-204ENST00000415944 TEFQ10587 303 aa10.73□□□□□ -0.69
MECP2-204ENST00000415944 NFATC2IPQ8NCF5 419 aa10.73□□□□□ -0.69
MECP2-204ENST00000415944 THUMPD2Q9BTF0 503 aaKnown RBP10.73□□□□□ -0.69
MECP2-204ENST00000415944 SRCIN1Q9C0H9 1055 aa10.73□□□□□ -0.69
MECP2-204ENST00000415944 TJP1Q07157 1748 aa10.72□□□□□ -0.69
MECP2-204ENST00000415944 SLC4A2P04920 1241 aa10.72□□□□□ -0.69
MECP2-204ENST00000415944 BAG6P46379 1132 aa10.72□□□□□ -0.69
MECP2-204ENST00000415944 RBM25P49756 843 aaKnown RBP10.72□□□□□ -0.69
MECP2-204ENST00000415944 SF3B2Q13435 895 aaKnown RBP10.72□□□□□ -0.69
MECP2-204ENST00000415944 HSP90AB4PQ58FF6 505 aa10.72□□□□□ -0.69
MECP2-204ENST00000415944 SNX21Q969T3 373 aa10.72□□□□□ -0.69
MECP2-204ENST00000415944 PALLDQ8WX93 1383 aa10.72□□□□□ -0.69
MECP2-204ENST00000415944 COL5A3P25940 1745 aaPredicted RBP10.72□□□□□ -0.69
MECP2-204ENST00000415944 SOCS7O14512 581 aa10.71□□□□□ -0.69
MECP2-204ENST00000415944 APBA3O96018 575 aa10.71□□□□□ -0.69
MECP2-204ENST00000415944 C5P01031 1676 aa10.71□□□□□ -0.69
MECP2-204ENST00000415944 GNAI2P04899 355 aa10.71□□□□□ -0.69
MECP2-204ENST00000415944 ANKRD45Q5TZF3 282 aa10.71□□□□□ -0.69
MECP2-204ENST00000415944 SMARCC1Q92922 1105 aaPredicted RBP10.71□□□□□ -0.69
MECP2-204ENST00000415944 C22orf23Q9BZE7 217 aa10.71□□□□□ -0.69
MECP2-204ENST00000415944 ATG3Q9NT62 314 aa10.71□□□□□ -0.69
MECP2-204ENST00000415944 ASAP1Q9ULH1 1129 aa10.71□□□□□ -0.69
MECP2-204ENST00000415944 TNNQ9UQP3 1299 aa10.71□□□□□ -0.69
MECP2-204ENST00000415944 LAMB4A4D0S4 1761 aa10.7□□□□□ -0.7
MECP2-204ENST00000415944 AOX1Q06278 1338 aa10.7□□□□□ -0.7
MECP2-204ENST00000415944 CDC45O75419 566 aa10.7□□□□□ -0.7
MECP2-204ENST00000415944 CAMKK2Q96RR4 588 aa10.7□□□□□ -0.7
MECP2-204ENST00000415944 OSBPL3Q9H4L5 887 aa10.7□□□□□ -0.7
MECP2-204ENST00000415944 CIZ1Q9ULV3 898 aaPredicted RBP10.7□□□□□ -0.7
MECP2-204ENST00000415944 RAB11FIP3O75154 756 aa10.69□□□□□ -0.7
MECP2-204ENST00000415944 FLIIQ13045 1269 aa10.69□□□□□ -0.7
MECP2-204ENST00000415944 SLC39A6Q13433 755 aa10.69□□□□□ -0.7
MECP2-204ENST00000415944 ZNF790Q6PG37 636 aa10.69□□□□□ -0.7
MECP2-204ENST00000415944 DEFB132Q7Z7B7 95 aa10.69□□□□□ -0.7
MECP2-204ENST00000415944 MYH14Q7Z406 1995 aaKnown RBP10.68□□□□□ -0.7
MECP2-204ENST00000415944 TUBGCP6Q96RT7 1819 aa10.68□□□□□ -0.7
MECP2-204ENST00000415944 QSER1Q2KHR3 1735 aa10.68□□□□□ -0.7
MECP2-204ENST00000415944 BTBD11A6QL63 1104 aa10.68□□□□□ -0.7
MECP2-204ENST00000415944 ELL2O00472 640 aaPredicted RBP10.68□□□□□ -0.7
MECP2-204ENST00000415944 REC8O95072 547 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms