RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 CYP2E1P05181 493 aaPredicted RBP16.78■□□□□ 0.28
NUB1-201ENST00000413040 C1orf141Q5JVX7 400 aa16.78■□□□□ 0.28
NUB1-201ENST00000413040 KIAA1211Q6ZU35 1233 aa16.78■□□□□ 0.28
NUB1-201ENST00000413040 SSH3Q8TE77 659 aa16.78■□□□□ 0.28
NUB1-201ENST00000413040 SALL3Q9BXA9 1300 aa16.77■□□□□ 0.28
NUB1-201ENST00000413040 SPG7Q9UQ90 795 aa16.77■□□□□ 0.28
NUB1-201ENST00000413040 CLCN1P35523 988 aa16.77■□□□□ 0.28
NUB1-201ENST00000413040 RNF214Q8ND24 703 aa16.77■□□□□ 0.28
NUB1-201ENST00000413040 KIF1BPQ96EK5 621 aa16.77■□□□□ 0.28
NUB1-201ENST00000413040 SYCE3A1L190 88 aa16.77■□□□□ 0.27
NUB1-201ENST00000413040 PRIM1P49642 420 aaKnown RBP16.77■□□□□ 0.27
NUB1-201ENST00000413040 CLEC17AQ6ZS10 378 aa16.77■□□□□ 0.27
NUB1-201ENST00000413040 UBE2Q2Q8WVN8 375 aa16.77■□□□□ 0.27
NUB1-201ENST00000413040 GPT2Q8TD30 523 aa16.76■□□□□ 0.27
NUB1-201ENST00000413040 DDX54Q8TDD1 881 aaKnown RBP16.76■□□□□ 0.27
NUB1-201ENST00000413040 NSFL1CQ9UNZ2 370 aaKnown RBP16.76■□□□□ 0.27
NUB1-201ENST00000413040 PA2G4Q9UQ80 394 aaKnown RBP16.76■□□□□ 0.27
NUB1-201ENST00000413040 RGPD1P0DJD0 1748 aa16.76■□□□□ 0.27
NUB1-201ENST00000413040 TOPAZ1Q8N9V7 1692 aa16.76■□□□□ 0.27
NUB1-201ENST00000413040 MCM2P49736 904 aa16.76■□□□□ 0.27
NUB1-201ENST00000413040 PLEKHO1Q53GL0 409 aaPredicted RBP16.76■□□□□ 0.27
NUB1-201ENST00000413040 PRAMEF22A3QJZ6 481 aa16.75■□□□□ 0.27
NUB1-201ENST00000413040 ORAI2Q96SN7 254 aa16.75■□□□□ 0.27
NUB1-201ENST00000413040 CWF19L2Q2TBE0 894 aaKnown RBP16.75■□□□□ 0.27
NUB1-201ENST00000413040 ANKLE2Q86XL3 938 aa16.75■□□□□ 0.27
NUB1-201ENST00000413040 STAP2Q9UGK3 403 aa16.75■□□□□ 0.27
NUB1-201ENST00000413040 CNTROBQ8N137 903 aa16.75■□□□□ 0.27
NUB1-201ENST00000413040 MAP3K2Q9Y2U5 619 aa16.75■□□□□ 0.27
NUB1-201ENST00000413040 RAB11FIP3O75154 756 aa16.74■□□□□ 0.27
NUB1-201ENST00000413040 CPA1P15085 419 aa16.74■□□□□ 0.27
NUB1-201ENST00000413040 RBSNQ9H1K0 784 aa16.74■□□□□ 0.27
NUB1-201ENST00000413040 CCDC173Q0VFZ6 552 aa16.74■□□□□ 0.27
NUB1-201ENST00000413040 BEND3Q5T5X7 828 aa16.74■□□□□ 0.27
NUB1-201ENST00000413040 CLASRPQ8N2M8 674 aaKnown RBP16.74■□□□□ 0.27
NUB1-201ENST00000413040 DIAPH3Q9NSV4 1193 aa16.74■□□□□ 0.27
NUB1-201ENST00000413040 NALCNQ8IZF0 1738 aa16.74■□□□□ 0.27
NUB1-201ENST00000413040 PIK3C2AO00443 1686 aa16.74■□□□□ 0.27
NUB1-201ENST00000413040 PROSER3Q2NL68 480 aa16.73■□□□□ 0.27
NUB1-201ENST00000413040 TMEM63CQ9P1W3 806 aa16.73■□□□□ 0.27
NUB1-201ENST00000413040 ZC3H6P61129 1189 aaKnown RBP16.73■□□□□ 0.27
NUB1-201ENST00000413040 GCP02774 474 aa16.72■□□□□ 0.27
NUB1-201ENST00000413040 KCNJ4P48050 445 aa16.72■□□□□ 0.27
NUB1-201ENST00000413040 IFIT2P09913 472 aaKnown RBP16.72■□□□□ 0.27
NUB1-201ENST00000413040 ANAPC15P60006 121 aa16.72■□□□□ 0.27
NUB1-201ENST00000413040 KCNH5Q8NCM2 988 aa16.72■□□□□ 0.27
NUB1-201ENST00000413040 SIL1Q9H173 461 aa16.72■□□□□ 0.27
NUB1-201ENST00000413040 BABAM1Q9NWV8 329 aa16.72■□□□□ 0.27
NUB1-201ENST00000413040 DBF4Q9UBU7 674 aaPredicted RBP16.72■□□□□ 0.27
NUB1-201ENST00000413040 FMN2Q9NZ56 1722 aa16.72■□□□□ 0.27
NUB1-201ENST00000413040 MSNP26038 577 aaKnown RBP16.71■□□□□ 0.27
NUB1-201ENST00000413040 AKAP4Q5JQC9 854 aa16.71■□□□□ 0.27
NUB1-201ENST00000413040 PI4K2BQ8TCG2 481 aa16.71■□□□□ 0.27
NUB1-201ENST00000413040 ZNF445P59923 1031 aa16.71■□□□□ 0.26
NUB1-201ENST00000413040 SLC39A6Q13433 755 aa16.7■□□□□ 0.26
NUB1-201ENST00000413040 HSP90AB4PQ58FF6 505 aa16.7■□□□□ 0.26
NUB1-201ENST00000413040 RASEFQ8IZ41 740 aa16.7■□□□□ 0.26
NUB1-201ENST00000413040 ANKRD24Q8TF21 1146 aa16.7■□□□□ 0.26
NUB1-201ENST00000413040 SGSM2O43147 1006 aa16.7■□□□□ 0.26
NUB1-201ENST00000413040 BRD1O95696 1058 aa16.7■□□□□ 0.26
NUB1-201ENST00000413040 MYL6BP14649 208 aa16.7■□□□□ 0.26
NUB1-201ENST00000413040 POLA2Q14181 598 aa16.7■□□□□ 0.26
NUB1-201ENST00000413040 RNMTO43148 476 aaKnown RBP16.69■□□□□ 0.26
NUB1-201ENST00000413040 HSPA4P34932 840 aa16.69■□□□□ 0.26
NUB1-201ENST00000413040 ANKARQ7Z5J8 1434 aa16.69■□□□□ 0.26
NUB1-201ENST00000413040 ARHGAP23Q9P227 1491 aa16.69■□□□□ 0.26
NUB1-201ENST00000413040 CUL4AQ13619 759 aa16.69■□□□□ 0.26
NUB1-201ENST00000413040 AACSQ86V21 672 aa16.69■□□□□ 0.26
NUB1-201ENST00000413040 CCDC8Q9H0W5 538 aaPredicted RBP16.69■□□□□ 0.26
NUB1-201ENST00000413040 CASTP20810 708 aaKnown RBP16.69■□□□□ 0.26
NUB1-201ENST00000413040 JARID2Q92833 1246 aaPredicted RBP16.69■□□□□ 0.26
NUB1-201ENST00000413040 CHMP4AQ9BY43 222 aa16.69■□□□□ 0.26
NUB1-201ENST00000413040 SNX14Q9Y5W7 946 aa16.69■□□□□ 0.26
NUB1-201ENST00000413040 SLIT1O75093 1534 aa16.68■□□□□ 0.26
NUB1-201ENST00000413040 GLRX3O76003 335 aaKnown RBP16.68■□□□□ 0.26
NUB1-201ENST00000413040 PIP4K2AP48426 406 aaPredicted RBP16.68■□□□□ 0.26
NUB1-201ENST00000413040 AK2P54819 239 aa16.67■□□□□ 0.26
NUB1-201ENST00000413040 PRPF40BQ6NWY9 871 aaKnown RBP16.67■□□□□ 0.26
NUB1-201ENST00000413040 RIC3Q7Z5B4 369 aa16.67■□□□□ 0.26
NUB1-201ENST00000413040 NLRP2Q9NX02 1062 aa16.67■□□□□ 0.26
NUB1-201ENST00000413040 GADD45BO75293 160 aaPredicted RBP16.67■□□□□ 0.26
NUB1-201ENST00000413040 MBD3O95983 291 aa16.67■□□□□ 0.26
NUB1-201ENST00000413040 MPNDQ8N594 471 aa16.67■□□□□ 0.26
NUB1-201ENST00000413040 CEMIPQ8WUJ3 1361 aa16.67■□□□□ 0.26
NUB1-201ENST00000413040 GIGYF1O75420 1035 aaPredicted RBP16.67■□□□□ 0.26
NUB1-201ENST00000413040 RAD50Q92878 1312 aa16.66■□□□□ 0.26
NUB1-201ENST00000413040 G3BP1Q13283 466 aaKnown RBP eCLIP16.66■□□□□ 0.26
NUB1-201ENST00000413040 AMOTQ4VCS5 1084 aa16.66■□□□□ 0.26
NUB1-201ENST00000413040 KLHDC4Q8TBB5 520 aa16.66■□□□□ 0.26
NUB1-201ENST00000413040 INTS4Q96HW7 963 aaKnown RBP16.66■□□□□ 0.26
NUB1-201ENST00000413040 GPATCH3Q96I76 525 aa16.66■□□□□ 0.26
NUB1-201ENST00000413040 JAKMIP1Q96N16 626 aaKnown RBP16.66■□□□□ 0.26
NUB1-201ENST00000413040 SMC3Q9UQE7 1217 aa16.66■□□□□ 0.26
NUB1-201ENST00000413040 KSR2Q6VAB6 950 aa16.66■□□□□ 0.26
NUB1-201ENST00000413040 ECHDC1Q9NTX5 307 aa16.66■□□□□ 0.26
NUB1-201ENST00000413040 AXIN2Q9Y2T1 843 aa16.66■□□□□ 0.26
NUB1-201ENST00000413040 CCDC9Q9Y3X0 531 aaKnown RBP16.66■□□□□ 0.26
NUB1-201ENST00000413040 ADCY9O60503 1353 aa16.66■□□□□ 0.26
NUB1-201ENST00000413040 AOX1Q06278 1338 aa16.65■□□□□ 0.26
NUB1-201ENST00000413040 WDR33Q9C0J8 1336 aaKnown RBP16.65■□□□□ 0.26
NUB1-201ENST00000413040 NWD1Q149M9 1564 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms