RNA–Protein interactions for RNA: ENST00000412011.5

ITSN2-205, Transcript of intersectin 2, humanhuman

TSL 1 (best)

Gene ITSN2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-205ENST00000412011 PDIA6Q15084 440 aa25.64■■□□□ 1.7
ITSN2-205ENST00000412011 C16orf71Q8IYS4 520 aaPredicted RBP25.64■■□□□ 1.7
ITSN2-205ENST00000412011 PNMA6EA0A0J9YXQ4 647 aa25.64■■□□□ 1.69
ITSN2-205ENST00000412011 SMARCA5O60264 1052 aaPredicted RBP25.64■■□□□ 1.69
ITSN2-205ENST00000412011 APBB1O00213 710 aa25.63■■□□□ 1.69
ITSN2-205ENST00000412011 TTC5Q8N0Z6 440 aa25.63■■□□□ 1.69
ITSN2-205ENST00000412011 COL22A1Q8NFW1 1626 aaPredicted RBP25.62■■□□□ 1.69
ITSN2-205ENST00000412011 KSR2Q6VAB6 950 aa25.62■■□□□ 1.69
ITSN2-205ENST00000412011 MAP3K2Q9Y2U5 619 aa25.62■■□□□ 1.69
ITSN2-205ENST00000412011 COL14A1Q05707 1796 aaKnown RBP25.62■■□□□ 1.69
ITSN2-205ENST00000412011 GLI3P10071 1580 aa25.62■■□□□ 1.69
ITSN2-205ENST00000412011 LAMB4A4D0S4 1761 aa25.6■■□□□ 1.69
ITSN2-205ENST00000412011 SNRPA1P09661 255 aaKnown RBP25.6■■□□□ 1.69
ITSN2-205ENST00000412011 MFAP1P55081 439 aaKnown RBP25.6■■□□□ 1.69
ITSN2-205ENST00000412011 NKX1-1Q15270 411 aaPredicted RBP25.6■■□□□ 1.69
ITSN2-205ENST00000412011 OTUD7AQ8TE49 926 aaPredicted RBP25.6■■□□□ 1.69
ITSN2-205ENST00000412011 FMNL2Q96PY5 1086 aa25.6■■□□□ 1.69
ITSN2-205ENST00000412011 BCL11AQ9H165 835 aa25.59■■□□□ 1.69
ITSN2-205ENST00000412011 EXOC6BQ9Y2D4 811 aa25.59■■□□□ 1.69
ITSN2-205ENST00000412011 NBPF7P0C2Y1 421 aaPredicted RBP25.59■■□□□ 1.69
ITSN2-205ENST00000412011 GSPT1P15170 499 aaKnown RBP25.59■■□□□ 1.69
ITSN2-205ENST00000412011 UBR2Q8IWV8 1755 aa25.58■■□□□ 1.69
ITSN2-205ENST00000412011 COL16A1Q07092 1604 aaPredicted RBP25.58■■□□□ 1.69
ITSN2-205ENST00000412011 ALDH1L1O75891 902 aa25.58■■□□□ 1.69
ITSN2-205ENST00000412011 BTG4Q9NY30 223 aa25.58■■□□□ 1.69
ITSN2-205ENST00000412011 ERVV-2B6SEH9 535 aa25.57■■□□□ 1.68
ITSN2-205ENST00000412011 SLC4A3P48751 1232 aa25.57■■□□□ 1.68
ITSN2-205ENST00000412011 TTC22Q5TAA0 569 aa25.57■■□□□ 1.68
ITSN2-205ENST00000412011 USP16Q9Y5T5 823 aa25.57■■□□□ 1.68
ITSN2-205ENST00000412011 DDX58O95786 925 aaKnown RBP25.57■■□□□ 1.68
ITSN2-205ENST00000412011 PAPPAQ13219 1627 aa25.57■■□□□ 1.68
ITSN2-205ENST00000412011 AIMP1Q12904 312 aaKnown RBP25.56■■□□□ 1.68
ITSN2-205ENST00000412011 DDX54Q8TDD1 881 aaKnown RBP25.56■■□□□ 1.68
ITSN2-205ENST00000412011 SSH3Q8TE77 659 aa25.56■■□□□ 1.68
ITSN2-205ENST00000412011 IBTKQ9P2D0 1353 aaPredicted RBP25.55■■□□□ 1.68
ITSN2-205ENST00000412011 MYL6BP14649 208 aa25.55■■□□□ 1.68
ITSN2-205ENST00000412011 C22orf23Q9BZE7 217 aa25.55■■□□□ 1.68
ITSN2-205ENST00000412011 TOGARAM1Q9Y4F4 1720 aa25.55■■□□□ 1.68
ITSN2-205ENST00000412011 USP35Q9P2H5 1018 aa25.54■■□□□ 1.68
ITSN2-205ENST00000412011 DAXXQ9UER7 740 aaPredicted RBP25.54■■□□□ 1.68
ITSN2-205ENST00000412011 POLA2Q14181 598 aa25.54■■□□□ 1.68
ITSN2-205ENST00000412011 PPP1R42Q7Z4L9 355 aa25.54■■□□□ 1.68
ITSN2-205ENST00000412011 TBC1D9Q6ZT07 1266 aa25.53■■□□□ 1.68
ITSN2-205ENST00000412011 LRP10Q7Z4F1 713 aa25.53■■□□□ 1.68
ITSN2-205ENST00000412011 LRRCC1Q9C099 1032 aa25.53■■□□□ 1.68
ITSN2-205ENST00000412011 CWF19L2Q2TBE0 894 aaKnown RBP25.52■■□□□ 1.68
ITSN2-205ENST00000412011 LINS1Q8NG48 757 aa25.52■■□□□ 1.68
ITSN2-205ENST00000412011 XAGE3Q8WTP9 111 aa25.52■■□□□ 1.68
ITSN2-205ENST00000412011 PHLPP1O60346 1717 aa25.52■■□□□ 1.68
ITSN2-205ENST00000412011 KCPQ6ZWJ8 1503 aa25.51■■□□□ 1.67
ITSN2-205ENST00000412011 CDC45O75419 566 aa25.51■■□□□ 1.67
ITSN2-205ENST00000412011 COPS6Q7L5N1 327 aa25.51■■□□□ 1.67
ITSN2-205ENST00000412011 RIC3Q7Z5B4 369 aa25.51■■□□□ 1.67
ITSN2-205ENST00000412011 C9orf78Q9NZ63 289 aaPredicted RBP25.51■■□□□ 1.67
ITSN2-205ENST00000412011 OSBPL3Q9H4L5 887 aa25.49■■□□□ 1.67
ITSN2-205ENST00000412011 SALL3Q9BXA9 1300 aa25.49■■□□□ 1.67
ITSN2-205ENST00000412011 SRGAP3O43295 1099 aa25.49■■□□□ 1.67
ITSN2-205ENST00000412011 TUBGCP6Q96RT7 1819 aa25.49■■□□□ 1.67
ITSN2-205ENST00000412011 DISP2A7MBM2 1401 aa25.48■■□□□ 1.67
ITSN2-205ENST00000412011 PIP4K2AP48426 406 aaPredicted RBP25.48■■□□□ 1.67
ITSN2-205ENST00000412011 PDE1AP54750 535 aa25.48■■□□□ 1.67
ITSN2-205ENST00000412011 PLCH1Q4KWH8 1693 aa25.48■■□□□ 1.67
ITSN2-205ENST00000412011 ARFGEF2Q9Y6D5 1785 aa25.48■■□□□ 1.67
ITSN2-205ENST00000412011 UTYO14607 1347 aa25.47■■□□□ 1.67
ITSN2-205ENST00000412011 IGKV5-2P06315 115 aa25.47■■□□□ 1.67
ITSN2-205ENST00000412011 TNS2Q63HR2 1409 aa25.47■■□□□ 1.67
ITSN2-205ENST00000412011 WNK3Q9BYP7 1800 aa25.46■■□□□ 1.67
ITSN2-205ENST00000412011 MTX1Q13505 466 aa25.46■■□□□ 1.67
ITSN2-205ENST00000412011 GRM8O00222 908 aa25.46■■□□□ 1.67
ITSN2-205ENST00000412011 RAB11FIP3O75154 756 aa25.46■■□□□ 1.67
ITSN2-205ENST00000412011 SURF6O75683 361 aaKnown RBP25.46■■□□□ 1.67
ITSN2-205ENST00000412011 SDSP20132 328 aa25.46■■□□□ 1.67
ITSN2-205ENST00000412011 HDAC5Q9UQL6 1122 aa25.46■■□□□ 1.67
ITSN2-205ENST00000412011 AFDNP55196 1824 aaKnown RBP25.46■■□□□ 1.67
ITSN2-205ENST00000412011 RBM25P49756 843 aaKnown RBP25.45■■□□□ 1.66
ITSN2-205ENST00000412011 BECN1Q14457 450 aa25.45■■□□□ 1.66
ITSN2-205ENST00000412011 ANKRD13DQ6ZTN6 518 aa25.45■■□□□ 1.66
ITSN2-205ENST00000412011 METTL22Q9BUU2 404 aaPredicted RBP25.45■■□□□ 1.66
ITSN2-205ENST00000412011 ITGB4P16144 1822 aa25.45■■□□□ 1.66
ITSN2-205ENST00000412011 ERBB4Q15303 1308 aa25.44■■□□□ 1.66
ITSN2-205ENST00000412011 NEXNQ0ZGT2 675 aa25.44■■□□□ 1.66
ITSN2-205ENST00000412011 NEURL1BA8MQ27 555 aa25.43■■□□□ 1.66
ITSN2-205ENST00000412011 MYD88Q99836 296 aa25.43■■□□□ 1.66
ITSN2-205ENST00000412011 SUCLG2Q96I99 432 aa25.43■■□□□ 1.66
ITSN2-205ENST00000412011 MX1P20591 662 aa25.42■■□□□ 1.66
ITSN2-205ENST00000412011 TMOD3Q9NYL9 352 aa25.42■■□□□ 1.66
ITSN2-205ENST00000412011 NBPF26B4DH59 902 aa25.41■■□□□ 1.66
ITSN2-205ENST00000412011 PTCD1O75127 700 aaKnown RBP25.41■■□□□ 1.66
ITSN2-205ENST00000412011 NBPF14Q5TI25 921 aa25.41■■□□□ 1.66
ITSN2-205ENST00000412011 NBPF10Q6P3W6 841 aaKnown RBP25.41■■□□□ 1.66
ITSN2-205ENST00000412011 NBPF15Q8N660 670 aa25.41■■□□□ 1.66
ITSN2-205ENST00000412011 KAZALD1Q96I82 304 aa25.41■■□□□ 1.66
ITSN2-205ENST00000412011 IL1RAPL2Q9NP60 686 aa25.41■■□□□ 1.66
ITSN2-205ENST00000412011 STAP2Q9UGK3 403 aa25.41■■□□□ 1.66
ITSN2-205ENST00000412011 NRAPQ86VF7 1730 aa25.41■■□□□ 1.66
ITSN2-205ENST00000412011 GCKRQ14397 625 aa25.4■■□□□ 1.66
ITSN2-205ENST00000412011 RHPN1Q8TCX5 695 aa25.4■■□□□ 1.66
ITSN2-205ENST00000412011 TSHZ3Q63HK5 1081 aa25.4■■□□□ 1.66
ITSN2-205ENST00000412011 KIF1BPQ96EK5 621 aa25.4■■□□□ 1.66
ITSN2-205ENST00000412011 HSP90AB4PQ58FF6 505 aa25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms