RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 PDCL3Q9H2J4 239 aa13.62□□□□□ -0.23
PCDHGA8-201ENST00000398604 LRRFIP2Q9Y608 721 aaKnown RBP13.62□□□□□ -0.23
PCDHGA8-201ENST00000398604 EXOC5O00471 708 aa13.62□□□□□ -0.23
PCDHGA8-201ENST00000398604 CT47B1P0C2W7 299 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA8-201ENST00000398604 CASTP20810 708 aaKnown RBP13.62□□□□□ -0.23
PCDHGA8-201ENST00000398604 HSP90AB2PQ58FF8 381 aa13.62□□□□□ -0.23
PCDHGA8-201ENST00000398604 JMYQ8N9B5 988 aa13.62□□□□□ -0.23
PCDHGA8-201ENST00000398604 TMEM2Q9UHN6 1383 aa13.62□□□□□ -0.23
PCDHGA8-201ENST00000398604 MPHOSPH10O00566 681 aaKnown RBP13.62□□□□□ -0.23
PCDHGA8-201ENST00000398604 DHX8Q14562 1220 aaKnown RBP13.62□□□□□ -0.23
PCDHGA8-201ENST00000398604 PRPF40BQ6NWY9 871 aaKnown RBP13.62□□□□□ -0.23
PCDHGA8-201ENST00000398604 ZNF771Q7L3S4 317 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA8-201ENST00000398604 VSIG10Q8N0Z9 540 aa13.62□□□□□ -0.23
PCDHGA8-201ENST00000398604 CAGE1Q8TC20 777 aa13.62□□□□□ -0.23
PCDHGA8-201ENST00000398604 KIF1BPQ96EK5 621 aa13.62□□□□□ -0.23
PCDHGA8-201ENST00000398604 ZSCAN25Q6NSZ9 544 aa13.61□□□□□ -0.23
PCDHGA8-201ENST00000398604 PARD3Q8TEW0 1356 aa13.61□□□□□ -0.23
PCDHGA8-201ENST00000398604 IFIT1P09914 478 aaKnown RBP13.61□□□□□ -0.23
PCDHGA8-201ENST00000398604 GUCY1B3Q02153 619 aa13.61□□□□□ -0.23
PCDHGA8-201ENST00000398604 TSHZ3Q63HK5 1081 aa13.61□□□□□ -0.23
PCDHGA8-201ENST00000398604 TANGO6Q9C0B7 1094 aa13.61□□□□□ -0.23
PCDHGA8-201ENST00000398604 IFIT5Q13325 482 aaKnown RBP13.61□□□□□ -0.23
PCDHGA8-201ENST00000398604 FILIP1LQ4L180 1135 aa13.61□□□□□ -0.23
PCDHGA8-201ENST00000398604 TNMDQ9H2S6 317 aa13.61□□□□□ -0.23
PCDHGA8-201ENST00000398604 SIRT1Q96EB6 747 aa13.6□□□□□ -0.23
PCDHGA8-201ENST00000398604 MAGEC2Q9UBF1 373 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA8-201ENST00000398604 CTNNA3Q9UI47 895 aa13.6□□□□□ -0.23
PCDHGA8-201ENST00000398604 MX1P20591 662 aa13.6□□□□□ -0.23
PCDHGA8-201ENST00000398604 ANKRD1Q15327 319 aa13.6□□□□□ -0.23
PCDHGA8-201ENST00000398604 FILIP1Q7Z7B0 1213 aa13.6□□□□□ -0.23
PCDHGA8-201ENST00000398604 C19orf44Q9H6X5 657 aa13.6□□□□□ -0.23
PCDHGA8-201ENST00000398604 IGHDP01880 384 aa13.6□□□□□ -0.23
PCDHGA8-201ENST00000398604 SLC4A8Q2Y0W8 1093 aa13.6□□□□□ -0.23
PCDHGA8-201ENST00000398604 CCDC83Q8IWF9 413 aa13.6□□□□□ -0.23
PCDHGA8-201ENST00000398604 RUFY1Q96T51 708 aa13.6□□□□□ -0.23
PCDHGA8-201ENST00000398604 TSPY26PQ9H489 355 aa13.6□□□□□ -0.23
PCDHGA8-201ENST00000398604 TTC21AQ8NDW8 1320 aa13.6□□□□□ -0.23
PCDHGA8-201ENST00000398604 ARHGAP31Q2M1Z3 1444 aa13.6□□□□□ -0.23
PCDHGA8-201ENST00000398604 WDR33Q9C0J8 1336 aaKnown RBP13.6□□□□□ -0.23
PCDHGA8-201ENST00000398604 C6orf229H3BNL8 230 aa13.59□□□□□ -0.23
PCDHGA8-201ENST00000398604 UBE3BQ7Z3V4 1068 aa13.59□□□□□ -0.23
PCDHGA8-201ENST00000398604 DNAAF4Q8WXU2 420 aa13.59□□□□□ -0.23
PCDHGA8-201ENST00000398604 GLI2P10070 1586 aa13.59□□□□□ -0.23
PCDHGA8-201ENST00000398604 KCNA6P17658 529 aa13.59□□□□□ -0.23
PCDHGA8-201ENST00000398604 PIP4K2AP48426 406 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA8-201ENST00000398604 WDR78Q5VTH9 848 aa13.59□□□□□ -0.23
PCDHGA8-201ENST00000398604 MKNK2Q9HBH9 465 aa13.59□□□□□ -0.23
PCDHGA8-201ENST00000398604 NLRP1Q9C000 1473 aa13.59□□□□□ -0.23
PCDHGA8-201ENST00000398604 TOM1O60784 492 aa13.59□□□□□ -0.23
PCDHGA8-201ENST00000398604 POLR3DP05423 398 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA8-201ENST00000398604 HMGB2P26583 209 aaKnown RBP13.59□□□□□ -0.23
PCDHGA8-201ENST00000398604 SPATA32Q96LK8 384 aa13.59□□□□□ -0.23
PCDHGA8-201ENST00000398604 PI4KAP2A4QPH2 592 aa13.59□□□□□ -0.23
PCDHGA8-201ENST00000398604 GLRX3O76003 335 aaKnown RBP13.59□□□□□ -0.23
PCDHGA8-201ENST00000398604 PI4KAP1Q8N8J0 262 aa13.59□□□□□ -0.23
PCDHGA8-201ENST00000398604 YTHDC2Q9H6S0 1430 aaKnown RBP13.58□□□□□ -0.23
PCDHGA8-201ENST00000398604 RANBP6O60518 1105 aaKnown RBP13.58□□□□□ -0.24
PCDHGA8-201ENST00000398604 ZNF76P36508 570 aa13.58□□□□□ -0.24
PCDHGA8-201ENST00000398604 FLIIQ13045 1269 aa13.58□□□□□ -0.24
PCDHGA8-201ENST00000398604 NAPBQ9H115 298 aa13.58□□□□□ -0.24
PCDHGA8-201ENST00000398604 TMOD2Q9NZR1 351 aa13.58□□□□□ -0.24
PCDHGA8-201ENST00000398604 IMMTQ16891 758 aaKnown RBP13.57□□□□□ -0.24
PCDHGA8-201ENST00000398604 CAVIN4Q5BKX8 364 aa13.57□□□□□ -0.24
PCDHGA8-201ENST00000398604 LDHAL6AQ6ZMR3 332 aa13.57□□□□□ -0.24
PCDHGA8-201ENST00000398604 CRACR2BQ8N4Y2 399 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA8-201ENST00000398604 CABLES1Q8TDN4 633 aa13.57□□□□□ -0.24
PCDHGA8-201ENST00000398604 AMOTQ4VCS5 1084 aa13.57□□□□□ -0.24
PCDHGA8-201ENST00000398604 DBF4Q9UBU7 674 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA8-201ENST00000398604 ZNF652Q9Y2D9 606 aa13.57□□□□□ -0.24
PCDHGA8-201ENST00000398604 NPHP3Q7Z494 1330 aa13.57□□□□□ -0.24
PCDHGA8-201ENST00000398604 SLC39A6Q13433 755 aa13.57□□□□□ -0.24
PCDHGA8-201ENST00000398604 COL17A1Q9UMD9 1497 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA8-201ENST00000398604 ACEP12821 1306 aa13.57□□□□□ -0.24
PCDHGA8-201ENST00000398604 NCKAP5LQ9HCH0 1330 aa13.57□□□□□ -0.24
PCDHGA8-201ENST00000398604 TRIM27P14373 513 aa13.57□□□□□ -0.24
PCDHGA8-201ENST00000398604 CCDC173Q0VFZ6 552 aa13.57□□□□□ -0.24
PCDHGA8-201ENST00000398604 CCDC192P0DO97 292 aa13.56□□□□□ -0.24
PCDHGA8-201ENST00000398604 SYCP1Q15431 976 aa13.56□□□□□ -0.24
PCDHGA8-201ENST00000398604 CAMK4Q16566 473 aa13.56□□□□□ -0.24
PCDHGA8-201ENST00000398604 HSP90B2PQ58FF3 399 aa13.56□□□□□ -0.24
PCDHGA8-201ENST00000398604 DZIP1Q86YF9 867 aaKnown RBP13.56□□□□□ -0.24
PCDHGA8-201ENST00000398604 RAB11FIP4Q86YS3 637 aa13.56□□□□□ -0.24
PCDHGA8-201ENST00000398604 IQSEC3Q9UPP2 1182 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA8-201ENST00000398604 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA8-201ENST00000398604 NKTRP30414 1462 aaKnown RBP13.56□□□□□ -0.24
PCDHGA8-201ENST00000398604 MYCNP04198 464 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA8-201ENST00000398604 PTPRTO14522 1441 aa13.55□□□□□ -0.24
PCDHGA8-201ENST00000398604 RAB11FIP3O75154 756 aa13.55□□□□□ -0.24
PCDHGA8-201ENST00000398604 NOM1Q5C9Z4 860 aaKnown RBP13.55□□□□□ -0.24
PCDHGA8-201ENST00000398604 WWC2Q6AWC2 1192 aa13.55□□□□□ -0.24
PCDHGA8-201ENST00000398604 ACSBG1Q96GR2 724 aa13.55□□□□□ -0.24
PCDHGA8-201ENST00000398604 MCM4P33991 863 aa13.55□□□□□ -0.24
PCDHGA8-201ENST00000398604 TRPM2O94759 1503 aa13.55□□□□□ -0.24
PCDHGA8-201ENST00000398604 HAND2P61296 217 aa13.55□□□□□ -0.24
PCDHGA8-201ENST00000398604 AEBP1Q8IUX7 1158 aa13.55□□□□□ -0.24
PCDHGA8-201ENST00000398604 NOL7Q9UMY1 257 aaKnown RBP13.55□□□□□ -0.24
PCDHGA8-201ENST00000398604 ANKRD36BQ8N2N9 1353 aa13.55□□□□□ -0.24
PCDHGA8-201ENST00000398604 HSPA2P54652 639 aa13.54□□□□□ -0.24
PCDHGA8-201ENST00000398604 DEF6Q9H4E7 631 aa13.54□□□□□ -0.24
PCDHGA8-201ENST00000398604 CCDC39Q9UFE4 941 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms