RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 TMEM51Q9NW97 253 aa9.95□□□□□ -0.82
PBRM1-209ENST00000412587 CEP126Q9P2H0 1117 aa9.95□□□□□ -0.82
PBRM1-209ENST00000412587 ARID4AP29374 1257 aaPredicted RBP9.95□□□□□ -0.82
PBRM1-209ENST00000412587 CEP135Q66GS9 1140 aa9.95□□□□□ -0.82
PBRM1-209ENST00000412587 TMEM57Q8N5G2 664 aa9.95□□□□□ -0.82
PBRM1-209ENST00000412587 NGLY1Q96IV0 654 aa9.95□□□□□ -0.82
PBRM1-209ENST00000412587 NEMFO60524 1076 aa9.95□□□□□ -0.82
PBRM1-209ENST00000412587 STK11IPQ8N1F8 1099 aa9.95□□□□□ -0.82
PBRM1-209ENST00000412587 SSH1Q8WYL5 1049 aa9.95□□□□□ -0.82
PBRM1-209ENST00000412587 MYO6Q9UM54 1294 aa9.95□□□□□ -0.82
PBRM1-209ENST00000412587 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.95□□□□□ -0.82
PBRM1-209ENST00000412587 ZSCAN20P17040 1043 aaPredicted RBP9.95□□□□□ -0.82
PBRM1-209ENST00000412587 MICALL1Q8N3F8 863 aa9.95□□□□□ -0.82
PBRM1-209ENST00000412587 BICD2Q8TD16 824 aa9.95□□□□□ -0.82
PBRM1-209ENST00000412587 TCOF1Q13428 1488 aaKnown RBP9.95□□□□□ -0.82
PBRM1-209ENST00000412587 CASQ1P31415 396 aa9.94□□□□□ -0.82
PBRM1-209ENST00000412587 PSMD1Q99460 953 aa9.94□□□□□ -0.82
PBRM1-209ENST00000412587 GBP3Q9H0R5 595 aa9.94□□□□□ -0.82
PBRM1-209ENST00000412587 TCEAL9Q9UHQ7 104 aa9.94□□□□□ -0.82
PBRM1-209ENST00000412587 RIOK3O14730 519 aaKnown RBP9.94□□□□□ -0.82
PBRM1-209ENST00000412587 SART3Q15020 963 aaKnown RBP9.94□□□□□ -0.82
PBRM1-209ENST00000412587 ICE2Q659A1 982 aa9.94□□□□□ -0.82
PBRM1-209ENST00000412587 NAT10Q9H0A0 1025 aaKnown RBP9.94□□□□□ -0.82
PBRM1-209ENST00000412587 DISP1Q96F81 1524 aa9.94□□□□□ -0.82
PBRM1-209ENST00000412587 PRIM1P49642 420 aaKnown RBP9.94□□□□□ -0.82
PBRM1-209ENST00000412587 NEK4P51957 841 aa9.94□□□□□ -0.82
PBRM1-209ENST00000412587 FMNL3Q8IVF7 1028 aa9.94□□□□□ -0.82
PBRM1-209ENST00000412587 MSH6P52701 1360 aa9.94□□□□□ -0.82
PBRM1-209ENST00000412587 ANKRD36BQ8N2N9 1353 aa9.94□□□□□ -0.82
PBRM1-209ENST00000412587 HMGB2P26583 209 aaKnown RBP9.94□□□□□ -0.82
PBRM1-209ENST00000412587 CCDC183Q5T5S1 534 aa9.94□□□□□ -0.82
PBRM1-209ENST00000412587 LARP1Q6PKG0 1096 aaKnown RBP9.94□□□□□ -0.82
PBRM1-209ENST00000412587 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.94□□□□□ -0.821e-6■■■■■ 30.9
PBRM1-209ENST00000412587 SMC2O95347 1197 aa9.93□□□□□ -0.82
PBRM1-209ENST00000412587 FOSBP53539 338 aa9.93□□□□□ -0.82
PBRM1-209ENST00000412587 RARSP54136 660 aaKnown RBP9.93□□□□□ -0.82
PBRM1-209ENST00000412587 SAMD1Q6SPF0 538 aaPredicted RBP9.93□□□□□ -0.82
PBRM1-209ENST00000412587 CHD1LQ86WJ1 897 aa9.93□□□□□ -0.82
PBRM1-209ENST00000412587 YY1AP1Q9H869 796 aa9.93□□□□□ -0.82
PBRM1-209ENST00000412587 PPP1R1BQ9UD71 204 aaPredicted RBP9.93□□□□□ -0.82
PBRM1-209ENST00000412587 RNF123Q5XPI4 1314 aa9.93□□□□□ -0.82
PBRM1-209ENST00000412587 A0A1B0GUA9 196 aa9.93□□□□□ -0.82
PBRM1-209ENST00000412587 RAB3GAP1Q15042 981 aa9.93□□□□□ -0.82
PBRM1-209ENST00000412587 ALDH1L2Q3SY69 923 aa9.93□□□□□ -0.82
PBRM1-209ENST00000412587 AACSQ86V21 672 aa9.93□□□□□ -0.82
PBRM1-209ENST00000412587 TTC12Q9H892 705 aaPredicted RBP9.93□□□□□ -0.82
PBRM1-209ENST00000412587 GEMIN8Q9NWZ8 242 aaKnown RBP9.93□□□□□ -0.82
PBRM1-209ENST00000412587 CCDC171Q6TFL3 1326 aa9.93□□□□□ -0.82
PBRM1-209ENST00000412587 WDR33Q9C0J8 1336 aaKnown RBP9.93□□□□□ -0.82
PBRM1-209ENST00000412587 GOLGA6L10A6NI86 522 aa9.93□□□□□ -0.82
PBRM1-209ENST00000412587 EXOC5O00471 708 aa9.93□□□□□ -0.82
PBRM1-209ENST00000412587 ZNF853P0CG23 659 aa9.93□□□□□ -0.82
PBRM1-209ENST00000412587 IL1RAPL2Q9NP60 686 aa9.93□□□□□ -0.82
PBRM1-209ENST00000412587 BICDL1Q6ZP65 573 aa9.92□□□□□ -0.82
PBRM1-209ENST00000412587 CEP83Q9Y592 693 aa9.92□□□□□ -0.82
PBRM1-209ENST00000412587 TTC21AQ8NDW8 1320 aa9.92□□□□□ -0.82
PBRM1-209ENST00000412587 TMCO5BA8MYB1 307 aa9.92□□□□□ -0.82
PBRM1-209ENST00000412587 ZNF445P59923 1031 aa9.92□□□□□ -0.82
PBRM1-209ENST00000412587 CHRNA2Q15822 529 aa9.92□□□□□ -0.82
PBRM1-209ENST00000412587 TICAM2Q86XR7 235 aa9.92□□□□□ -0.82
PBRM1-209ENST00000412587 KIF1CO43896 1103 aaKnown RBP9.92□□□□□ -0.82
PBRM1-209ENST00000412587 MICALCLQ6ZW33 695 aa9.92□□□□□ -0.82
PBRM1-209ENST00000412587 RGS22Q8NE09 1264 aa9.92□□□□□ -0.82
PBRM1-209ENST00000412587 CCDC85AQ96PX6 553 aaPredicted RBP9.92□□□□□ -0.82
PBRM1-209ENST00000412587 ZBTB12Q9Y330 459 aaPredicted RBP9.92□□□□□ -0.82
PBRM1-209ENST00000412587 PRAG1Q86YV5 1406 aa9.92□□□□□ -0.82
PBRM1-209ENST00000412587 RALGAPBQ86X10 1494 aa9.92□□□□□ -0.82
PBRM1-209ENST00000412587 SLU7O95391 586 aaKnown RBP9.92□□□□□ -0.82
PBRM1-209ENST00000412587 CAPN2P17655 700 aa9.92□□□□□ -0.82
PBRM1-209ENST00000412587 AP1ARQ63HQ0 302 aa9.92□□□□□ -0.82
PBRM1-209ENST00000412587 CCDC47Q96A33 483 aaKnown RBP9.92□□□□□ -0.82
PBRM1-209ENST00000412587 MTMR7Q9Y216 660 aa9.92□□□□□ -0.82
PBRM1-209ENST00000412587 ERBB4Q15303 1308 aa9.92□□□□□ -0.82
PBRM1-209ENST00000412587 NPHP3Q7Z494 1330 aa9.92□□□□□ -0.82
PBRM1-209ENST00000412587 SLC3A2P08195 630 aaKnown RBP9.91□□□□□ -0.82
PBRM1-209ENST00000412587 CCDC172P0C7W6 258 aa9.91□□□□□ -0.82
PBRM1-209ENST00000412587 IFNL2Q8IZJ0 200 aa9.91□□□□□ -0.82
PBRM1-209ENST00000412587 ANKRD24Q8TF21 1146 aa9.91□□□□□ -0.82
PBRM1-209ENST00000412587 ZMYM3Q14202 1370 aa9.91□□□□□ -0.82
PBRM1-209ENST00000412587 SHANK2Q9UPX8 1470 aa9.91□□□□□ -0.82
PBRM1-209ENST00000412587 LOC102724159A0A0B4J2E5 919 aa9.91□□□□□ -0.82
PBRM1-209ENST00000412587 GOLGA6L7A0A1B0GV03 622 aa9.91□□□□□ -0.82
PBRM1-209ENST00000412587 FBLN1P23142 703 aa9.91□□□□□ -0.82
PBRM1-209ENST00000412587 PWP2Q15269 919 aaKnown RBP9.91□□□□□ -0.82
PBRM1-209ENST00000412587 ZNF652Q9Y2D9 606 aa9.91□□□□□ -0.82
PBRM1-209ENST00000412587 XBP1P17861 261 aa9.91□□□□□ -0.82
PBRM1-209ENST00000412587 RRP12Q5JTH9 1297 aaKnown RBP9.91□□□□□ -0.82
PBRM1-209ENST00000412587 TSC1Q92574 1164 aa9.91□□□□□ -0.82
PBRM1-209ENST00000412587 NCAPGQ9BPX3 1015 aa9.91□□□□□ -0.82
PBRM1-209ENST00000412587 INCENPQ9NQS7 918 aa9.91□□□□□ -0.82
PBRM1-209ENST00000412587 EXOC6BQ9Y2D4 811 aa9.91□□□□□ -0.82
PBRM1-209ENST00000412587 JRKLQ9Y4A0 524 aa9.91□□□□□ -0.82
PBRM1-209ENST00000412587 GBP2P32456 591 aaPredicted RBP9.91□□□□□ -0.82
PBRM1-209ENST00000412587 FKBP4Q02790 459 aaKnown RBP eCLIP9.91□□□□□ -0.82
PBRM1-209ENST00000412587 FMNL2Q96PY5 1086 aa9.91□□□□□ -0.82
PBRM1-209ENST00000412587 DBF4Q9UBU7 674 aaPredicted RBP9.91□□□□□ -0.82
PBRM1-209ENST00000412587 HSP90AB2PQ58FF8 381 aa9.9□□□□□ -0.82
PBRM1-209ENST00000412587 SMC5Q8IY18 1101 aa9.9□□□□□ -0.82
PBRM1-209ENST00000412587 SNX21Q969T3 373 aa9.9□□□□□ -0.82
PBRM1-209ENST00000412587 NACAP1Q9BZK3 213 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms