RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 LEKR1Q6ZMV7 388 aa9.79□□□□□ -0.84
SCN9A-203ENST00000409672 KRT28Q7Z3Y7 464 aa9.79□□□□□ -0.84
SCN9A-203ENST00000409672 IFIT3O14879 490 aaKnown RBP9.78□□□□□ -0.84
SCN9A-203ENST00000409672 CFAP100Q494V2 611 aa9.78□□□□□ -0.84
SCN9A-203ENST00000409672 CFAP45Q9UL16 551 aa9.78□□□□□ -0.84
SCN9A-203ENST00000409672 UQCRHP07919 91 aa9.78□□□□□ -0.84
SCN9A-203ENST00000409672 TSG101Q99816 390 aa9.78□□□□□ -0.84
SCN9A-203ENST00000409672 CABLES1Q8TDN4 633 aa9.78□□□□□ -0.84
SCN9A-203ENST00000409672 TDRD12Q587J7 1177 aaKnown RBP9.78□□□□□ -0.84
SCN9A-203ENST00000409672 APBB1IPQ7Z5R6 666 aaPredicted RBP9.78□□□□□ -0.84
SCN9A-203ENST00000409672 STX8Q9UNK0 236 aa9.78□□□□□ -0.84
SCN9A-203ENST00000409672 ANKRD18BA2A2Z9 1011 aa9.78□□□□□ -0.84
SCN9A-203ENST00000409672 ATF7IPQ6VMQ6 1270 aa9.78□□□□□ -0.84
SCN9A-203ENST00000409672 SLC12A7Q9Y666 1083 aa9.78□□□□□ -0.84
SCN9A-203ENST00000409672 ZNF213O14771 459 aa9.78□□□□□ -0.84
SCN9A-203ENST00000409672 SPOUT1Q5T280 376 aaKnown RBP9.78□□□□□ -0.84
SCN9A-203ENST00000409672 OGFOD1Q8N543 542 aa9.78□□□□□ -0.84
SCN9A-203ENST00000409672 POLD1P28340 1107 aa9.78□□□□□ -0.84
SCN9A-203ENST00000409672 MAP3K12Q12852 859 aa9.78□□□□□ -0.84
SCN9A-203ENST00000409672 SRRTQ9BXP5 876 aaKnown RBP9.78□□□□□ -0.84
SCN9A-203ENST00000409672 PKD2L1Q9P0L9 805 aa9.78□□□□□ -0.84
SCN9A-203ENST00000409672 ANKRD1Q15327 319 aa9.77□□□□□ -0.84
SCN9A-203ENST00000409672 IQCA1Q86XH1 822 aa9.77□□□□□ -0.84
SCN9A-203ENST00000409672 CCDC102AQ96A19 550 aa9.77□□□□□ -0.84
SCN9A-203ENST00000409672 CCDC39Q9UFE4 941 aa9.77□□□□□ -0.84
SCN9A-203ENST00000409672 TRAK2O60296 914 aa9.77□□□□□ -0.84
SCN9A-203ENST00000409672 SETD1BQ9UPS6 1966 aaKnown RBP9.77□□□□□ -0.84
SCN9A-203ENST00000409672 CCDC91Q7Z6B0 441 aa9.77□□□□□ -0.85
SCN9A-203ENST00000409672 GINS2Q9Y248 185 aa9.77□□□□□ -0.85
SCN9A-203ENST00000409672 CTCFLQ8NI51 663 aaPredicted RBP9.77□□□□□ -0.85
SCN9A-203ENST00000409672 SETDB2Q96T68 719 aa9.77□□□□□ -0.85
SCN9A-203ENST00000409672 TMEM110-MUSTN1A8MSY1 372 aa9.77□□□□□ -0.85
SCN9A-203ENST00000409672 LMOD1P29536 600 aaPredicted RBP9.77□□□□□ -0.85
SCN9A-203ENST00000409672 FAM170AA1A519 330 aa9.77□□□□□ -0.85
SCN9A-203ENST00000409672 DUSP27Q5VZP5 1158 aa9.77□□□□□ -0.85
SCN9A-203ENST00000409672 PNISRQ8TF01 805 aaKnown RBP9.77□□□□□ -0.85
SCN9A-203ENST00000409672 ZNF692Q9BU19 519 aaPredicted RBP9.77□□□□□ -0.85
SCN9A-203ENST00000409672 ERICH4A6NGS2 130 aa9.77□□□□□ -0.85
SCN9A-203ENST00000409672 CALM1P0DP23 149 aa9.77□□□□□ -0.85
SCN9A-203ENST00000409672 CALM2P0DP24 149 aa9.77□□□□□ -0.85
SCN9A-203ENST00000409672 CALM3P0DP25 149 aa9.77□□□□□ -0.85
SCN9A-203ENST00000409672 KCNA4P22459 653 aa9.77□□□□□ -0.85
SCN9A-203ENST00000409672 PPP2R1AP30153 589 aa9.77□□□□□ -0.85
SCN9A-203ENST00000409672 CEP63Q96MT8 703 aa9.77□□□□□ -0.85
SCN9A-203ENST00000409672 UIMC1Q96RL1 719 aa9.76□□□□□ -0.85
SCN9A-203ENST00000409672 EHMT1Q9H9B1 1298 aa9.76□□□□□ -0.85
SCN9A-203ENST00000409672 AKAP2Q9Y2D5 859 aa9.76□□□□□ -0.85
SCN9A-203ENST00000409672 ANXA1P04083 346 aa9.76□□□□□ -0.85
SCN9A-203ENST00000409672 IDEP14735 1019 aa9.76□□□□□ -0.85
SCN9A-203ENST00000409672 SH3BP5O60239 455 aa9.76□□□□□ -0.85
SCN9A-203ENST00000409672 KIAA0754O94854 1291 aa9.76□□□□□ -0.85
SCN9A-203ENST00000409672 TAF7Q15545 349 aaPredicted RBP9.76□□□□□ -0.85
SCN9A-203ENST00000409672 CTNNA3Q9UI47 895 aa9.76□□□□□ -0.85
SCN9A-203ENST00000409672 ERBINQ96RT1 1412 aa9.76□□□□□ -0.85
SCN9A-203ENST00000409672 A0A087WZG4 1122 aa9.76□□□□□ -0.85
SCN9A-203ENST00000409672 NOP2P46087 812 aaKnown RBP9.76□□□□□ -0.85
SCN9A-203ENST00000409672 HOOK3Q86VS8 718 aa9.76□□□□□ -0.85
SCN9A-203ENST00000409672 GOLIM4O00461 696 aa9.76□□□□□ -0.85
SCN9A-203ENST00000409672 PHACTR2O75167 634 aa9.76□□□□□ -0.85
SCN9A-203ENST00000409672 HLA-DOAP06340 250 aa9.76□□□□□ -0.85
SCN9A-203ENST00000409672 SSRP1Q08945 709 aaKnown RBP9.76□□□□□ -0.85
SCN9A-203ENST00000409672 DDX23Q9BUQ8 820 aaKnown RBP9.76□□□□□ -0.85
SCN9A-203ENST00000409672 CETN2P41208 172 aa9.76□□□□□ -0.85
SCN9A-203ENST00000409672 PRPF40BQ6NWY9 871 aaKnown RBP9.76□□□□□ -0.85
SCN9A-203ENST00000409672 UTP14AQ9BVJ6 771 aaKnown RBP9.76□□□□□ -0.85
SCN9A-203ENST00000409672 KRT85P78386 507 aa9.76□□□□□ -0.85
SCN9A-203ENST00000409672 RRBP1Q9P2E9 1410 aaKnown RBP9.76□□□□□ -0.85
SCN9A-203ENST00000409672 TMEM266Q2M3C6 531 aa9.76□□□□□ -0.85
SCN9A-203ENST00000409672 TSHZ3Q63HK5 1081 aa9.76□□□□□ -0.85
SCN9A-203ENST00000409672 CATIPQ7Z7H3 387 aa9.75□□□□□ -0.85
SCN9A-203ENST00000409672 NAIPQ13075 1403 aa9.75□□□□□ -0.85
SCN9A-203ENST00000409672 BAG4O95429 457 aaKnown RBP9.75□□□□□ -0.85
SCN9A-203ENST00000409672 ZBED9Q6R2W3 1325 aa9.75□□□□□ -0.85
SCN9A-203ENST00000409672 FBLN1P23142 703 aa9.75□□□□□ -0.85
SCN9A-203ENST00000409672 ZYXQ15942 572 aaKnown RBP9.75□□□□□ -0.85
SCN9A-203ENST00000409672 KAT14Q9H8E8 782 aa9.75□□□□□ -0.85
SCN9A-203ENST00000409672 CEP131Q9UPN4 1083 aa9.75□□□□□ -0.85
SCN9A-203ENST00000409672 MAP3K2Q9Y2U5 619 aa9.75□□□□□ -0.85
SCN9A-203ENST00000409672 CCDC192P0DO97 292 aa9.75□□□□□ -0.85
SCN9A-203ENST00000409672 BIRC2Q13490 618 aa9.75□□□□□ -0.85
SCN9A-203ENST00000409672 HSP90AA4PQ58FG1 418 aa9.75□□□□□ -0.85
SCN9A-203ENST00000409672 LDHAL6AQ6ZMR3 332 aa9.75□□□□□ -0.85
SCN9A-203ENST00000409672 UPF3BQ9BZI7 483 aaKnown RBP9.75□□□□□ -0.85
SCN9A-203ENST00000409672 INCENPQ9NQS7 918 aa9.75□□□□□ -0.85
SCN9A-203ENST00000409672 BIN1O00499 593 aa9.75□□□□□ -0.85
SCN9A-203ENST00000409672 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.75□□□□□ -0.85
SCN9A-203ENST00000409672 TCHPQ9BT92 498 aa9.75□□□□□ -0.85
SCN9A-203ENST00000409672 SLF2Q8IX21 1173 aa9.75□□□□□ -0.85
SCN9A-203ENST00000409672 KIF7Q2M1P5 1343 aa9.75□□□□□ -0.85
SCN9A-203ENST00000409672 TSPY3P0CV98 308 aa9.74□□□□□ -0.85
SCN9A-203ENST00000409672 TSPY8P0CW00 308 aa9.74□□□□□ -0.85
SCN9A-203ENST00000409672 SPA17Q15506 151 aa9.74□□□□□ -0.85
SCN9A-203ENST00000409672 NUP88Q99567 741 aaPredicted RBP9.74□□□□□ -0.85
SCN9A-203ENST00000409672 FYCO1Q9BQS8 1478 aa9.74□□□□□ -0.85
SCN9A-203ENST00000409672 PRG4Q92954 1404 aaPredicted RBP9.74□□□□□ -0.85
SCN9A-203ENST00000409672 CCDC24Q8N4L8 307 aa9.74□□□□□ -0.85
SCN9A-203ENST00000409672 MPHOSPH6Q99547 160 aaKnown RBP9.74□□□□□ -0.85
SCN9A-203ENST00000409672 LETM1O95202 739 aaPredicted RBP9.74□□□□□ -0.85
SCN9A-203ENST00000409672 FNBP4Q8N3X1 1017 aaPredicted RBP9.74□□□□□ -0.85
SCN9A-203ENST00000409672 NOD1Q9Y239 953 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms