RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.81■□□□□ 0.28
PCDHA11-201ENST00000398640 SETDB2Q96T68 719 aa16.81■□□□□ 0.28
PCDHA11-201ENST00000398640 SRGAP3O43295 1099 aa16.81■□□□□ 0.28
PCDHA11-201ENST00000398640 PCDH11XQ9BZA7 1347 aa16.81■□□□□ 0.28
PCDHA11-201ENST00000398640 PCDH11YQ9BZA8 1340 aa16.81■□□□□ 0.28
PCDHA11-201ENST00000398640 IFIT1P09914 478 aaKnown RBP16.81■□□□□ 0.28
PCDHA11-201ENST00000398640 SMARCE1Q969G3 411 aa16.81■□□□□ 0.28
PCDHA11-201ENST00000398640 UBAC1Q9BSL1 405 aa16.81■□□□□ 0.28
PCDHA11-201ENST00000398640 HECW2Q9P2P5 1572 aa16.81■□□□□ 0.28
PCDHA11-201ENST00000398640 POLR3DP05423 398 aaPredicted RBP16.81■□□□□ 0.28
PCDHA11-201ENST00000398640 DBF4Q9UBU7 674 aaPredicted RBP16.81■□□□□ 0.28
PCDHA11-201ENST00000398640 UGGT1Q9NYU2 1555 aa16.8■□□□□ 0.28
PCDHA11-201ENST00000398640 ZNF772Q68DY9 489 aaPredicted RBP16.8■□□□□ 0.28
PCDHA11-201ENST00000398640 DDX17Q92841 729 aaKnown RBP16.8■□□□□ 0.28
PCDHA11-201ENST00000398640 GCC1Q96CN9 775 aa16.8■□□□□ 0.28
PCDHA11-201ENST00000398640 LTKP29376 864 aa16.8■□□□□ 0.28
PCDHA11-201ENST00000398640 IFIT5Q13325 482 aaKnown RBP16.8■□□□□ 0.28
PCDHA11-201ENST00000398640 CCDC39Q9UFE4 941 aa16.8■□□□□ 0.28
PCDHA11-201ENST00000398640 ERCC6L2Q5T890 1561 aa16.8■□□□□ 0.28
PCDHA11-201ENST00000398640 ABCC11Q96J66 1382 aa16.8■□□□□ 0.28
PCDHA11-201ENST00000398640 SPDYE4A6NLX3 237 aa16.79■□□□□ 0.28
PCDHA11-201ENST00000398640 RDXP35241 583 aaKnown RBP16.79■□□□□ 0.28
PCDHA11-201ENST00000398640 TSPY26PQ9H489 355 aa16.79■□□□□ 0.28
PCDHA11-201ENST00000398640 ANKRD18BA2A2Z9 1011 aa16.79■□□□□ 0.28
PCDHA11-201ENST00000398640 AKAP2Q9Y2D5 859 aa16.79■□□□□ 0.28
PCDHA11-201ENST00000398640 PRAG1Q86YV5 1406 aa16.79■□□□□ 0.28
PCDHA11-201ENST00000398640 PDCP20941 246 aa16.79■□□□□ 0.28
PCDHA11-201ENST00000398640 WWC3Q9ULE0 1092 aa16.79■□□□□ 0.28
PCDHA11-201ENST00000398640 SERPINC1P01008 464 aa16.78■□□□□ 0.28
PCDHA11-201ENST00000398640 ME1P48163 572 aa16.78■□□□□ 0.28
PCDHA11-201ENST00000398640 AKAP4Q5JQC9 854 aa16.78■□□□□ 0.28
PCDHA11-201ENST00000398640 FLT4P35916 1363 aa16.78■□□□□ 0.28
PCDHA11-201ENST00000398640 CDC5LQ99459 802 aaKnown RBP16.78■□□□□ 0.28
PCDHA11-201ENST00000398640 IL1RAPL2Q9NP60 686 aa16.78■□□□□ 0.28
PCDHA11-201ENST00000398640 TMEM94Q12767 1356 aa16.78■□□□□ 0.28
PCDHA11-201ENST00000398640 TRAK2O60296 914 aa16.78■□□□□ 0.28
PCDHA11-201ENST00000398640 CWC27Q6UX04 472 aaKnown RBP16.78■□□□□ 0.28
PCDHA11-201ENST00000398640 AIDAQ96BJ3 306 aa16.77■□□□□ 0.28
PCDHA11-201ENST00000398640 LETM1O95202 739 aaPredicted RBP16.77■□□□□ 0.28
PCDHA11-201ENST00000398640 ADGRL2O95490 1459 aa16.77■□□□□ 0.28
PCDHA11-201ENST00000398640 PPM1FP49593 454 aaPredicted RBP16.77■□□□□ 0.28
PCDHA11-201ENST00000398640 ARHGEF5Q12774 1597 aa16.77■□□□□ 0.27
PCDHA11-201ENST00000398640 RABEP1Q15276 862 aa16.77■□□□□ 0.27
PCDHA11-201ENST00000398640 FBLN1P23142 703 aa16.76■□□□□ 0.27
PCDHA11-201ENST00000398640 DZIP1Q86YF9 867 aaKnown RBP16.76■□□□□ 0.27
PCDHA11-201ENST00000398640 SEPT11Q9NVA2 429 aaKnown RBP16.76■□□□□ 0.27
PCDHA11-201ENST00000398640 EFCAB6Q5THR3 1501 aa16.76■□□□□ 0.27
PCDHA11-201ENST00000398640 ZRANB1Q9UGI0 708 aa16.76■□□□□ 0.27
PCDHA11-201ENST00000398640 SLC5A1P13866 664 aa16.76■□□□□ 0.27
PCDHA11-201ENST00000398640 RIMBP3CA6NJZ7 1639 aa16.76■□□□□ 0.27
PCDHA11-201ENST00000398640 RIMBP3BA6NNM3 1639 aa16.76■□□□□ 0.27
PCDHA11-201ENST00000398640 RIMBP3Q9UFD9 1639 aa16.76■□□□□ 0.27
PCDHA11-201ENST00000398640 APBA3O96018 575 aa16.76■□□□□ 0.27
PCDHA11-201ENST00000398640 MYO6Q9UM54 1294 aa16.76■□□□□ 0.27
PCDHA11-201ENST00000398640 TTC37Q6PGP7 1564 aa16.76■□□□□ 0.27
PCDHA11-201ENST00000398640 SAMD9LQ8IVG5 1584 aa16.76■□□□□ 0.27
PCDHA11-201ENST00000398640 MLH3Q9UHC1 1453 aa16.76■□□□□ 0.27
PCDHA11-201ENST00000398640 IP6K1Q92551 441 aa16.76■□□□□ 0.27
PCDHA11-201ENST00000398640 MINDY4BA8MYZ0 360 aa16.75■□□□□ 0.27
PCDHA11-201ENST00000398640 DEF6Q9H4E7 631 aa16.75■□□□□ 0.27
PCDHA11-201ENST00000398640 RALGAPBQ86X10 1494 aa16.75■□□□□ 0.27
PCDHA11-201ENST00000398640 CWC25Q9NXE8 425 aaPredicted RBP16.75■□□□□ 0.27
PCDHA11-201ENST00000398640 ATF7IPQ6VMQ6 1270 aa16.75■□□□□ 0.27
PCDHA11-201ENST00000398640 RXRBP28702 533 aa16.74■□□□□ 0.27
PCDHA11-201ENST00000398640 MCM2P49736 904 aa16.74■□□□□ 0.27
PCDHA11-201ENST00000398640 SLF2Q8IX21 1173 aa16.74■□□□□ 0.27
PCDHA11-201ENST00000398640 SIRT1Q96EB6 747 aa16.74■□□□□ 0.27
PCDHA11-201ENST00000398640 CCNL1Q9UK58 526 aaPredicted RBP16.74■□□□□ 0.27
PCDHA11-201ENST00000398640 TMEM87AQ8NBN3 555 aa16.74■□□□□ 0.27
PCDHA11-201ENST00000398640 PUS7Q96PZ0 661 aaKnown RBP16.74■□□□□ 0.27
PCDHA11-201ENST00000398640 QTRT2Q9H974 415 aaKnown RBP16.74■□□□□ 0.27
PCDHA11-201ENST00000398640 MAGI3Q5TCQ9 1506 aa16.74■□□□□ 0.27
PCDHA11-201ENST00000398640 C11orf95C9JLR9 678 aaPredicted RBP16.74■□□□□ 0.27
PCDHA11-201ENST00000398640 NYXQ9GZU5 481 aa16.74■□□□□ 0.27
PCDHA11-201ENST00000398640 ZNHIT6Q9NWK9 470 aaKnown RBP16.74■□□□□ 0.27
PCDHA11-201ENST00000398640 NEFHP12036 1026 aa16.74■□□□□ 0.27
PCDHA11-201ENST00000398640 JMYQ8N9B5 988 aa16.74■□□□□ 0.27
PCDHA11-201ENST00000398640 DNAAF4Q8WXU2 420 aa16.74■□□□□ 0.27
PCDHA11-201ENST00000398640 MKNK2Q9HBH9 465 aa16.74■□□□□ 0.27
PCDHA11-201ENST00000398640 TRPC5Q9UL62 973 aaPredicted RBP16.74■□□□□ 0.27
PCDHA11-201ENST00000398640 CLEC11AQ9Y240 323 aa16.74■□□□□ 0.27
PCDHA11-201ENST00000398640 NLRP1Q9C000 1473 aa16.74■□□□□ 0.27
PCDHA11-201ENST00000398640 HOXC9P31274 260 aa16.73■□□□□ 0.27
PCDHA11-201ENST00000398640 NUTM1Q86Y26 1132 aa16.73■□□□□ 0.27
PCDHA11-201ENST00000398640 PLEKHG1Q9ULL1 1385 aa16.73■□□□□ 0.27
PCDHA11-201ENST00000398640 CCDC184Q52MB2 194 aa16.73■□□□□ 0.27
PCDHA11-201ENST00000398640 NEBLO76041 1014 aa16.73■□□□□ 0.27
PCDHA11-201ENST00000398640 TRAPPC3LQ5T215 181 aa16.73■□□□□ 0.27
PCDHA11-201ENST00000398640 ANKRD1Q15327 319 aa16.73■□□□□ 0.27
PCDHA11-201ENST00000398640 TNMDQ9H2S6 317 aa16.73■□□□□ 0.27
PCDHA11-201ENST00000398640 ADGBQ8N7X0 1667 aa16.73■□□□□ 0.27
PCDHA11-201ENST00000398640 LARP1BQ659C4 914 aaKnown RBP16.73■□□□□ 0.27
PCDHA11-201ENST00000398640 JAKMIP1Q96N16 626 aaKnown RBP16.73■□□□□ 0.27
PCDHA11-201ENST00000398640 NOL7Q9UMY1 257 aaKnown RBP16.73■□□□□ 0.27
PCDHA11-201ENST00000398640 MRE11P49959 708 aa16.72■□□□□ 0.27
PCDHA11-201ENST00000398640 STIM1Q13586 685 aa16.72■□□□□ 0.27
PCDHA11-201ENST00000398640 EIF4A2Q14240 407 aaKnown RBP16.72■□□□□ 0.27
PCDHA11-201ENST00000398640 SLC4A8Q2Y0W8 1093 aa16.72■□□□□ 0.27
PCDHA11-201ENST00000398640 CCDC96Q2M329 555 aa16.72■□□□□ 0.27
PCDHA11-201ENST00000398640 FAM177A1Q8N128 213 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms