RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 ITPK1Q13572 414 aa16.09■□□□□ 0.17
PMS1-204ENST00000409823 AIMP1Q12904 312 aaKnown RBP16.09■□□□□ 0.17
PMS1-204ENST00000409823 PANK1Q8TE04 598 aa16.09■□□□□ 0.17
PMS1-204ENST00000409823 SMARCC1Q92922 1105 aaPredicted RBP16.09■□□□□ 0.17
PMS1-204ENST00000409823 RNF123Q5XPI4 1314 aa16.09■□□□□ 0.17
PMS1-204ENST00000409823 UBR2Q8IWV8 1755 aa16.09■□□□□ 0.17
PMS1-204ENST00000409823 FKBP8Q14318 412 aa16.09■□□□□ 0.17
PMS1-204ENST00000409823 PDIA6Q15084 440 aa16.09■□□□□ 0.17
PMS1-204ENST00000409823 DBF4Q9UBU7 674 aaPredicted RBP16.09■□□□□ 0.17
PMS1-204ENST00000409823 BTAF1O14981 1849 aa16.08■□□□□ 0.16
PMS1-204ENST00000409823 SBF2Q86WG5 1849 aa16.08■□□□□ 0.16
PMS1-204ENST00000409823 TRIM27P14373 513 aa16.08■□□□□ 0.16
PMS1-204ENST00000409823 NHSQ6T4R5 1651 aa16.08■□□□□ 0.16
PMS1-204ENST00000409823 APBA3O96018 575 aa16.08■□□□□ 0.16
PMS1-204ENST00000409823 NBPF26B4DH59 902 aa16.07■□□□□ 0.16
PMS1-204ENST00000409823 RLBP1P12271 317 aa16.07■□□□□ 0.16
PMS1-204ENST00000409823 FLIIQ13045 1269 aa16.07■□□□□ 0.16
PMS1-204ENST00000409823 NBPF14Q5TI25 921 aa16.07■□□□□ 0.16
PMS1-204ENST00000409823 ZKSCAN2Q63HK3 967 aa16.07■□□□□ 0.16
PMS1-204ENST00000409823 NBPF10Q6P3W6 841 aaKnown RBP16.07■□□□□ 0.16
PMS1-204ENST00000409823 VSIG10Q8N0Z9 540 aa16.07■□□□□ 0.16
PMS1-204ENST00000409823 NBPF15Q8N660 670 aa16.07■□□□□ 0.16
PMS1-204ENST00000409823 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.07■□□□□ 0.16
PMS1-204ENST00000409823 SOS1Q07889 1333 aaPredicted RBP16.07■□□□□ 0.16
PMS1-204ENST00000409823 F6X3S4 739 aa16.07■□□□□ 0.16
PMS1-204ENST00000409823 STARD3NLO95772 234 aa16.07■□□□□ 0.16
PMS1-204ENST00000409823 NEFLP07196 543 aa16.07■□□□□ 0.16
PMS1-204ENST00000409823 FKBP5Q13451 457 aaPredicted RBP16.07■□□□□ 0.16
PMS1-204ENST00000409823 ARXQ96QS3 562 aa16.07■□□□□ 0.16
PMS1-204ENST00000409823 CCNL1Q9UK58 526 aaPredicted RBP16.07■□□□□ 0.16
PMS1-204ENST00000409823 KIF16BQ96L93 1317 aa16.07■□□□□ 0.16
PMS1-204ENST00000409823 CYP19A1P11511 503 aaPredicted RBP16.06■□□□□ 0.16
PMS1-204ENST00000409823 ATF7IPQ6VMQ6 1270 aa16.06■□□□□ 0.16
PMS1-204ENST00000409823 GTF3C3Q9Y5Q9 886 aa16.06■□□□□ 0.16
PMS1-204ENST00000409823 SMIM5Q71RC9 77 aa16.06■□□□□ 0.16
PMS1-204ENST00000409823 FTSJ3Q8IY81 847 aaKnown RBP16.05■□□□□ 0.16
PMS1-204ENST00000409823 DDX21Q9NR30 783 aaKnown RBP eCLIP16.05■□□□□ 0.16
PMS1-204ENST00000409823 ZBTB1Q9Y2K1 713 aa16.05■□□□□ 0.16
PMS1-204ENST00000409823 LINC00116Q8NCU8 138 aa16.05■□□□□ 0.16
PMS1-204ENST00000409823 LRRC4BQ9NT99 713 aa16.05■□□□□ 0.16
PMS1-204ENST00000409823 SRCAPQ6ZRS2 3230 aa16.05■□□□□ 0.16
PMS1-204ENST00000409823 TEX13AQ9BXU3 409 aaPredicted RBP16.04■□□□□ 0.16
PMS1-204ENST00000409823 IPO8O15397 1037 aaKnown RBP16.04■□□□□ 0.16
PMS1-204ENST00000409823 SLC4A10Q6U841 1118 aa16.04■□□□□ 0.16
PMS1-204ENST00000409823 COPS6Q7L5N1 327 aa16.04■□□□□ 0.16
PMS1-204ENST00000409823 XAGE3Q8WTP9 111 aa16.04■□□□□ 0.16
PMS1-204ENST00000409823 COG6Q9Y2V7 657 aa16.04■□□□□ 0.16
PMS1-204ENST00000409823 CRKLP46109 303 aaKnown RBP16.04■□□□□ 0.16
PMS1-204ENST00000409823 BRPF1P55201 1214 aaPredicted RBP16.04■□□□□ 0.16
PMS1-204ENST00000409823 LRP10Q7Z4F1 713 aa16.03■□□□□ 0.16
PMS1-204ENST00000409823 DZIP1LQ8IYY4 767 aaKnown RBP16.03■□□□□ 0.16
PMS1-204ENST00000409823 PROM2Q8N271 834 aa16.03■□□□□ 0.16
PMS1-204ENST00000409823 CRBNQ96SW2 442 aa16.03■□□□□ 0.16
PMS1-204ENST00000409823 HYPKQ9NX55 129 aa16.03■□□□□ 0.16
PMS1-204ENST00000409823 PI4KAP2A4QPH2 592 aa16.02■□□□□ 0.16
PMS1-204ENST00000409823 PI4KAP1Q8N8J0 262 aa16.02■□□□□ 0.16
PMS1-204ENST00000409823 CHMP4AQ9BY43 222 aa16.02■□□□□ 0.16
PMS1-204ENST00000409823 INTS5Q6P9B9 1019 aaKnown RBP16.02■□□□□ 0.15
PMS1-204ENST00000409823 EXOC6Q8TAG9 804 aa16.02■□□□□ 0.15
PMS1-204ENST00000409823 TTLL7Q6ZT98 887 aa16.01■□□□□ 0.15
PMS1-204ENST00000409823 TMEM57Q8N5G2 664 aa16.01■□□□□ 0.15
PMS1-204ENST00000409823 TXNRD1Q16881 649 aa16.01■□□□□ 0.15
PMS1-204ENST00000409823 EN1Q05925 392 aaPredicted RBP16■□□□□ 0.15
PMS1-204ENST00000409823 ITPRIPQ8IWB1 547 aa16■□□□□ 0.15
PMS1-204ENST00000409823 CCDC87Q9NVE4 849 aa16■□□□□ 0.15
PMS1-204ENST00000409823 PTPRCP08575 1304 aa16■□□□□ 0.15
PMS1-204ENST00000409823 TJP1Q07157 1748 aa16■□□□□ 0.15
PMS1-204ENST00000409823 GOLGB1Q14789 3259 aaKnown RBP16■□□□□ 0.15
PMS1-204ENST00000409823 DEFB132Q7Z7B7 95 aa15.99■□□□□ 0.15
PMS1-204ENST00000409823 ARHGAP45Q92619 1136 aa15.99■□□□□ 0.15
PMS1-204ENST00000409823 API5Q9BZZ5 524 aaKnown RBP15.99■□□□□ 0.15
PMS1-204ENST00000409823 ZBTB3Q9H5J0 574 aa15.99■□□□□ 0.15
PMS1-204ENST00000409823 AMIGO3Q86WK7 504 aa15.99■□□□□ 0.15
PMS1-204ENST00000409823 TBC1D2BQ9UPU7 963 aa15.99■□□□□ 0.15
PMS1-204ENST00000409823 MAP3K2Q9Y2U5 619 aa15.99■□□□□ 0.15
PMS1-204ENST00000409823 PDE3AQ14432 1141 aa15.98■□□□□ 0.15
PMS1-204ENST00000409823 RIC3Q7Z5B4 369 aa15.98■□□□□ 0.15
PMS1-204ENST00000409823 LAMB4A4D0S4 1761 aa15.98■□□□□ 0.15
PMS1-204ENST00000409823 GNPATO15228 680 aa15.98■□□□□ 0.15
PMS1-204ENST00000409823 EZH2Q15910 746 aaKnown RBP15.98■□□□□ 0.15
PMS1-204ENST00000409823 ANKRD13DQ6ZTN6 518 aa15.98■□□□□ 0.15
PMS1-204ENST00000409823 NPM2Q86SE8 214 aaKnown RBP15.98■□□□□ 0.15
PMS1-204ENST00000409823 ADCY9O60503 1353 aa15.97■□□□□ 0.15
PMS1-204ENST00000409823 PLSCR1O15162 318 aa15.97■□□□□ 0.15
PMS1-204ENST00000409823 PHF14O94880 888 aa15.97■□□□□ 0.15
PMS1-204ENST00000409823 ERBB4Q15303 1308 aa15.97■□□□□ 0.15
PMS1-204ENST00000409823 SF3B2Q13435 895 aaKnown RBP15.97■□□□□ 0.15
PMS1-204ENST00000409823 ABCC4O15439 1325 aa15.97■□□□□ 0.15
PMS1-204ENST00000409823 KSR2Q6VAB6 950 aa15.96■□□□□ 0.15
PMS1-204ENST00000409823 MYH14Q7Z406 1995 aaKnown RBP15.96■□□□□ 0.15
PMS1-204ENST00000409823 DDX58O95786 925 aaKnown RBP15.96■□□□□ 0.15
PMS1-204ENST00000409823 DNAAF4Q8WXU2 420 aa15.96■□□□□ 0.15
PMS1-204ENST00000409823 IL6STP40189 918 aaPredicted RBP15.95■□□□□ 0.14
PMS1-204ENST00000409823 MVPQ14764 893 aaKnown RBP15.95■□□□□ 0.14
PMS1-204ENST00000409823 SLC27A3Q5K4L6 730 aa15.95■□□□□ 0.14
PMS1-204ENST00000409823 EIF5P55010 431 aaKnown RBP15.95■□□□□ 0.14
PMS1-204ENST00000409823 CWF19L2Q2TBE0 894 aaKnown RBP15.95■□□□□ 0.14
PMS1-204ENST00000409823 LY75O60449 1722 aa15.95■□□□□ 0.14
PMS1-204ENST00000409823 ATP5J2-PTCD1G3V325 749 aa15.94■□□□□ 0.14
PMS1-204ENST00000409823 DZIP3Q86Y13 1208 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms