RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 NUTM2GQ5VZR2 741 aa11.92□□□□□ -0.5
APTX-207ENST00000397172 TEX2Q8IWB9 1127 aa11.92□□□□□ -0.5
APTX-207ENST00000397172 KRT222Q8N1A0 295 aa11.92□□□□□ -0.5
APTX-207ENST00000397172 GPT2Q8TD30 523 aa11.92□□□□□ -0.5
APTX-207ENST00000397172 PAXBP1Q9Y5B6 917 aa11.92□□□□□ -0.5
APTX-207ENST00000397172 CRYBG1Q9Y4K1 1723 aa11.92□□□□□ -0.5
APTX-207ENST00000397172 SLIT3O75094 1523 aa11.92□□□□□ -0.5
APTX-207ENST00000397172 GCP02774 474 aa11.91□□□□□ -0.5
APTX-207ENST00000397172 HAP1P54257 671 aaPredicted RBP11.91□□□□□ -0.5
APTX-207ENST00000397172 ATF7IPQ6VMQ6 1270 aa11.91□□□□□ -0.5
APTX-207ENST00000397172 ZNF830Q96NB3 372 aaPredicted RBP11.91□□□□□ -0.5
APTX-207ENST00000397172 NUTM2BA6NNL0 878 aaPredicted RBP11.91□□□□□ -0.5
APTX-207ENST00000397172 NUTM2EB1AL46 878 aaPredicted RBP11.91□□□□□ -0.5
APTX-207ENST00000397172 U2AF2P26368 475 aaKnown RBP eCLIP11.91□□□□□ -0.59e-15■■■■■ 42.9
APTX-207ENST00000397172 RNF20Q5VTR2 975 aa11.91□□□□□ -0.5
APTX-207ENST00000397172 NUTM2AQ8IVF1 878 aaPredicted RBP11.91□□□□□ -0.5
APTX-207ENST00000397172 CABLES1Q8TDN4 633 aa11.91□□□□□ -0.5
APTX-207ENST00000397172 EFCC1Q9HA90 598 aa11.91□□□□□ -0.5
APTX-207ENST00000397172 SMC4Q9NTJ3 1288 aa11.91□□□□□ -0.5
APTX-207ENST00000397172 TMEM63CQ9P1W3 806 aa11.91□□□□□ -0.5
APTX-207ENST00000397172 USP25Q9UHP3 1055 aa11.91□□□□□ -0.5
APTX-207ENST00000397172 MORC2Q9Y6X9 1032 aaPredicted RBP11.91□□□□□ -0.5
APTX-207ENST00000397172 LRP6O75581 1613 aa11.91□□□□□ -0.5
APTX-207ENST00000397172 CPDO75976 1380 aa11.91□□□□□ -0.5
APTX-207ENST00000397172 ABCA3Q99758 1704 aa11.9□□□□□ -0.5
APTX-207ENST00000397172 KIF20BQ96Q89 1820 aa11.9□□□□□ -0.5
APTX-207ENST00000397172 PHRF1Q9P1Y6 1649 aaKnown RBP11.9□□□□□ -0.5
APTX-207ENST00000397172 CTR9Q6PD62 1173 aa11.9□□□□□ -0.5
APTX-207ENST00000397172 TBC1D9Q6ZT07 1266 aa11.9□□□□□ -0.5
APTX-207ENST00000397172 GGNBP2Q9H3C7 697 aa11.9□□□□□ -0.5
APTX-207ENST00000397172 DDX41Q9UJV9 622 aaKnown RBP11.9□□□□□ -0.5
APTX-207ENST00000397172 MARF1Q9Y4F3 1742 aaKnown RBP11.89□□□□□ -0.51
APTX-207ENST00000397172 SMTNL1A8MU46 457 aa11.89□□□□□ -0.51
APTX-207ENST00000397172 INTS3Q68E01 1043 aaKnown RBP11.89□□□□□ -0.51
APTX-207ENST00000397172 RNF214Q8ND24 703 aa11.89□□□□□ -0.51
APTX-207ENST00000397172 YY1AP1Q9H869 796 aa11.89□□□□□ -0.51
APTX-207ENST00000397172 ZRANB1Q9UGI0 708 aa11.89□□□□□ -0.51
APTX-207ENST00000397172 RIOK3O14730 519 aaKnown RBP11.89□□□□□ -0.51
APTX-207ENST00000397172 TERF2Q15554 542 aa11.89□□□□□ -0.51
APTX-207ENST00000397172 MEX3CQ5U5Q3 659 aaKnown RBP11.89□□□□□ -0.51
APTX-207ENST00000397172 TCP11L2Q8N4U5 519 aa11.89□□□□□ -0.51
APTX-207ENST00000397172 ZNF428Q96B54 188 aa11.89□□□□□ -0.51
APTX-207ENST00000397172 VGLL3A8MV65 326 aa11.88□□□□□ -0.51
APTX-207ENST00000397172 ADAMTS2O95450 1211 aa11.88□□□□□ -0.51
APTX-207ENST00000397172 CCDC183Q5T5S1 534 aa11.88□□□□□ -0.51
APTX-207ENST00000397172 LNPKQ9C0E8 428 aa11.88□□□□□ -0.51
APTX-207ENST00000397172 ZBTB40Q9NUA8 1239 aa11.88□□□□□ -0.51
APTX-207ENST00000397172 RBM27Q9P2N5 1060 aaKnown RBP11.88□□□□□ -0.51
APTX-207ENST00000397172 NFAT5O94916 1531 aa11.87□□□□□ -0.51
APTX-207ENST00000397172 TULP2O00295 520 aa11.87□□□□□ -0.51
APTX-207ENST00000397172 REC8O95072 547 aa11.87□□□□□ -0.51
APTX-207ENST00000397172 ADCY5O95622 1261 aa11.87□□□□□ -0.51
APTX-207ENST00000397172 SLFN14P0C7P3 912 aa11.87□□□□□ -0.51
APTX-207ENST00000397172 KIAA1524Q8TCG1 905 aa11.87□□□□□ -0.51
APTX-207ENST00000397172 CTNNA3Q9UI47 895 aa11.87□□□□□ -0.51
APTX-207ENST00000397172 ANKRD26Q9UPS8 1709 aa11.87□□□□□ -0.51
APTX-207ENST00000397172 AATKQ6ZMQ8 1374 aa11.86□□□□□ -0.51
APTX-207ENST00000397172 KIAA0232Q92628 1395 aa11.86□□□□□ -0.51
APTX-207ENST00000397172 IL16Q14005 1332 aa11.86□□□□□ -0.51
APTX-207ENST00000397172 HTATSF1O43719 755 aaKnown RBP11.86□□□□□ -0.51
APTX-207ENST00000397172 CD2BP2O95400 341 aaKnown RBP11.86□□□□□ -0.51
APTX-207ENST00000397172 TNNT3P45378 269 aaPredicted RBP11.86□□□□□ -0.51
APTX-207ENST00000397172 ARHGEF25Q86VW2 580 aa11.86□□□□□ -0.51
APTX-207ENST00000397172 FNBP4Q8N3X1 1017 aaPredicted RBP11.86□□□□□ -0.51
APTX-207ENST00000397172 BCL2L13Q9BXK5 485 aa11.86□□□□□ -0.51
APTX-207ENST00000397172 PRDM11Q9NQV5 511 aa11.86□□□□□ -0.51
APTX-207ENST00000397172 FAM83GA6ND36 823 aa11.86□□□□□ -0.51
APTX-207ENST00000397172 TRIM27P14373 513 aa11.86□□□□□ -0.51
APTX-207ENST00000397172 ZC3H6P61129 1189 aaKnown RBP11.86□□□□□ -0.51
APTX-207ENST00000397172 TEX35Q5T0J7 233 aa11.86□□□□□ -0.51
APTX-207ENST00000397172 ANKRD45Q5TZF3 282 aa11.86□□□□□ -0.51
APTX-207ENST00000397172 ZNF397Q8NF99 534 aaPredicted RBP11.86□□□□□ -0.51
APTX-207ENST00000397172 C8orf37Q96NL8 207 aa11.86□□□□□ -0.51
APTX-207ENST00000397172 ABCC6O95255 1503 aa11.85□□□□□ -0.51
APTX-207ENST00000397172 KIF24Q5T7B8 1368 aa11.85□□□□□ -0.51
APTX-207ENST00000397172 KDM4AO75164 1064 aa11.85□□□□□ -0.51
APTX-207ENST00000397172 ALDH1L2Q3SY69 923 aa11.85□□□□□ -0.51
APTX-207ENST00000397172 MORC1Q86VD1 984 aa11.85□□□□□ -0.51
APTX-207ENST00000397172 CCDC112Q8NEF3 446 aa11.85□□□□□ -0.51
APTX-207ENST00000397172 NGLY1Q96IV0 654 aa11.85□□□□□ -0.51
APTX-207ENST00000397172 SLIT2O94813 1529 aa11.85□□□□□ -0.51
APTX-207ENST00000397172 COL14A1Q05707 1796 aaKnown RBP11.84□□□□□ -0.51
APTX-207ENST00000397172 PAXIP1Q6ZW49 1069 aaPredicted RBP11.84□□□□□ -0.51
APTX-207ENST00000397172 INTS4Q96HW7 963 aaKnown RBP11.84□□□□□ -0.51
APTX-207ENST00000397172 SOX12O15370 315 aa11.83□□□□□ -0.52
APTX-207ENST00000397172 MCCP23508 829 aa11.83□□□□□ -0.52
APTX-207ENST00000397172 NEUROD2Q15784 382 aa11.83□□□□□ -0.52
APTX-207ENST00000397172 AXDND1Q5T1B0 1012 aaPredicted RBP11.83□□□□□ -0.52
APTX-207ENST00000397172 PLCD3Q8N3E9 789 aa11.83□□□□□ -0.52
APTX-207ENST00000397172 KIF18AQ8NI77 898 aa11.83□□□□□ -0.52
APTX-207ENST00000397172 TTC12Q9H892 705 aaPredicted RBP11.83□□□□□ -0.52
APTX-207ENST00000397172 RTL1A6NKG5 1358 aa11.83□□□□□ -0.52
APTX-207ENST00000397172 CHRM1P11229 460 aaPredicted RBP11.83□□□□□ -0.52
APTX-207ENST00000397172 NCBP1Q09161 790 aaKnown RBP11.83□□□□□ -0.52
APTX-207ENST00000397172 SLFNL1Q499Z3 407 aa11.83□□□□□ -0.52
APTX-207ENST00000397172 ZNF772Q68DY9 489 aaPredicted RBP11.83□□□□□ -0.52
APTX-207ENST00000397172 TSC1Q92574 1164 aa11.83□□□□□ -0.52
APTX-207ENST00000397172 ATP6V1DQ9Y5K8 247 aa11.83□□□□□ -0.52
APTX-207ENST00000397172 NWD2Q9ULI1 1742 aa11.82□□□□□ -0.52
APTX-207ENST00000397172 AFF2P51816 1311 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms