RNA–Protein interactions for RNA: ENST00000405755.6

PDE4D-207, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-207ENST00000405755 HYPKQ9NX55 129 aa11.81□□□□□ -0.52
PDE4D-207ENST00000405755 C5P01031 1676 aa11.81□□□□□ -0.52
PDE4D-207ENST00000405755 COL14A1Q05707 1796 aaKnown RBP11.8□□□□□ -0.52
PDE4D-207ENST00000405755 FMNL2Q96PY5 1086 aa11.8□□□□□ -0.52
PDE4D-207ENST00000405755 UPF2Q9HAU5 1272 aaKnown RBP11.8□□□□□ -0.52
PDE4D-207ENST00000405755 PHLPP1O60346 1717 aa11.8□□□□□ -0.52
PDE4D-207ENST00000405755 AIMP1Q12904 312 aaKnown RBP11.8□□□□□ -0.52
PDE4D-207ENST00000405755 DDX21Q9NR30 783 aaKnown RBP eCLIP11.8□□□□□ -0.52
PDE4D-207ENST00000405755 MAP3K2Q9Y2U5 619 aa11.8□□□□□ -0.52
PDE4D-207ENST00000405755 NOP58Q9Y2X3 529 aaKnown RBP11.8□□□□□ -0.52
PDE4D-207ENST00000405755 LRRFIP2Q9Y608 721 aaKnown RBP11.8□□□□□ -0.52
PDE4D-207ENST00000405755 COL22A1Q8NFW1 1626 aaPredicted RBP11.79□□□□□ -0.52
PDE4D-207ENST00000405755 DDX58O95786 925 aaKnown RBP11.79□□□□□ -0.52
PDE4D-207ENST00000405755 SNRPA1P09661 255 aaKnown RBP11.79□□□□□ -0.52
PDE4D-207ENST00000405755 MYL6BP14649 208 aa11.79□□□□□ -0.52
PDE4D-207ENST00000405755 USP44Q9H0E7 712 aa11.79□□□□□ -0.52
PDE4D-207ENST00000405755 ADCY9O60503 1353 aa11.79□□□□□ -0.52
PDE4D-207ENST00000405755 SEC24BO95487 1268 aa11.79□□□□□ -0.52
PDE4D-207ENST00000405755 ADAMTS2O95450 1211 aa11.78□□□□□ -0.52
PDE4D-207ENST00000405755 BEND3Q5T5X7 828 aa11.78□□□□□ -0.52
PDE4D-207ENST00000405755 KSR2Q6VAB6 950 aa11.78□□□□□ -0.52
PDE4D-207ENST00000405755 DDRGK1Q96HY6 314 aa11.78□□□□□ -0.52
PDE4D-207ENST00000405755 SHANK3Q9BYB0 1731 aa11.78□□□□□ -0.52
PDE4D-207ENST00000405755 ERVV-2B6SEH9 535 aa11.77□□□□□ -0.52
PDE4D-207ENST00000405755 COL16A1Q07092 1604 aaPredicted RBP11.77□□□□□ -0.53
PDE4D-207ENST00000405755 USP16Q9Y5T5 823 aa11.77□□□□□ -0.53
PDE4D-207ENST00000405755 PNMA6EA0A0J9YXQ4 647 aa11.76□□□□□ -0.53
PDE4D-207ENST00000405755 NBPF7P0C2Y1 421 aaPredicted RBP11.76□□□□□ -0.53
PDE4D-207ENST00000405755 PDIA6Q15084 440 aa11.76□□□□□ -0.53
PDE4D-207ENST00000405755 BMP2KLQ5H9B9 411 aa11.76□□□□□ -0.53
PDE4D-207ENST00000405755 RIC3Q7Z5B4 369 aa11.76□□□□□ -0.53
PDE4D-207ENST00000405755 C9orf78Q9NZ63 289 aaPredicted RBP11.76□□□□□ -0.53
PDE4D-207ENST00000405755 EXOC6BQ9Y2D4 811 aa11.76□□□□□ -0.53
PDE4D-207ENST00000405755 SMARCA5O60264 1052 aaPredicted RBP11.76□□□□□ -0.53
PDE4D-207ENST00000405755 PIP4K2AP48426 406 aaPredicted RBP11.76□□□□□ -0.53
PDE4D-207ENST00000405755 ATP8B2P98198 1209 aa11.76□□□□□ -0.53
PDE4D-207ENST00000405755 NKX1-1Q15270 411 aaPredicted RBP11.76□□□□□ -0.53
PDE4D-207ENST00000405755 NUTM2BA6NNL0 878 aaPredicted RBP11.75□□□□□ -0.53
PDE4D-207ENST00000405755 NUTM2EB1AL46 878 aaPredicted RBP11.75□□□□□ -0.53
PDE4D-207ENST00000405755 CWF19L2Q2TBE0 894 aaKnown RBP11.75□□□□□ -0.53
PDE4D-207ENST00000405755 NUTM2AQ8IVF1 878 aaPredicted RBP11.75□□□□□ -0.53
PDE4D-207ENST00000405755 DAXXQ9UER7 740 aaPredicted RBP11.75□□□□□ -0.53
PDE4D-207ENST00000405755 PTCD1O75127 700 aaKnown RBP11.75□□□□□ -0.53
PDE4D-207ENST00000405755 MFAP1P55081 439 aaKnown RBP11.75□□□□□ -0.53
PDE4D-207ENST00000405755 COPS6Q7L5N1 327 aa11.75□□□□□ -0.53
PDE4D-207ENST00000405755 C16orf71Q8IYS4 520 aaPredicted RBP11.75□□□□□ -0.53
PDE4D-207ENST00000405755 XAGE3Q8WTP9 111 aa11.75□□□□□ -0.53
PDE4D-207ENST00000405755 TMOD3Q9NYL9 352 aa11.75□□□□□ -0.53
PDE4D-207ENST00000405755 LAMB4A4D0S4 1761 aa11.74□□□□□ -0.53
PDE4D-207ENST00000405755 ALDH1L1O75891 902 aa11.74□□□□□ -0.53
PDE4D-207ENST00000405755 NEXNQ0ZGT2 675 aa11.74□□□□□ -0.53
PDE4D-207ENST00000405755 PLEKHM2Q8IWE5 1019 aa11.74□□□□□ -0.53
PDE4D-207ENST00000405755 PLCH1Q4KWH8 1693 aa11.74□□□□□ -0.53
PDE4D-207ENST00000405755 SRGAP3O43295 1099 aa11.74□□□□□ -0.53
PDE4D-207ENST00000405755 LINS1Q8NG48 757 aa11.74□□□□□ -0.53
PDE4D-207ENST00000405755 LRRCC1Q9C099 1032 aa11.74□□□□□ -0.53
PDE4D-207ENST00000405755 PPP1R42Q7Z4L9 355 aa11.73□□□□□ -0.53
PDE4D-207ENST00000405755 OTUD7AQ8TE49 926 aaPredicted RBP11.73□□□□□ -0.53
PDE4D-207ENST00000405755 TOGARAM1Q9Y4F4 1720 aa11.73□□□□□ -0.53
PDE4D-207ENST00000405755 GLI3P10071 1580 aa11.72□□□□□ -0.53
PDE4D-207ENST00000405755 PAPPAQ13219 1627 aa11.72□□□□□ -0.53
PDE4D-207ENST00000405755 UBR2Q8IWV8 1755 aa11.72□□□□□ -0.53
PDE4D-207ENST00000405755 DISP2A7MBM2 1401 aa11.72□□□□□ -0.53
PDE4D-207ENST00000405755 EXOC5O00471 708 aa11.72□□□□□ -0.53
PDE4D-207ENST00000405755 ANKRD13DQ6ZTN6 518 aa11.72□□□□□ -0.53
PDE4D-207ENST00000405755 SSH3Q8TE77 659 aa11.72□□□□□ -0.53
PDE4D-207ENST00000405755 RGS17Q9UGC6 210 aaPredicted RBP11.72□□□□□ -0.53
PDE4D-207ENST00000405755 HDAC5Q9UQL6 1122 aa11.72□□□□□ -0.53
PDE4D-207ENST00000405755 KCPQ6ZWJ8 1503 aa11.71□□□□□ -0.53
PDE4D-207ENST00000405755 IBTKQ9P2D0 1353 aaPredicted RBP11.71□□□□□ -0.53
PDE4D-207ENST00000405755 TTC22Q5TAA0 569 aa11.71□□□□□ -0.53
PDE4D-207ENST00000405755 MYD88Q99836 296 aa11.71□□□□□ -0.53
PDE4D-207ENST00000405755 CCDC9Q9Y3X0 531 aaKnown RBP11.71□□□□□ -0.53
PDE4D-207ENST00000405755 GRM8O00222 908 aa11.71□□□□□ -0.54
PDE4D-207ENST00000405755 SURF6O75683 361 aaKnown RBP11.71□□□□□ -0.54
PDE4D-207ENST00000405755 GSPT1P15170 499 aaKnown RBP11.71□□□□□ -0.54
PDE4D-207ENST00000405755 SYTL4Q96C24 671 aaPredicted RBP11.71□□□□□ -0.54
PDE4D-207ENST00000405755 TBC1D32Q96NH3 1257 aa11.71□□□□□ -0.54
PDE4D-207ENST00000405755 METTL22Q9BUU2 404 aaPredicted RBP11.7□□□□□ -0.54
PDE4D-207ENST00000405755 ERBB4Q15303 1308 aa11.7□□□□□ -0.54
PDE4D-207ENST00000405755 CDC45O75419 566 aa11.7□□□□□ -0.54
PDE4D-207ENST00000405755 IGKV5-2P06315 115 aa11.7□□□□□ -0.54
PDE4D-207ENST00000405755 LRP10Q7Z4F1 713 aa11.7□□□□□ -0.54
PDE4D-207ENST00000405755 C22orf23Q9BZE7 217 aa11.7□□□□□ -0.54
PDE4D-207ENST00000405755 TNS2Q63HR2 1409 aa11.69□□□□□ -0.54
PDE4D-207ENST00000405755 JCADQ9P266 1359 aa11.69□□□□□ -0.54
PDE4D-207ENST00000405755 WNK3Q9BYP7 1800 aa11.69□□□□□ -0.54
PDE4D-207ENST00000405755 A0A0G2JS52 829 aa11.69□□□□□ -0.54
PDE4D-207ENST00000405755 NEURL1BA8MQ27 555 aa11.69□□□□□ -0.54
PDE4D-207ENST00000405755 SLC4A3P48751 1232 aa11.69□□□□□ -0.54
PDE4D-207ENST00000405755 OS9Q13438 667 aaPredicted RBP11.69□□□□□ -0.54
PDE4D-207ENST00000405755 POLA2Q14181 598 aa11.69□□□□□ -0.54
PDE4D-207ENST00000405755 TBC1D9Q6ZT07 1266 aa11.69□□□□□ -0.54
PDE4D-207ENST00000405755 PIGBQ92521 554 aa11.69□□□□□ -0.54
PDE4D-207ENST00000405755 NRAPQ86VF7 1730 aa11.69□□□□□ -0.54
PDE4D-207ENST00000405755 KAT6BQ8WYB5 2073 aa11.69□□□□□ -0.54
PDE4D-207ENST00000405755 A1BGP04217 495 aa11.69□□□□□ -0.54
PDE4D-207ENST00000405755 RBM42Q9BTD8 480 aaKnown RBP11.69□□□□□ -0.54
PDE4D-207ENST00000405755 ANP32EQ9BTT0 268 aa11.69□□□□□ -0.54
PDE4D-207ENST00000405755 IL1RAPL2Q9NP60 686 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms