RNA–Protein interactions for RNA: ENST00000409681.1

POLR1A-203, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5 BASIC

Gene POLR1A, Length 6,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-203ENST00000409681 KSR2Q6VAB6 950 aa12.14□□□□□ -0.47
POLR1A-203ENST00000409681 BRINP3Q76B58 766 aa12.14□□□□□ -0.47
POLR1A-203ENST00000409681 ARHGAP45Q92619 1136 aa12.14□□□□□ -0.47
POLR1A-203ENST00000409681 ABCF2Q9UG63 623 aa12.14□□□□□ -0.47
POLR1A-203ENST00000409681 PTPRMP28827 1452 aa12.13□□□□□ -0.47
POLR1A-203ENST00000409681 FAM196AQ6ZSG2 479 aa12.13□□□□□ -0.47
POLR1A-203ENST00000409681 DZIP1Q86YF9 867 aaKnown RBP12.13□□□□□ -0.47
POLR1A-203ENST00000409681 ZNF219Q9P2Y4 722 aaPredicted RBP12.13□□□□□ -0.47
POLR1A-203ENST00000409681 CARD10Q9BWT7 1032 aa12.13□□□□□ -0.47
POLR1A-203ENST00000409681 LMTK2Q8IWU2 1503 aa12.13□□□□□ -0.47
POLR1A-203ENST00000409681 SPTY2D1Q68D10 685 aaPredicted RBP12.13□□□□□ -0.47
POLR1A-203ENST00000409681 CHPF2Q9P2E5 772 aa12.13□□□□□ -0.47
POLR1A-203ENST00000409681 ATP5J2-PTCD1G3V325 749 aa12.13□□□□□ -0.47
POLR1A-203ENST00000409681 UBE3BQ7Z3V4 1068 aa12.13□□□□□ -0.47
POLR1A-203ENST00000409681 RTL1A6NKG5 1358 aa12.13□□□□□ -0.47
POLR1A-203ENST00000409681 ADGRL3Q9HAR2 1447 aa12.13□□□□□ -0.47
POLR1A-203ENST00000409681 MAP3K12Q12852 859 aa12.13□□□□□ -0.47
POLR1A-203ENST00000409681 IDH1O75874 414 aaKnown RBP12.12□□□□□ -0.47
POLR1A-203ENST00000409681 PRIM1P49642 420 aaKnown RBP12.12□□□□□ -0.47
POLR1A-203ENST00000409681 PARP10Q53GL7 1025 aa12.12□□□□□ -0.47
POLR1A-203ENST00000409681 CDC42BPBQ9Y5S2 1711 aa12.12□□□□□ -0.47
POLR1A-203ENST00000409681 HOXB7P09629 217 aa12.12□□□□□ -0.47
POLR1A-203ENST00000409681 CCDC43Q96MW1 224 aaKnown RBP12.12□□□□□ -0.47
POLR1A-203ENST00000409681 PDZRN3Q9UPQ7 1066 aa12.12□□□□□ -0.47
POLR1A-203ENST00000409681 F6X3S4 739 aa12.12□□□□□ -0.47
POLR1A-203ENST00000409681 PDE4AP27815 886 aa12.12□□□□□ -0.47
POLR1A-203ENST00000409681 MCTP1Q6DN14 999 aa12.12□□□□□ -0.47
POLR1A-203ENST00000409681 AIDAQ96BJ3 306 aa12.12□□□□□ -0.47
POLR1A-203ENST00000409681 RSPH6AQ9H0K4 717 aa12.12□□□□□ -0.47
POLR1A-203ENST00000409681 INSRP06213 1382 aa12.12□□□□□ -0.47
POLR1A-203ENST00000409681 GLRX3O76003 335 aaKnown RBP12.12□□□□□ -0.47
POLR1A-203ENST00000409681 UNC5CLQ8IV45 518 aa12.12□□□□□ -0.47
POLR1A-203ENST00000409681 TDO2P48775 406 aa12.11□□□□□ -0.47
POLR1A-203ENST00000409681 CCDC47Q96A33 483 aaKnown RBP12.11□□□□□ -0.47
POLR1A-203ENST00000409681 SLC52A2Q9HAB3 445 aa12.11□□□□□ -0.47
POLR1A-203ENST00000409681 PLA2R1Q13018 1463 aa12.11□□□□□ -0.47
POLR1A-203ENST00000409681 UNC13BO14795 1591 aa12.11□□□□□ -0.47
POLR1A-203ENST00000409681 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.11□□□□□ -0.472e-6■■□□□ 12.2
POLR1A-203ENST00000409681 THRAP3Q9Y2W1 955 aaKnown RBP12.11□□□□□ -0.47
POLR1A-203ENST00000409681 ZNF790Q6PG37 636 aa12.11□□□□□ -0.47
POLR1A-203ENST00000409681 KIAA0232Q92628 1395 aa12.11□□□□□ -0.47
POLR1A-203ENST00000409681 RRP12Q5JTH9 1297 aaKnown RBP12.11□□□□□ -0.47
POLR1A-203ENST00000409681 KIF24Q5T7B8 1368 aa12.11□□□□□ -0.47
POLR1A-203ENST00000409681 LRRFIP2Q9Y608 721 aaKnown RBP12.1□□□□□ -0.47
POLR1A-203ENST00000409681 MYO1BO43795 1136 aa12.1□□□□□ -0.47
POLR1A-203ENST00000409681 ATP2B2Q01814 1243 aa12.1□□□□□ -0.47
POLR1A-203ENST00000409681 CHD1LQ86WJ1 897 aa12.1□□□□□ -0.47
POLR1A-203ENST00000409681 EYA3Q99504 573 aa12.1□□□□□ -0.47
POLR1A-203ENST00000409681 SLKQ9H2G2 1235 aaPredicted RBP12.1□□□□□ -0.47
POLR1A-203ENST00000409681 CCDC87Q9NVE4 849 aa12.1□□□□□ -0.47
POLR1A-203ENST00000409681 HDAC9Q9UKV0 1011 aa12.1□□□□□ -0.47
POLR1A-203ENST00000409681 TTF1Q15361 905 aaPredicted RBP12.1□□□□□ -0.47
POLR1A-203ENST00000409681 USP6P35125 1406 aa12.1□□□□□ -0.47
POLR1A-203ENST00000409681 UQCRFS1P1P0C7P4 283 aa12.09□□□□□ -0.47
POLR1A-203ENST00000409681 USP5P45974 858 aa12.09□□□□□ -0.47
POLR1A-203ENST00000409681 ARHGEF25Q86VW2 580 aa12.09□□□□□ -0.47
POLR1A-203ENST00000409681 IL1RAPL2Q9NP60 686 aa12.09□□□□□ -0.47
POLR1A-203ENST00000409681 CRACR2BQ8N4Y2 399 aaPredicted RBP12.09□□□□□ -0.47
POLR1A-203ENST00000409681 LINS1Q8NG48 757 aa12.09□□□□□ -0.47
POLR1A-203ENST00000409681 SPATA31A3Q5VYP0 1347 aa12.09□□□□□ -0.47
POLR1A-203ENST00000409681 PER1O15534 1290 aaPredicted RBP12.09□□□□□ -0.47
POLR1A-203ENST00000409681 KDM5AP29375 1690 aaKnown RBP12.09□□□□□ -0.47
POLR1A-203ENST00000409681 RNF17Q9BXT8 1623 aaKnown RBP12.09□□□□□ -0.47
POLR1A-203ENST00000409681 ZGPATQ8N5A5 531 aaKnown RBP12.09□□□□□ -0.47
POLR1A-203ENST00000409681 JDP2Q8WYK2 163 aa12.09□□□□□ -0.47
POLR1A-203ENST00000409681 RBM17Q96I25 401 aaKnown RBP12.09□□□□□ -0.47
POLR1A-203ENST00000409681 SMC3Q9UQE7 1217 aa12.09□□□□□ -0.47
POLR1A-203ENST00000409681 AATKQ6ZMQ8 1374 aa12.09□□□□□ -0.47
POLR1A-203ENST00000409681 GSTO1P78417 241 aa12.09□□□□□ -0.47
POLR1A-203ENST00000409681 KRT27Q7Z3Y8 459 aa12.09□□□□□ -0.47
POLR1A-203ENST00000409681 CNBD1Q8NA66 436 aa12.09□□□□□ -0.47
POLR1A-203ENST00000409681 DDX21Q9NR30 783 aaKnown RBP eCLIP12.09□□□□□ -0.47
POLR1A-203ENST00000409681 WDR17Q8IZU2 1322 aa12.09□□□□□ -0.47
POLR1A-203ENST00000409681 EXOC6BQ9Y2D4 811 aa12.08□□□□□ -0.48
POLR1A-203ENST00000409681 BAG3O95817 575 aa12.08□□□□□ -0.48
POLR1A-203ENST00000409681 ANKRD2Q9GZV1 360 aa12.08□□□□□ -0.48
POLR1A-203ENST00000409681 JCADQ9P266 1359 aa12.08□□□□□ -0.48
POLR1A-203ENST00000409681 POLR3DP05423 398 aaPredicted RBP12.07□□□□□ -0.48
POLR1A-203ENST00000409681 MCM2P49736 904 aa12.07□□□□□ -0.48
POLR1A-203ENST00000409681 MTMR7Q9Y216 660 aa12.07□□□□□ -0.48
POLR1A-203ENST00000409681 INO80Q9ULG1 1556 aaPredicted RBP12.07□□□□□ -0.48
POLR1A-203ENST00000409681 TTLL12Q14166 644 aaPredicted RBP12.07□□□□□ -0.48
POLR1A-203ENST00000409681 KRT32Q14532 448 aa12.07□□□□□ -0.48
POLR1A-203ENST00000409681 GRM8O00222 908 aa12.07□□□□□ -0.48
POLR1A-203ENST00000409681 ANKRD1Q15327 319 aa12.07□□□□□ -0.48
POLR1A-203ENST00000409681 CLTCQ00610 1675 aaKnown RBP12.07□□□□□ -0.48
POLR1A-203ENST00000409681 ANXA1P04083 346 aa12.07□□□□□ -0.48
POLR1A-203ENST00000409681 PHACTR3Q96KR7 559 aa12.07□□□□□ -0.48
POLR1A-203ENST00000409681 UBAC1Q9BSL1 405 aa12.07□□□□□ -0.48
POLR1A-203ENST00000409681 FOXD4L1Q9NU39 408 aa12.07□□□□□ -0.48
POLR1A-203ENST00000409681 ZNF804AQ7Z570 1209 aa12.06□□□□□ -0.48
POLR1A-203ENST00000409681 SPINK5Q9NQ38 1064 aaPredicted RBP12.06□□□□□ -0.48
POLR1A-203ENST00000409681 KIAA2012Q0VF49 1180 aa12.06□□□□□ -0.48
POLR1A-203ENST00000409681 OGFOD1Q8N543 542 aa12.06□□□□□ -0.48
POLR1A-203ENST00000409681 MX1P20591 662 aa12.06□□□□□ -0.48
POLR1A-203ENST00000409681 C22orf23Q9BZE7 217 aa12.06□□□□□ -0.48
POLR1A-203ENST00000409681 HOOK1Q9UJC3 728 aaKnown RBP12.06□□□□□ -0.48
POLR1A-203ENST00000409681 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.06□□□□□ -0.48
POLR1A-203ENST00000409681 CCDC69A6NI79 296 aa12.06□□□□□ -0.48
POLR1A-203ENST00000409681 TRIM27P14373 513 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms