RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 ZNF454Q8N9F8 522 aa8.51□□□□□ -1.05
HDAC8-211ENST00000415409 OXER1Q8TDS5 423 aa8.51□□□□□ -1.05
HDAC8-211ENST00000415409 FRAT1Q92837 279 aaPredicted RBP8.51□□□□□ -1.05
HDAC8-211ENST00000415409 SMC4Q9NTJ3 1288 aa8.51□□□□□ -1.05
HDAC8-211ENST00000415409 PEAK1Q9H792 1746 aa8.51□□□□□ -1.05
HDAC8-211ENST00000415409 PXDNQ92626 1479 aa8.51□□□□□ -1.05
HDAC8-211ENST00000415409 TK2O00142 265 aa8.5□□□□□ -1.05
HDAC8-211ENST00000415409 CHL1O00533 1208 aa8.5□□□□□ -1.05
HDAC8-211ENST00000415409 IPO8O15397 1037 aaKnown RBP8.5□□□□□ -1.05
HDAC8-211ENST00000415409 CSB-PGBD3P0DP91 1061 aa8.5□□□□□ -1.05
HDAC8-211ENST00000415409 DCTN1Q14203 1278 aa8.5□□□□□ -1.05
HDAC8-211ENST00000415409 AMOTQ4VCS5 1084 aa8.5□□□□□ -1.05
HDAC8-211ENST00000415409 C20orf194Q5TEA3 1177 aa8.5□□□□□ -1.05
HDAC8-211ENST00000415409 ZKSCAN2Q63HK3 967 aa8.5□□□□□ -1.05
HDAC8-211ENST00000415409 MCM10Q7L590 875 aa8.5□□□□□ -1.05
HDAC8-211ENST00000415409 CABLES1Q8TDN4 633 aa8.5□□□□□ -1.05
HDAC8-211ENST00000415409 LRRC59Q96AG4 307 aaKnown RBP8.5□□□□□ -1.05
HDAC8-211ENST00000415409 MBIPQ9NS73 344 aa8.5□□□□□ -1.05
HDAC8-211ENST00000415409 HCSTQ9UBK5 93 aa8.5□□□□□ -1.05
HDAC8-211ENST00000415409 RGPD8O14715 1765 aaPredicted RBP8.5□□□□□ -1.05
HDAC8-211ENST00000415409 AAMPQ13685 434 aa8.49□□□□□ -1.05
HDAC8-211ENST00000415409 SSH1Q8WYL5 1049 aa8.49□□□□□ -1.05
HDAC8-211ENST00000415409 BCL2L13Q9BXK5 485 aa8.49□□□□□ -1.05
HDAC8-211ENST00000415409 NLRP2Q9NX02 1062 aa8.49□□□□□ -1.05
HDAC8-211ENST00000415409 KIF16BQ96L93 1317 aa8.49□□□□□ -1.05
HDAC8-211ENST00000415409 CPDO75976 1380 aa8.48□□□□□ -1.05
HDAC8-211ENST00000415409 MAP3K5Q99683 1374 aa8.48□□□□□ -1.05
HDAC8-211ENST00000415409 MAP2P11137 1827 aaKnown RBP8.48□□□□□ -1.05
HDAC8-211ENST00000415409 TWISTNBQ3B726 338 aaPredicted RBP8.48□□□□□ -1.05
HDAC8-211ENST00000415409 C1orf141Q5JVX7 400 aa8.48□□□□□ -1.05
HDAC8-211ENST00000415409 FTSJ3Q8IY81 847 aaKnown RBP8.48□□□□□ -1.05
HDAC8-211ENST00000415409 RAPGEF4Q8WZA2 1011 aa8.48□□□□□ -1.05
HDAC8-211ENST00000415409 LARP6Q9BRS8 491 aaKnown RBP8.48□□□□□ -1.05
HDAC8-211ENST00000415409 PRDM11Q9NQV5 511 aa8.48□□□□□ -1.05
HDAC8-211ENST00000415409 BABAM1Q9NWV8 329 aa8.48□□□□□ -1.05
HDAC8-211ENST00000415409 TSPYL4Q9UJ04 414 aa8.48□□□□□ -1.05
HDAC8-211ENST00000415409 GTPBP6O43824 516 aaPredicted RBP8.47□□□□□ -1.05
HDAC8-211ENST00000415409 VAMP4O75379 141 aa8.47□□□□□ -1.05
HDAC8-211ENST00000415409 TATP17735 454 aaPredicted RBP8.47□□□□□ -1.05
HDAC8-211ENST00000415409 BRPF1P55201 1214 aaPredicted RBP8.47□□□□□ -1.05
HDAC8-211ENST00000415409 CHRNA2Q15822 529 aa8.47□□□□□ -1.05
HDAC8-211ENST00000415409 AKAP4Q5JQC9 854 aa8.47□□□□□ -1.05
HDAC8-211ENST00000415409 ZNF530Q6P9A1 599 aaPredicted RBP8.47□□□□□ -1.05
HDAC8-211ENST00000415409 DDX27Q96GQ7 796 aaKnown RBP8.47□□□□□ -1.05
HDAC8-211ENST00000415409 KIAA0232Q92628 1395 aa8.47□□□□□ -1.05
HDAC8-211ENST00000415409 CRB1P82279 1406 aa8.46□□□□□ -1.05
HDAC8-211ENST00000415409 TRPM3Q9HCF6 1732 aaPredicted RBP8.46□□□□□ -1.05
HDAC8-211ENST00000415409 ELL2O00472 640 aaPredicted RBP8.46□□□□□ -1.06
HDAC8-211ENST00000415409 TAF7Q15545 349 aaPredicted RBP8.46□□□□□ -1.06
HDAC8-211ENST00000415409 ATF7IPQ6VMQ6 1270 aa8.46□□□□□ -1.06
HDAC8-211ENST00000415409 DZIP1LQ8IYY4 767 aaKnown RBP8.46□□□□□ -1.06
HDAC8-211ENST00000415409 C8orf58Q8NAV2 365 aa8.46□□□□□ -1.06
HDAC8-211ENST00000415409 PANK1Q8TE04 598 aa8.46□□□□□ -1.06
HDAC8-211ENST00000415409 KCTD12Q96CX2 325 aaKnown RBP8.46□□□□□ -1.06
HDAC8-211ENST00000415409 PLA2G2EQ9NZK7 142 aa8.46□□□□□ -1.06
HDAC8-211ENST00000415409 NOB1Q9ULX3 412 aaKnown RBP8.46□□□□□ -1.06
HDAC8-211ENST00000415409 SPG7Q9UQ90 795 aa8.46□□□□□ -1.06
HDAC8-211ENST00000415409 RGPD1P0DJD0 1748 aa8.46□□□□□ -1.06
HDAC8-211ENST00000415409 COL16A1Q07092 1604 aaPredicted RBP8.45□□□□□ -1.06
HDAC8-211ENST00000415409 HRO43593 1189 aa8.45□□□□□ -1.06
HDAC8-211ENST00000415409 MRPL50Q8N5N7 158 aaKnown RBP8.45□□□□□ -1.06
HDAC8-211ENST00000415409 TSPYL6Q8N831 410 aa8.45□□□□□ -1.06
HDAC8-211ENST00000415409 IL17REQ8NFR9 667 aa8.45□□□□□ -1.06
HDAC8-211ENST00000415409 ARHGAP45Q92619 1136 aa8.45□□□□□ -1.06
HDAC8-211ENST00000415409 CHMP4AQ9BY43 222 aa8.45□□□□□ -1.06
HDAC8-211ENST00000415409 RGS17Q9UGC6 210 aaPredicted RBP8.45□□□□□ -1.06
HDAC8-211ENST00000415409 COG6Q9Y2V7 657 aa8.45□□□□□ -1.06
HDAC8-211ENST00000415409 SOS1Q07889 1333 aaPredicted RBP8.45□□□□□ -1.06
HDAC8-211ENST00000415409 PLEKHG2Q9H7P9 1386 aa8.45□□□□□ -1.06
HDAC8-211ENST00000415409 NCAPD2Q15021 1401 aa8.45□□□□□ -1.06
HDAC8-211ENST00000415409 ABCC6O95255 1503 aa8.44□□□□□ -1.06
HDAC8-211ENST00000415409 AHDC1Q5TGY3 1603 aaPredicted RBP8.44□□□□□ -1.06
HDAC8-211ENST00000415409 TRIM27P14373 513 aa8.44□□□□□ -1.06
HDAC8-211ENST00000415409 EVA1CP58658 441 aa8.44□□□□□ -1.06
HDAC8-211ENST00000415409 MAP3K9P80192 1104 aa8.44□□□□□ -1.06
HDAC8-211ENST00000415409 TEFQ10587 303 aa8.44□□□□□ -1.06
HDAC8-211ENST00000415409 MVPQ14764 893 aaKnown RBP8.44□□□□□ -1.06
HDAC8-211ENST00000415409 CLUAP1Q96AJ1 413 aa8.44□□□□□ -1.06
HDAC8-211ENST00000415409 API5Q9BZZ5 524 aaKnown RBP8.44□□□□□ -1.06
HDAC8-211ENST00000415409 CHMP4BQ9H444 224 aaKnown RBP8.44□□□□□ -1.06
HDAC8-211ENST00000415409 MIS18AQ9NYP9 233 aa8.44□□□□□ -1.06
HDAC8-211ENST00000415409 JCADQ9P266 1359 aa8.44□□□□□ -1.06
HDAC8-211ENST00000415409 PHRF1Q9P1Y6 1649 aaKnown RBP8.43□□□□□ -1.06
HDAC8-211ENST00000415409 ALS2Q96Q42 1657 aa8.43□□□□□ -1.06
HDAC8-211ENST00000415409 MARF1Q9Y4F3 1742 aaKnown RBP8.43□□□□□ -1.06
HDAC8-211ENST00000415409 RNMTO43148 476 aaKnown RBP8.43□□□□□ -1.06
HDAC8-211ENST00000415409 EVI5O60447 810 aa8.43□□□□□ -1.06
HDAC8-211ENST00000415409 PTPREP23469 700 aa8.43□□□□□ -1.06
HDAC8-211ENST00000415409 TOM1L2Q6ZVM7 507 aa8.43□□□□□ -1.06
HDAC8-211ENST00000415409 CENPQQ7L2Z9 268 aaPredicted RBP8.43□□□□□ -1.06
HDAC8-211ENST00000415409 DDX19BQ9UMR2 479 aa8.43□□□□□ -1.06
HDAC8-211ENST00000415409 WDR17Q8IZU2 1322 aa8.43□□□□□ -1.06
HDAC8-211ENST00000415409 CEMIPQ8WUJ3 1361 aa8.43□□□□□ -1.06
HDAC8-211ENST00000415409 HSP90AB1P08238 724 aaKnown RBP8.42□□□□□ -1.06
HDAC8-211ENST00000415409 RLBP1P12271 317 aa8.42□□□□□ -1.06
HDAC8-211ENST00000415409 MPRIPQ6WCQ1 1025 aa8.42□□□□□ -1.06
HDAC8-211ENST00000415409 ITPRIPQ8IWB1 547 aa8.42□□□□□ -1.06
HDAC8-211ENST00000415409 ARXQ96QS3 562 aa8.42□□□□□ -1.06
HDAC8-211ENST00000415409 STK31Q9BXU1 1019 aa8.42□□□□□ -1.06
HDAC8-211ENST00000415409 BCL2L12Q9HB09 334 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms