RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 ZBTB1Q9Y2K1 713 aa16.58■□□□□ 0.24
LIMS2-210ENST00000413578 COL15A1P39059 1388 aa16.57■□□□□ 0.24
LIMS2-210ENST00000413578 ZPR1O75312 459 aa16.57■□□□□ 0.24
LIMS2-210ENST00000413578 FSTL1Q12841 308 aa16.57■□□□□ 0.24
LIMS2-210ENST00000413578 VSIG10Q8N0Z9 540 aa16.57■□□□□ 0.24
LIMS2-210ENST00000413578 NRXN2Q9P2S2 1712 aa16.56■□□□□ 0.24
LIMS2-210ENST00000413578 KDM2BQ8NHM5 1336 aa16.56■□□□□ 0.24
LIMS2-210ENST00000413578 MTHFSDQ2M296 383 aaKnown RBP16.56■□□□□ 0.24
LIMS2-210ENST00000413578 ZC3H4Q9UPT8 1303 aaKnown RBP16.55■□□□□ 0.24
LIMS2-210ENST00000413578 PER1O15534 1290 aaPredicted RBP16.55■□□□□ 0.24
LIMS2-210ENST00000413578 HMOX1P09601 288 aa16.55■□□□□ 0.24
LIMS2-210ENST00000413578 PRELPP51888 382 aa16.55■□□□□ 0.24
LIMS2-210ENST00000413578 KIF7Q2M1P5 1343 aa16.54■□□□□ 0.24
LIMS2-210ENST00000413578 JMYQ8N9B5 988 aa16.54■□□□□ 0.24
LIMS2-210ENST00000413578 WDR90Q96KV7 1748 aa16.53■□□□□ 0.24
LIMS2-210ENST00000413578 CARMIL3Q8ND23 1372 aa16.53■□□□□ 0.24
LIMS2-210ENST00000413578 SERPINB2P05120 415 aa16.53■□□□□ 0.24
LIMS2-210ENST00000413578 HTRA3P83110 453 aa16.53■□□□□ 0.24
LIMS2-210ENST00000413578 RASSF7Q02833 373 aa16.53■□□□□ 0.24
LIMS2-210ENST00000413578 KLRG1Q96E93 195 aa16.53■□□□□ 0.24
LIMS2-210ENST00000413578 RRAGCQ9HB90 399 aa16.53■□□□□ 0.24
LIMS2-210ENST00000413578 C16orf71Q8IYS4 520 aaPredicted RBP16.52■□□□□ 0.24
LIMS2-210ENST00000413578 COL3A1P02461 1466 aaPredicted RBP16.51■□□□□ 0.23
LIMS2-210ENST00000413578 EIF5P55010 431 aaKnown RBP16.51■□□□□ 0.23
LIMS2-210ENST00000413578 UBR2Q8IWV8 1755 aa16.51■□□□□ 0.23
LIMS2-210ENST00000413578 TNRC6CQ9HCJ0 1690 aaKnown RBP16.5■□□□□ 0.23
LIMS2-210ENST00000413578 NFKBIEO00221 500 aa16.5■□□□□ 0.23
LIMS2-210ENST00000413578 DIAPH1O60610 1272 aaKnown RBP16.5■□□□□ 0.23
LIMS2-210ENST00000413578 LMNB1P20700 586 aa16.5■□□□□ 0.23
LIMS2-210ENST00000413578 TTLL6Q8N841 843 aa16.5■□□□□ 0.23
LIMS2-210ENST00000413578 SBF1O95248 1867 aa16.5■□□□□ 0.23
LIMS2-210ENST00000413578 AFDNP55196 1824 aaKnown RBP16.49■□□□□ 0.23
LIMS2-210ENST00000413578 DLEC1Q9Y238 1755 aa16.49■□□□□ 0.23
LIMS2-210ENST00000413578 GLTPD2A6NH11 291 aa16.49■□□□□ 0.23
LIMS2-210ENST00000413578 SMC1BQ8NDV3 1235 aa16.49■□□□□ 0.23
LIMS2-210ENST00000413578 CANXP27824 592 aaKnown RBP16.48■□□□□ 0.23
LIMS2-210ENST00000413578 IL17REQ8NFR9 667 aa16.48■□□□□ 0.23
LIMS2-210ENST00000413578 ZNF496Q96IT1 587 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-210ENST00000413578 NPC1L1Q9UHC9 1359 aa16.48■□□□□ 0.23
LIMS2-210ENST00000413578 STARD3NLO95772 234 aa16.47■□□□□ 0.23
LIMS2-210ENST00000413578 C2CD5Q86YS7 1000 aa16.47■□□□□ 0.23
LIMS2-210ENST00000413578 HEG1Q9ULI3 1381 aa16.47■□□□□ 0.23
LIMS2-210ENST00000413578 A0A087WZG4 1122 aa16.46■□□□□ 0.23
LIMS2-210ENST00000413578 TBC1D9BQ66K14 1250 aa16.46■□□□□ 0.23
LIMS2-210ENST00000413578 ZNF790Q6PG37 636 aa16.46■□□□□ 0.23
LIMS2-210ENST00000413578 TTC5Q8N0Z6 440 aa16.46■□□□□ 0.23
LIMS2-210ENST00000413578 POTECB2RU33 542 aa16.45■□□□□ 0.22
LIMS2-210ENST00000413578 H0YIN7 160 aa16.45■□□□□ 0.22
LIMS2-210ENST00000413578 VEGFAP15692 232 aaPredicted RBP16.45■□□□□ 0.22
LIMS2-210ENST00000413578 CC2D1BQ5T0F9 858 aaKnown RBP16.45■□□□□ 0.22
LIMS2-210ENST00000413578 CEMIPQ8WUJ3 1361 aa16.45■□□□□ 0.22
LIMS2-210ENST00000413578 SCN7AQ01118 1682 aa16.44■□□□□ 0.22
LIMS2-210ENST00000413578 IL6STP40189 918 aaPredicted RBP16.44■□□□□ 0.22
LIMS2-210ENST00000413578 PRR5LQ6MZQ0 368 aa16.44■□□□□ 0.22
LIMS2-210ENST00000413578 BICDL1Q6ZP65 573 aa16.44■□□□□ 0.22
LIMS2-210ENST00000413578 CCER1Q8TC90 406 aaPredicted RBP16.44■□□□□ 0.22
LIMS2-210ENST00000413578 BRIP1Q9BX63 1249 aa16.44■□□□□ 0.22
LIMS2-210ENST00000413578 PCNTO95613 3336 aa16.43■□□□□ 0.22
LIMS2-210ENST00000413578 GNAT3A8MTJ3 354 aa16.43■□□□□ 0.22
LIMS2-210ENST00000413578 COL13A1Q5TAT6 717 aaPredicted RBP16.43■□□□□ 0.22
LIMS2-210ENST00000413578 GAS2L2Q8NHY3 880 aa16.43■□□□□ 0.22
LIMS2-210ENST00000413578 TEX13AQ9BXU3 409 aaPredicted RBP16.43■□□□□ 0.22
LIMS2-210ENST00000413578 PDZRN3Q9UPQ7 1066 aa16.43■□□□□ 0.22
LIMS2-210ENST00000413578 VIRMAQ69YN4 1812 aaKnown RBP16.42■□□□□ 0.22
LIMS2-210ENST00000413578 CAMTA2O94983 1202 aa16.42■□□□□ 0.22
LIMS2-210ENST00000413578 TEFQ10587 303 aa16.42■□□□□ 0.22
LIMS2-210ENST00000413578 TBC1D2BQ9UPU7 963 aa16.42■□□□□ 0.22
LIMS2-210ENST00000413578 LTBP3Q9NS15 1303 aa16.42■□□□□ 0.22
LIMS2-210ENST00000413578 ANKRD31Q8N7Z5 1873 aa16.42■□□□□ 0.22
LIMS2-210ENST00000413578 PDE6BP35913 854 aa16.41■□□□□ 0.22
LIMS2-210ENST00000413578 TIAM2Q8IVF5 1701 aa16.41■□□□□ 0.22
LIMS2-210ENST00000413578 SIPA1L3O60292 1781 aaPredicted RBP16.41■□□□□ 0.22
LIMS2-210ENST00000413578 COL11A2P13942 1736 aaPredicted RBP16.4■□□□□ 0.22
LIMS2-210ENST00000413578 C21orf2O43822 256 aa16.4■□□□□ 0.22
LIMS2-210ENST00000413578 A1BGP04217 495 aa16.4■□□□□ 0.22
LIMS2-210ENST00000413578 CCDC24Q8N4L8 307 aa16.4■□□□□ 0.22
LIMS2-210ENST00000413578 FMNL2Q96PY5 1086 aa16.4■□□□□ 0.22
LIMS2-210ENST00000413578 U2SURPO15042 1029 aaKnown RBP16.39■□□□□ 0.21
LIMS2-210ENST00000413578 KCNQ3O43525 872 aa16.39■□□□□ 0.21
LIMS2-210ENST00000413578 ZNF622Q969S3 477 aaKnown RBP eCLIP16.39■□□□□ 0.21
LIMS2-210ENST00000413578 PHACTR3Q96KR7 559 aa16.39■□□□□ 0.21
LIMS2-210ENST00000413578 SRGNP10124 158 aa16.38■□□□□ 0.21
LIMS2-210ENST00000413578 DPY19L2Q6NUT2 758 aa16.38■□□□□ 0.21
LIMS2-210ENST00000413578 RSPH6AQ9H0K4 717 aa16.38■□□□□ 0.21
LIMS2-210ENST00000413578 ERFEQ4G0M1 354 aa16.37■□□□□ 0.21
LIMS2-210ENST00000413578 STYK1Q6J9G0 422 aa16.37■□□□□ 0.21
LIMS2-210ENST00000413578 CNBD1Q8NA66 436 aa16.37■□□□□ 0.21
LIMS2-210ENST00000413578 ZNF330Q9Y3S2 320 aaPredicted RBP16.37■□□□□ 0.21
LIMS2-210ENST00000413578 USP16Q9Y5T5 823 aa16.37■□□□□ 0.21
LIMS2-210ENST00000413578 FER1L6Q2WGJ9 1857 aa16.36■□□□□ 0.21
LIMS2-210ENST00000413578 BTBD11A6QL63 1104 aa16.36■□□□□ 0.21
LIMS2-210ENST00000413578 PRKAR2BP31323 418 aa16.36■□□□□ 0.21
LIMS2-210ENST00000413578 DZIP3Q86Y13 1208 aaKnown RBP16.36■□□□□ 0.21
LIMS2-210ENST00000413578 C7orf43Q8WVR3 580 aa16.36■□□□□ 0.21
LIMS2-210ENST00000413578 SETDB2Q96T68 719 aa16.36■□□□□ 0.21
LIMS2-210ENST00000413578 TAOK3Q9H2K8 898 aa16.36■□□□□ 0.21
LIMS2-210ENST00000413578 PRPF40BQ6NWY9 871 aaKnown RBP16.35■□□□□ 0.21
LIMS2-210ENST00000413578 CLEC4GQ6UXB4 293 aa16.35■□□□□ 0.21
LIMS2-210ENST00000413578 CNKSR1Q969H4 720 aa16.35■□□□□ 0.21
LIMS2-210ENST00000413578 ZNF219Q9P2Y4 722 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms