RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 KCPQ6ZWJ8 1503 aa16.69■□□□□ 0.26
PRAME-204ENST00000403441 DIAPH1O60610 1272 aaKnown RBP16.68■□□□□ 0.26
PRAME-204ENST00000403441 SLC39A6Q13433 755 aa16.68■□□□□ 0.26
PRAME-204ENST00000403441 VSIG10Q8N0Z9 540 aa16.67■□□□□ 0.26
PRAME-204ENST00000403441 RBM46Q8TBY0 533 aaKnown RBP16.67■□□□□ 0.26
PRAME-204ENST00000403441 NARFQ9UHQ1 456 aa16.67■□□□□ 0.26
PRAME-204ENST00000403441 VIRMAQ69YN4 1812 aaKnown RBP16.67■□□□□ 0.26
PRAME-204ENST00000403441 MTHFSDQ2M296 383 aaKnown RBP16.66■□□□□ 0.26
PRAME-204ENST00000403441 ZBTB1Q9Y2K1 713 aa16.66■□□□□ 0.26
PRAME-204ENST00000403441 PER1O15534 1290 aaPredicted RBP16.65■□□□□ 0.26
PRAME-204ENST00000403441 NFIXQ14938 502 aa16.65■□□□□ 0.26
PRAME-204ENST00000403441 CC2D1BQ5T0F9 858 aaKnown RBP16.65■□□□□ 0.26
PRAME-204ENST00000403441 TTC5Q8N0Z6 440 aa16.65■□□□□ 0.26
PRAME-204ENST00000403441 UBR2Q8IWV8 1755 aa16.64■□□□□ 0.25
PRAME-204ENST00000403441 STARD3NLO95772 234 aa16.64■□□□□ 0.25
PRAME-204ENST00000403441 TNRC6CQ9HCJ0 1690 aaKnown RBP16.64■□□□□ 0.25
PRAME-204ENST00000403441 NRXN2Q9P2S2 1712 aa16.64■□□□□ 0.25
PRAME-204ENST00000403441 FSTL1Q12841 308 aa16.63■□□□□ 0.25
PRAME-204ENST00000403441 ZC3H4Q9UPT8 1303 aaKnown RBP16.63■□□□□ 0.25
PRAME-204ENST00000403441 AFDNP55196 1824 aaKnown RBP16.63■□□□□ 0.25
PRAME-204ENST00000403441 WDR90Q96KV7 1748 aa16.62■□□□□ 0.25
PRAME-204ENST00000403441 DLEC1Q9Y238 1755 aa16.62■□□□□ 0.25
PRAME-204ENST00000403441 A0A087WZG4 1122 aa16.62■□□□□ 0.25
PRAME-204ENST00000403441 SERPINB2P05120 415 aa16.62■□□□□ 0.25
PRAME-204ENST00000403441 CANXP27824 592 aaKnown RBP16.62■□□□□ 0.25
PRAME-204ENST00000403441 TEFQ10587 303 aa16.62■□□□□ 0.25
PRAME-204ENST00000403441 NPC1L1Q9UHC9 1359 aa16.62■□□□□ 0.25
PRAME-204ENST00000403441 SBF1O95248 1867 aa16.61■□□□□ 0.25
PRAME-204ENST00000403441 U2SURPO15042 1029 aaKnown RBP16.61■□□□□ 0.25
PRAME-204ENST00000403441 GAS2L2Q8NHY3 880 aa16.61■□□□□ 0.25
PRAME-204ENST00000403441 BCL2L12Q9HB09 334 aa16.61■□□□□ 0.25
PRAME-204ENST00000403441 LMNB1P20700 586 aa16.6■□□□□ 0.25
PRAME-204ENST00000403441 RASSF7Q02833 373 aa16.6■□□□□ 0.25
PRAME-204ENST00000403441 C2CD5Q86YS7 1000 aa16.6■□□□□ 0.25
PRAME-204ENST00000403441 DNAJC5GQ8N7S2 189 aa16.6■□□□□ 0.25
PRAME-204ENST00000403441 TTLL6Q8N841 843 aa16.6■□□□□ 0.25
PRAME-204ENST00000403441 RRAGCQ9HB90 399 aa16.6■□□□□ 0.25
PRAME-204ENST00000403441 COL3A1P02461 1466 aaPredicted RBP16.6■□□□□ 0.25
PRAME-204ENST00000403441 GNAT3A8MTJ3 354 aa16.59■□□□□ 0.25
PRAME-204ENST00000403441 H0YIN7 160 aa16.59■□□□□ 0.25
PRAME-204ENST00000403441 EIF5P55010 431 aaKnown RBP16.59■□□□□ 0.25
PRAME-204ENST00000403441 TEX13AQ9BXU3 409 aaPredicted RBP16.59■□□□□ 0.25
PRAME-204ENST00000403441 SCN7AQ01118 1682 aa16.59■□□□□ 0.25
PRAME-204ENST00000403441 ZNF790Q6PG37 636 aa16.58■□□□□ 0.24
PRAME-204ENST00000403441 BICDL1Q6ZP65 573 aa16.58■□□□□ 0.24
PRAME-204ENST00000403441 NPM2Q86SE8 214 aaKnown RBP16.58■□□□□ 0.24
PRAME-204ENST00000403441 SMC1BQ8NDV3 1235 aa16.58■□□□□ 0.24
PRAME-204ENST00000403441 ZNF330Q9Y3S2 320 aaPredicted RBP16.58■□□□□ 0.24
PRAME-204ENST00000403441 CARMIL3Q8ND23 1372 aa16.58■□□□□ 0.24
PRAME-204ENST00000403441 HEG1Q9ULI3 1381 aa16.58■□□□□ 0.24
PRAME-204ENST00000403441 CNGB1Q14028 1251 aaPredicted RBP16.57■□□□□ 0.24
PRAME-204ENST00000403441 ZNF496Q96IT1 587 aaPredicted RBP16.57■□□□□ 0.24
PRAME-204ENST00000403441 TIAM2Q8IVF5 1701 aa16.56■□□□□ 0.24
PRAME-204ENST00000403441 PDZRN3Q9UPQ7 1066 aa16.56■□□□□ 0.24
PRAME-204ENST00000403441 PDE6BP35913 854 aa16.55■□□□□ 0.24
PRAME-204ENST00000403441 TBC1D9BQ66K14 1250 aa16.55■□□□□ 0.24
PRAME-204ENST00000403441 IL17REQ8NFR9 667 aa16.55■□□□□ 0.24
PRAME-204ENST00000403441 KLRG1Q96E93 195 aa16.55■□□□□ 0.24
PRAME-204ENST00000403441 FMNL2Q96PY5 1086 aa16.55■□□□□ 0.24
PRAME-204ENST00000403441 SIPA1L3O60292 1781 aaPredicted RBP16.55■□□□□ 0.24
PRAME-204ENST00000403441 GLTPD2A6NH11 291 aa16.54■□□□□ 0.24
PRAME-204ENST00000403441 NPHP1O15259 732 aa16.54■□□□□ 0.24
PRAME-204ENST00000403441 VEGFAP15692 232 aaPredicted RBP16.54■□□□□ 0.24
PRAME-204ENST00000403441 IL6STP40189 918 aaPredicted RBP16.54■□□□□ 0.24
PRAME-204ENST00000403441 HTRA3P83110 453 aa16.54■□□□□ 0.24
PRAME-204ENST00000403441 ZNF622Q969S3 477 aaKnown RBP eCLIP16.54■□□□□ 0.24
PRAME-204ENST00000403441 CFAP53Q96M91 514 aa16.54■□□□□ 0.24
PRAME-204ENST00000403441 BRIP1Q9BX63 1249 aa16.54■□□□□ 0.24
PRAME-204ENST00000403441 CEMIPQ8WUJ3 1361 aa16.53■□□□□ 0.24
PRAME-204ENST00000403441 NFKBIEO00221 500 aa16.53■□□□□ 0.24
PRAME-204ENST00000403441 TBC1D2BQ9UPU7 963 aa16.53■□□□□ 0.24
PRAME-204ENST00000403441 ANKRD31Q8N7Z5 1873 aa16.52■□□□□ 0.24
PRAME-204ENST00000403441 PRR5LQ6MZQ0 368 aa16.52■□□□□ 0.24
PRAME-204ENST00000403441 CNBD1Q8NA66 436 aa16.52■□□□□ 0.24
PRAME-204ENST00000403441 SETDB2Q96T68 719 aa16.52■□□□□ 0.24
PRAME-204ENST00000403441 COL11A2P13942 1736 aaPredicted RBP16.51■□□□□ 0.23
PRAME-204ENST00000403441 BTBD11A6QL63 1104 aa16.51■□□□□ 0.23
PRAME-204ENST00000403441 PRKAR2BP31323 418 aa16.51■□□□□ 0.23
PRAME-204ENST00000403441 PRELPP51888 382 aa16.51■□□□□ 0.23
PRAME-204ENST00000403441 JMYQ8N9B5 988 aa16.51■□□□□ 0.23
PRAME-204ENST00000403441 C21orf2O43822 256 aa16.5■□□□□ 0.23
PRAME-204ENST00000403441 A1BGP04217 495 aa16.5■□□□□ 0.23
PRAME-204ENST00000403441 ST5P78524 1137 aa16.5■□□□□ 0.23
PRAME-204ENST00000403441 DPY19L2Q6NUT2 758 aa16.5■□□□□ 0.23
PRAME-204ENST00000403441 ZNF219Q9P2Y4 722 aaPredicted RBP16.5■□□□□ 0.23
PRAME-204ENST00000403441 NUDCQ9Y266 331 aa16.5■□□□□ 0.23
PRAME-204ENST00000403441 CAMTA2O94983 1202 aa16.49■□□□□ 0.23
PRAME-204ENST00000403441 CCDC88AQ3V6T2 1871 aa16.49■□□□□ 0.23
PRAME-204ENST00000403441 ERFEQ4G0M1 354 aa16.49■□□□□ 0.23
PRAME-204ENST00000403441 DZIP3Q86Y13 1208 aaKnown RBP16.49■□□□□ 0.23
PRAME-204ENST00000403441 RSPH6AQ9H0K4 717 aa16.49■□□□□ 0.23
PRAME-204ENST00000403441 BCORQ6W2J9 1755 aa16.49■□□□□ 0.23
PRAME-204ENST00000403441 SOGA3Q5TF21 947 aa16.48■□□□□ 0.23
PRAME-204ENST00000403441 STYK1Q6J9G0 422 aa16.48■□□□□ 0.23
PRAME-204ENST00000403441 CCDC24Q8N4L8 307 aa16.48■□□□□ 0.23
PRAME-204ENST00000403441 RTF1Q92541 710 aaKnown RBP16.48■□□□□ 0.23
PRAME-204ENST00000403441 CNKSR1Q969H4 720 aa16.48■□□□□ 0.23
PRAME-204ENST00000403441 PHACTR3Q96KR7 559 aa16.48■□□□□ 0.23
PRAME-204ENST00000403441 TAOK3Q9H2K8 898 aa16.48■□□□□ 0.23
PRAME-204ENST00000403441 LTBP3Q9NS15 1303 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms