RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 KDRP35968 1356 aa13.87□□□□□ -0.19
RCC1-204ENST00000398958 MAP3K5Q99683 1374 aa13.87□□□□□ -0.19
RCC1-204ENST00000398958 LARP1Q6PKG0 1096 aaKnown RBP13.86□□□□□ -0.19
RCC1-204ENST00000398958 RGPD2P0DJD1 1756 aa13.86□□□□□ -0.19
RCC1-204ENST00000398958 PI4KAP2A4QPH2 592 aa13.86□□□□□ -0.19
RCC1-204ENST00000398958 MAP4K4O95819 1239 aaPredicted RBP13.86□□□□□ -0.19
RCC1-204ENST00000398958 ZSCAN30Q86W11 494 aa13.86□□□□□ -0.19
RCC1-204ENST00000398958 PI4KAP1Q8N8J0 262 aa13.86□□□□□ -0.19
RCC1-204ENST00000398958 KIF2CQ99661 725 aa13.86□□□□□ -0.19
RCC1-204ENST00000398958 CWF19L2Q2TBE0 894 aaKnown RBP13.85□□□□□ -0.19
RCC1-204ENST00000398958 ERBB3P21860 1342 aa13.85□□□□□ -0.19
RCC1-204ENST00000398958 MSNP26038 577 aaKnown RBP13.85□□□□□ -0.19
RCC1-204ENST00000398958 PPP1R9BQ96SB3 815 aa13.85□□□□□ -0.19
RCC1-204ENST00000398958 IL1RAPL2Q9NP60 686 aa13.85□□□□□ -0.19
RCC1-204ENST00000398958 LRRFIP2Q9Y608 721 aaKnown RBP13.85□□□□□ -0.19
RCC1-204ENST00000398958 PTPRCP08575 1304 aa13.85□□□□□ -0.19
RCC1-204ENST00000398958 NPHP3Q7Z494 1330 aa13.85□□□□□ -0.19
RCC1-204ENST00000398958 PXDNQ92626 1479 aa13.85□□□□□ -0.19
RCC1-204ENST00000398958 SDSP20132 328 aa13.84□□□□□ -0.19
RCC1-204ENST00000398958 GOLGA6L22H0YM25 854 aa13.84□□□□□ -0.19
RCC1-204ENST00000398958 RNMTO43148 476 aaKnown RBP13.84□□□□□ -0.19
RCC1-204ENST00000398958 SSFA2P28290 1259 aa13.84□□□□□ -0.19
RCC1-204ENST00000398958 TTC22Q5TAA0 569 aa13.84□□□□□ -0.19
RCC1-204ENST00000398958 MARF1Q9Y4F3 1742 aaKnown RBP13.84□□□□□ -0.19
RCC1-204ENST00000398958 CCDC30Q5VVM6 783 aa13.84□□□□□ -0.19
RCC1-204ENST00000398958 DDX49Q9Y6V7 483 aaKnown RBP13.84□□□□□ -0.19
RCC1-204ENST00000398958 CDC45O75419 566 aa13.83□□□□□ -0.2
RCC1-204ENST00000398958 OFD1O75665 1012 aa13.83□□□□□ -0.2
RCC1-204ENST00000398958 RBM10P98175 930 aaKnown RBP13.83□□□□□ -0.2
RCC1-204ENST00000398958 TATP17735 454 aaPredicted RBP13.83□□□□□ -0.2
RCC1-204ENST00000398958 AEBP2Q6ZN18 517 aaPredicted RBP13.83□□□□□ -0.2
RCC1-204ENST00000398958 RPAP2Q8IXW5 612 aaPredicted RBP13.83□□□□□ -0.2
RCC1-204ENST00000398958 K7ELQ4 463 aaPredicted RBP13.82□□□□□ -0.2
RCC1-204ENST00000398958 CYP27B1O15528 508 aa13.82□□□□□ -0.2
RCC1-204ENST00000398958 BTG4Q9NY30 223 aa13.82□□□□□ -0.2
RCC1-204ENST00000398958 GNAI2P04899 355 aa13.82□□□□□ -0.2
RCC1-204ENST00000398958 NBPF7P0C2Y1 421 aaPredicted RBP13.82□□□□□ -0.2
RCC1-204ENST00000398958 EIF4A1P60842 406 aaKnown RBP13.82□□□□□ -0.2
RCC1-204ENST00000398958 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.82□□□□□ -0.2
RCC1-204ENST00000398958 USP16Q9Y5T5 823 aa13.82□□□□□ -0.2
RCC1-204ENST00000398958 ATP5J2-PTCD1G3V325 749 aa13.81□□□□□ -0.2
RCC1-204ENST00000398958 CCDC85AQ96PX6 553 aaPredicted RBP13.81□□□□□ -0.2
RCC1-204ENST00000398958 CCT4P50991 539 aaKnown RBP13.8□□□□□ -0.2
RCC1-204ENST00000398958 AKAP4Q5JQC9 854 aa13.8□□□□□ -0.2
RCC1-204ENST00000398958 KLHDC4Q8TBB5 520 aa13.8□□□□□ -0.2
RCC1-204ENST00000398958 RILPL2Q969X0 211 aa13.8□□□□□ -0.2
RCC1-204ENST00000398958 LTN1O94822 1766 aa13.8□□□□□ -0.2
RCC1-204ENST00000398958 NCLP19338 710 aaKnown RBP13.8□□□□□ -0.2
RCC1-204ENST00000398958 KLHL40Q2TBA0 621 aa13.8□□□□□ -0.2
RCC1-204ENST00000398958 FAM182BQ5T319 152 aa13.8□□□□□ -0.2
RCC1-204ENST00000398958 NOL8Q76FK4 1167 aaKnown RBP13.8□□□□□ -0.2
RCC1-204ENST00000398958 NUTM1Q86Y26 1132 aa13.8□□□□□ -0.2
RCC1-204ENST00000398958 ZNF496Q96IT1 587 aaPredicted RBP13.8□□□□□ -0.2
RCC1-204ENST00000398958 SIL1Q9H173 461 aa13.8□□□□□ -0.2
RCC1-204ENST00000398958 SPATA31A3Q5VYP0 1347 aa13.8□□□□□ -0.2
RCC1-204ENST00000398958 DTNBO60941 627 aa13.79□□□□□ -0.2
RCC1-204ENST00000398958 BAG4O95429 457 aaKnown RBP13.79□□□□□ -0.2
RCC1-204ENST00000398958 USP44Q9H0E7 712 aa13.79□□□□□ -0.2
RCC1-204ENST00000398958 R3HCC1Q9Y3T6 440 aaKnown RBP13.79□□□□□ -0.2
RCC1-204ENST00000398958 TRIM6-TRIM34B2RNG4 842 aa13.79□□□□□ -0.2
RCC1-204ENST00000398958 KCNQ4P56696 695 aa13.78□□□□□ -0.2
RCC1-204ENST00000398958 FAM13BQ9NYF5 915 aa13.78□□□□□ -0.2
RCC1-204ENST00000398958 MAP3K2Q9Y2U5 619 aa13.78□□□□□ -0.2
RCC1-204ENST00000398958 RGPD5Q99666 1765 aa13.78□□□□□ -0.2
RCC1-204ENST00000398958 CABP4P57796 275 aa13.78□□□□□ -0.2
RCC1-204ENST00000398958 PA2G4Q9UQ80 394 aaKnown RBP13.78□□□□□ -0.2
RCC1-204ENST00000398958 HMMRO75330 724 aa13.77□□□□□ -0.2
RCC1-204ENST00000398958 PDE1AP54750 535 aa13.77□□□□□ -0.2
RCC1-204ENST00000398958 UNC5CLQ8IV45 518 aa13.77□□□□□ -0.2
RCC1-204ENST00000398958 AK9Q5TCS8 1911 aa13.77□□□□□ -0.2
RCC1-204ENST00000398958 UBTFL1P0CB47 393 aaPredicted RBP13.77□□□□□ -0.21
RCC1-204ENST00000398958 ACSBG1Q96GR2 724 aa13.77□□□□□ -0.21
RCC1-204ENST00000398958 MCTP1Q6DN14 999 aa13.77□□□□□ -0.21
RCC1-204ENST00000398958 SMIM5Q71RC9 77 aa13.77□□□□□ -0.21
RCC1-204ENST00000398958 TTC5Q8N0Z6 440 aa13.77□□□□□ -0.21
RCC1-204ENST00000398958 DCCP43146 1447 aa13.76□□□□□ -0.21
RCC1-204ENST00000398958 FAM177BA6PVY3 158 aa13.76□□□□□ -0.21
RCC1-204ENST00000398958 PHKG2P15735 406 aa13.76□□□□□ -0.21
RCC1-204ENST00000398958 CAVIN1Q6NZI2 390 aaKnown RBP13.76□□□□□ -0.21
RCC1-204ENST00000398958 TRPM3Q9HCF6 1732 aaPredicted RBP13.76□□□□□ -0.21
RCC1-204ENST00000398958 IBTKQ9P2D0 1353 aaPredicted RBP13.76□□□□□ -0.21
RCC1-204ENST00000398958 TERF1P54274 439 aa13.76□□□□□ -0.21
RCC1-204ENST00000398958 FOXD4L5Q5VV16 416 aaPredicted RBP13.76□□□□□ -0.21
RCC1-204ENST00000398958 PPP1R42Q7Z4L9 355 aa13.76□□□□□ -0.21
RCC1-204ENST00000398958 FOXD4L4Q8WXT5 416 aaPredicted RBP13.76□□□□□ -0.21
RCC1-204ENST00000398958 CHAMP1Q96JM3 812 aa13.76□□□□□ -0.21
RCC1-204ENST00000398958 HTATSF1O43719 755 aaKnown RBP13.75□□□□□ -0.21
RCC1-204ENST00000398958 SURF6O75683 361 aaKnown RBP13.75□□□□□ -0.21
RCC1-204ENST00000398958 A1BGP04217 495 aa13.75□□□□□ -0.21
RCC1-204ENST00000398958 OS9Q13438 667 aaPredicted RBP13.75□□□□□ -0.21
RCC1-204ENST00000398958 ZNF790Q6PG37 636 aa13.75□□□□□ -0.21
RCC1-204ENST00000398958 USP26Q9BXU7 913 aa13.75□□□□□ -0.21
RCC1-204ENST00000398958 LRRCC1Q9C099 1032 aa13.75□□□□□ -0.21
RCC1-204ENST00000398958 C9orf78Q9NZ63 289 aaPredicted RBP13.75□□□□□ -0.21
RCC1-204ENST00000398958 CHMP3Q9Y3E7 222 aa13.75□□□□□ -0.21
RCC1-204ENST00000398958 NFAT5O94916 1531 aa13.75□□□□□ -0.21
RCC1-204ENST00000398958 KIF24Q5T7B8 1368 aa13.75□□□□□ -0.21
RCC1-204ENST00000398958 GIGYF1O75420 1035 aaPredicted RBP13.75□□□□□ -0.21
RCC1-204ENST00000398958 CLEC17AQ6ZS10 378 aa13.75□□□□□ -0.21
RCC1-204ENST00000398958 COPS6Q7L5N1 327 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms