RNA–Protein interactions for RNA: ENST00000398594.3

PCDHGB7-201, Transcript of protocadherin gamma subfamily B, 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB7, Length 4,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB7-201ENST00000398594 C8orf58Q8NAV2 365 aa16.97■□□□□ 0.31
PCDHGB7-201ENST00000398594 RALGAPBQ86X10 1494 aa16.97■□□□□ 0.31
PCDHGB7-201ENST00000398594 IL16Q14005 1332 aa16.97■□□□□ 0.31
PCDHGB7-201ENST00000398594 SMARCC1Q92922 1105 aaPredicted RBP16.97■□□□□ 0.31
PCDHGB7-201ENST00000398594 CTTNBP2Q8WZ74 1663 aa16.97■□□□□ 0.31
PCDHGB7-201ENST00000398594 ATP10AO60312 1499 aa16.97■□□□□ 0.31
PCDHGB7-201ENST00000398594 ECHDC1Q9NTX5 307 aa16.97■□□□□ 0.31
PCDHGB7-201ENST00000398594 GOLIM4O00461 696 aa16.96■□□□□ 0.31
PCDHGB7-201ENST00000398594 TRAK2O60296 914 aa16.96■□□□□ 0.31
PCDHGB7-201ENST00000398594 RANBP6O60518 1105 aaKnown RBP16.96■□□□□ 0.31
PCDHGB7-201ENST00000398594 CCDC82Q8N4S0 544 aa16.96■□□□□ 0.31
PCDHGB7-201ENST00000398594 ZNF287Q9HBT7 754 aa16.96■□□□□ 0.31
PCDHGB7-201ENST00000398594 YTHDC2Q9H6S0 1430 aaKnown RBP16.96■□□□□ 0.31
PCDHGB7-201ENST00000398594 SETDB2Q96T68 719 aa16.96■□□□□ 0.31
PCDHGB7-201ENST00000398594 WDR33Q9C0J8 1336 aaKnown RBP16.96■□□□□ 0.31
PCDHGB7-201ENST00000398594 NAP1L1P55209 391 aaKnown RBP16.96■□□□□ 0.3
PCDHGB7-201ENST00000398594 KRT85P78386 507 aa16.96■□□□□ 0.3
PCDHGB7-201ENST00000398594 MEIS3Q99687 375 aa16.96■□□□□ 0.3
PCDHGB7-201ENST00000398594 WWC3Q9ULE0 1092 aa16.96■□□□□ 0.3
PCDHGB7-201ENST00000398594 SSBP05455 408 aaKnown RBP eCLIP16.95■□□□□ 0.3
PCDHGB7-201ENST00000398594 PDILTQ8N807 584 aa16.95■□□□□ 0.3
PCDHGB7-201ENST00000398594 PHACTR3Q96KR7 559 aa16.95■□□□□ 0.3
PCDHGB7-201ENST00000398594 CT47A1Q5JQC4 288 aaPredicted RBP16.95■□□□□ 0.3
PCDHGB7-201ENST00000398594 ZSCAN31Q96LW9 406 aaPredicted RBP16.95■□□□□ 0.3
PCDHGB7-201ENST00000398594 PUS7Q96PZ0 661 aaKnown RBP16.95■□□□□ 0.3
PCDHGB7-201ENST00000398594 UHRF1BP1Q6BDS2 1440 aa16.95■□□□□ 0.3
PCDHGB7-201ENST00000398594 TSHZ3Q63HK5 1081 aa16.95■□□□□ 0.3
PCDHGB7-201ENST00000398594 NIP7Q9Y221 180 aaKnown RBP eCLIP16.94■□□□□ 0.3
PCDHGB7-201ENST00000398594 KRT24Q2M2I5 525 aa16.94■□□□□ 0.3
PCDHGB7-201ENST00000398594 FERMT3Q86UX7 667 aa16.94■□□□□ 0.3
PCDHGB7-201ENST00000398594 SIRT1Q96EB6 747 aa16.94■□□□□ 0.3
PCDHGB7-201ENST00000398594 NOL7Q9UMY1 257 aaKnown RBP16.94■□□□□ 0.3
PCDHGB7-201ENST00000398594 A0A1W2PP64 1363 aa16.94■□□□□ 0.3
PCDHGB7-201ENST00000398594 TCOF1Q13428 1488 aaKnown RBP16.94■□□□□ 0.3
PCDHGB7-201ENST00000398594 GOLGA6L1Q8N7Z2 621 aa16.94■□□□□ 0.3
PCDHGB7-201ENST00000398594 BRPF1P55201 1214 aaPredicted RBP16.93■□□□□ 0.3
PCDHGB7-201ENST00000398594 LMBR1LQ6UX01 489 aa16.93■□□□□ 0.3
PCDHGB7-201ENST00000398594 HOXC9P31274 260 aa16.93■□□□□ 0.3
PCDHGB7-201ENST00000398594 IP6K1Q92551 441 aa16.93■□□□□ 0.3
PCDHGB7-201ENST00000398594 NLRP3Q96P20 1036 aa16.93■□□□□ 0.3
PCDHGB7-201ENST00000398594 IQSEC3Q9UPP2 1182 aaPredicted RBP16.93■□□□□ 0.3
PCDHGB7-201ENST00000398594 ZNF444Q8N0Y2 327 aaPredicted RBP16.93■□□□□ 0.3
PCDHGB7-201ENST00000398594 DDX17Q92841 729 aaKnown RBP16.93■□□□□ 0.3
PCDHGB7-201ENST00000398594 TRIM5Q9C035 493 aa16.93■□□□□ 0.3
PCDHGB7-201ENST00000398594 CEP170Q5SW79 1584 aa16.93■□□□□ 0.3
PCDHGB7-201ENST00000398594 ZNF213O14771 459 aa16.92■□□□□ 0.3
PCDHGB7-201ENST00000398594 ZNF76P36508 570 aa16.92■□□□□ 0.3
PCDHGB7-201ENST00000398594 TTLL12Q14166 644 aaPredicted RBP16.92■□□□□ 0.3
PCDHGB7-201ENST00000398594 CCDC152Q4G0S7 254 aa16.92■□□□□ 0.3
PCDHGB7-201ENST00000398594 ASXL1Q8IXJ9 1541 aa16.92■□□□□ 0.3
PCDHGB7-201ENST00000398594 TFCP2L1Q9NZI6 479 aa16.92■□□□□ 0.3
PCDHGB7-201ENST00000398594 ST5P78524 1137 aa16.92■□□□□ 0.3
PCDHGB7-201ENST00000398594 IQCA1Q86XH1 822 aa16.92■□□□□ 0.3
PCDHGB7-201ENST00000398594 DCAF5Q96JK2 942 aa16.91■□□□□ 0.3
PCDHGB7-201ENST00000398594 KSR2Q6VAB6 950 aa16.91■□□□□ 0.3
PCDHGB7-201ENST00000398594 CCDC83Q8IWF9 413 aa16.91■□□□□ 0.3
PCDHGB7-201ENST00000398594 ZFYVE27Q5T4F4 411 aa16.9■□□□□ 0.3
PCDHGB7-201ENST00000398594 GRM8O00222 908 aa16.9■□□□□ 0.3
PCDHGB7-201ENST00000398594 CCDC70Q6NSX1 233 aa16.9■□□□□ 0.3
PCDHGB7-201ENST00000398594 DZIP3Q86Y13 1208 aaKnown RBP16.9■□□□□ 0.3
PCDHGB7-201ENST00000398594 ABCC1P33527 1531 aa16.9■□□□□ 0.3
PCDHGB7-201ENST00000398594 LDHCP07864 332 aa16.9■□□□□ 0.3
PCDHGB7-201ENST00000398594 WDR78Q5VTH9 848 aa16.9■□□□□ 0.3
PCDHGB7-201ENST00000398594 ANKRD18AQ8IVF6 992 aa16.9■□□□□ 0.3
PCDHGB7-201ENST00000398594 SLF2Q8IX21 1173 aa16.9■□□□□ 0.3
PCDHGB7-201ENST00000398594 SLAIN2Q9P270 581 aa16.9■□□□□ 0.3
PCDHGB7-201ENST00000398594 SHANK2Q9UPX8 1470 aa16.9■□□□□ 0.3
PCDHGB7-201ENST00000398594 MAPKBP1O60336 1514 aa16.9■□□□□ 0.3
PCDHGB7-201ENST00000398594 CTCFLQ8NI51 663 aaPredicted RBP16.9■□□□□ 0.3
PCDHGB7-201ENST00000398594 LTKP29376 864 aa16.89■□□□□ 0.29
PCDHGB7-201ENST00000398594 TSPYL6Q8N831 410 aa16.89■□□□□ 0.29
PCDHGB7-201ENST00000398594 RHPN1Q8TCX5 695 aa16.89■□□□□ 0.29
PCDHGB7-201ENST00000398594 SMC2O95347 1197 aa16.89■□□□□ 0.29
PCDHGB7-201ENST00000398594 NASPP49321 788 aaPredicted RBP16.89■□□□□ 0.29
PCDHGB7-201ENST00000398594 SLC4A8Q2Y0W8 1093 aa16.89■□□□□ 0.29
PCDHGB7-201ENST00000398594 RTCBQ9Y3I0 505 aaKnown RBP16.89■□□□□ 0.29
PCDHGB7-201ENST00000398594 TRPM2O94759 1503 aa16.89■□□□□ 0.29
PCDHGB7-201ENST00000398594 CCDC96Q2M329 555 aa16.89■□□□□ 0.29
PCDHGB7-201ENST00000398594 ODF2Q5BJF6 829 aa16.89■□□□□ 0.29
PCDHGB7-201ENST00000398594 SPATA32Q96LK8 384 aa16.89■□□□□ 0.29
PCDHGB7-201ENST00000398594 EVI5LQ96CN4 794 aa16.88■□□□□ 0.29
PCDHGB7-201ENST00000398594 FAM13BQ9NYF5 915 aa16.88■□□□□ 0.29
PCDHGB7-201ENST00000398594 HAND2P61296 217 aa16.88■□□□□ 0.29
PCDHGB7-201ENST00000398594 WASF1Q92558 559 aa16.88■□□□□ 0.29
PCDHGB7-201ENST00000398594 IFIT3O14879 490 aaKnown RBP16.88■□□□□ 0.29
PCDHGB7-201ENST00000398594 ARHGAP45Q92619 1136 aa16.88■□□□□ 0.29
PCDHGB7-201ENST00000398594 PAXIP1Q6ZW49 1069 aaPredicted RBP16.88■□□□□ 0.29
PCDHGB7-201ENST00000398594 MAGEC2Q9UBF1 373 aaPredicted RBP16.88■□□□□ 0.29
PCDHGB7-201ENST00000398594 ATP7AQ04656 1500 aa16.87■□□□□ 0.29
PCDHGB7-201ENST00000398594 ATP2B3Q16720 1220 aa16.87■□□□□ 0.29
PCDHGB7-201ENST00000398594 FILIP1LQ4L180 1135 aa16.87■□□□□ 0.29
PCDHGB7-201ENST00000398594 WWC2Q6AWC2 1192 aa16.87■□□□□ 0.29
PCDHGB7-201ENST00000398594 LINS1Q8NG48 757 aa16.87■□□□□ 0.29
PCDHGB7-201ENST00000398594 LARP6Q9BRS8 491 aaKnown RBP16.87■□□□□ 0.29
PCDHGB7-201ENST00000398594 SEC63Q9UGP8 760 aaKnown RBP16.87■□□□□ 0.29
PCDHGB7-201ENST00000398594 RNF41Q9H4P4 317 aaPredicted RBP16.87■□□□□ 0.29
PCDHGB7-201ENST00000398594 CWF19L2Q2TBE0 894 aaKnown RBP16.86■□□□□ 0.29
PCDHGB7-201ENST00000398594 TNMDQ9H2S6 317 aa16.86■□□□□ 0.29
PCDHGB7-201ENST00000398594 CFAP45Q9UL16 551 aa16.86■□□□□ 0.29
PCDHGB7-201ENST00000398594 POLR3AO14802 1390 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 5.9 ms