RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 CHD1LQ86WJ1 897 aa20.3■□□□□ 0.84
MCF2L-208ENST00000397030 GRIPAP1Q4V328 841 aa20.3■□□□□ 0.84
MCF2L-208ENST00000397030 U3KPZ7 1027 aaPredicted RBP20.3■□□□□ 0.84
MCF2L-208ENST00000397030 ZNF213O14771 459 aa20.29■□□□□ 0.84
MCF2L-208ENST00000397030 TRAK2O60296 914 aa20.29■□□□□ 0.84
MCF2L-208ENST00000397030 SSRP1Q08945 709 aaKnown RBP20.29■□□□□ 0.84
MCF2L-208ENST00000397030 IFIT3O14879 490 aaKnown RBP20.29■□□□□ 0.84
MCF2L-208ENST00000397030 PPP1R42Q7Z4L9 355 aa20.29■□□□□ 0.84
MCF2L-208ENST00000397030 CDC5LQ99459 802 aaKnown RBP20.29■□□□□ 0.84
MCF2L-208ENST00000397030 RSPH6AQ9H0K4 717 aa20.29■□□□□ 0.84
MCF2L-208ENST00000397030 MBD3O95983 291 aa20.29■□□□□ 0.84
MCF2L-208ENST00000397030 KRT32Q14532 448 aa20.29■□□□□ 0.84
MCF2L-208ENST00000397030 A0A087WZG4 1122 aa20.29■□□□□ 0.84
MCF2L-208ENST00000397030 CCDC194A0A1B0GVG4 234 aa20.29■□□□□ 0.84
MCF2L-208ENST00000397030 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
MCF2L-208ENST00000397030 NBPF8Q3BBV2 869 aa20.29■□□□□ 0.84
MCF2L-208ENST00000397030 NBPF14Q5TI25 921 aa20.29■□□□□ 0.84
MCF2L-208ENST00000397030 RAB11FIP4Q86YS3 637 aa20.29■□□□□ 0.84
MCF2L-208ENST00000397030 GJA3Q9Y6H8 435 aa20.29■□□□□ 0.84
MCF2L-208ENST00000397030 CATIPQ7Z7H3 387 aa20.28■□□□□ 0.84
MCF2L-208ENST00000397030 UPF3BQ9BZI7 483 aaKnown RBP20.28■□□□□ 0.84
MCF2L-208ENST00000397030 WDR33Q9C0J8 1336 aaKnown RBP20.28■□□□□ 0.84
MCF2L-208ENST00000397030 TSPY2A6NKD2 308 aa20.28■□□□□ 0.84
MCF2L-208ENST00000397030 CCDC83Q8IWF9 413 aa20.28■□□□□ 0.84
MCF2L-208ENST00000397030 SNRKQ9NRH2 765 aa20.28■□□□□ 0.84
MCF2L-208ENST00000397030 AAMPQ13685 434 aa20.28■□□□□ 0.84
MCF2L-208ENST00000397030 NFE2L2Q16236 605 aa20.28■□□□□ 0.84
MCF2L-208ENST00000397030 AMOTQ4VCS5 1084 aa20.27■□□□□ 0.84
MCF2L-208ENST00000397030 FKBP15Q5T1M5 1219 aa20.27■□□□□ 0.84
MCF2L-208ENST00000397030 LEKR1Q6ZMV7 388 aa20.27■□□□□ 0.84
MCF2L-208ENST00000397030 KAT14Q9H8E8 782 aa20.27■□□□□ 0.84
MCF2L-208ENST00000397030 CFAP45Q9UL16 551 aa20.27■□□□□ 0.84
MCF2L-208ENST00000397030 GOLGA8AA7E2F4 631 aa20.27■□□□□ 0.84
MCF2L-208ENST00000397030 GOLGA8BA8MQT2 603 aa20.27■□□□□ 0.84
MCF2L-208ENST00000397030 CCDC61Q9Y6R9 512 aa20.27■□□□□ 0.84
MCF2L-208ENST00000397030 F6X3S4 739 aa20.27■□□□□ 0.84
MCF2L-208ENST00000397030 NSD3Q9BZ95 1437 aa20.27■□□□□ 0.84
MCF2L-208ENST00000397030 GSTTP1A0A1W2PQM5 241 aa20.27■□□□□ 0.83
MCF2L-208ENST00000397030 TCERG1LQ5VWI1 586 aa20.27■□□□□ 0.83
MCF2L-208ENST00000397030 FBXO31Q5XUX0 539 aaPredicted RBP20.27■□□□□ 0.83
MCF2L-208ENST00000397030 TMX1Q9H3N1 280 aa20.27■□□□□ 0.83
MCF2L-208ENST00000397030 IQSEC3Q9UPP2 1182 aaPredicted RBP20.27■□□□□ 0.83
MCF2L-208ENST00000397030 BAG3O95817 575 aa20.26■□□□□ 0.83
MCF2L-208ENST00000397030 CCDC91Q7Z6B0 441 aa20.26■□□□□ 0.83
MCF2L-208ENST00000397030 SETDB2Q96T68 719 aa20.26■□□□□ 0.83
MCF2L-208ENST00000397030 ZMYND15Q9H091 742 aa20.26■□□□□ 0.83
MCF2L-208ENST00000397030 BRD4O60885 1362 aaPredicted RBP20.26■□□□□ 0.83
MCF2L-208ENST00000397030 DPH6Q7L8W6 267 aa20.26■□□□□ 0.83
MCF2L-208ENST00000397030 OGFOD1Q8N543 542 aa20.26■□□□□ 0.83
MCF2L-208ENST00000397030 ANKRD30BQ9BXX2 1392 aa20.26■□□□□ 0.83
MCF2L-208ENST00000397030 SNAPC4Q5SXM2 1469 aa20.26■□□□□ 0.83
MCF2L-208ENST00000397030 RIMBP2O15034 1052 aa20.26■□□□□ 0.83
MCF2L-208ENST00000397030 LMOD1P29536 600 aaPredicted RBP20.26■□□□□ 0.83
MCF2L-208ENST00000397030 PARP3Q9Y6F1 533 aa20.26■□□□□ 0.83
MCF2L-208ENST00000397030 FERMT3Q86UX7 667 aa20.26■□□□□ 0.83
MCF2L-208ENST00000397030 RAB34Q9BZG1 259 aa20.26■□□□□ 0.83
MCF2L-208ENST00000397030 ATAD2Q6PL18 1390 aa20.26■□□□□ 0.83
MCF2L-208ENST00000397030 SPA17Q15506 151 aa20.25■□□□□ 0.83
MCF2L-208ENST00000397030 RFX1P22670 979 aa20.25■□□□□ 0.83
MCF2L-208ENST00000397030 CFAP100Q494V2 611 aa20.25■□□□□ 0.83
MCF2L-208ENST00000397030 PPFIA3O75145 1194 aa20.25■□□□□ 0.83
MCF2L-208ENST00000397030 CCT2P78371 535 aaKnown RBP20.25■□□□□ 0.83
MCF2L-208ENST00000397030 CWC15Q9P013 229 aaKnown RBP20.25■□□□□ 0.83
MCF2L-208ENST00000397030 MAP3K2Q9Y2U5 619 aa20.24■□□□□ 0.83
MCF2L-208ENST00000397030 PRC1O43663 620 aa20.24■□□□□ 0.83
MCF2L-208ENST00000397030 LMAN1P49257 510 aa20.24■□□□□ 0.83
MCF2L-208ENST00000397030 MRC2Q9UBG0 1479 aa20.24■□□□□ 0.83
MCF2L-208ENST00000397030 LDHAL6AQ6ZMR3 332 aa20.24■□□□□ 0.83
MCF2L-208ENST00000397030 SSX2IPQ9Y2D8 614 aa20.24■□□□□ 0.83
MCF2L-208ENST00000397030 MVPQ14764 893 aaKnown RBP20.23■□□□□ 0.83
MCF2L-208ENST00000397030 FILIP1Q7Z7B0 1213 aa20.23■□□□□ 0.83
MCF2L-208ENST00000397030 NUP62CLQ9H1M0 184 aa20.23■□□□□ 0.83
MCF2L-208ENST00000397030 KIF1BPQ96EK5 621 aa20.23■□□□□ 0.83
MCF2L-208ENST00000397030 LARP6Q9BRS8 491 aaKnown RBP20.23■□□□□ 0.83
MCF2L-208ENST00000397030 CFTRP13569 1480 aa20.23■□□□□ 0.83
MCF2L-208ENST00000397030 IQCEQ6IPM2 695 aa20.23■□□□□ 0.83
MCF2L-208ENST00000397030 DYDC1Q8WWB3 177 aa20.23■□□□□ 0.83
MCF2L-208ENST00000397030 ZSCAN31Q96LW9 406 aaPredicted RBP20.23■□□□□ 0.83
MCF2L-208ENST00000397030 UBE4AQ14139 1066 aa20.23■□□□□ 0.83
MCF2L-208ENST00000397030 K7ELQ4 463 aaPredicted RBP20.23■□□□□ 0.83
MCF2L-208ENST00000397030 GOLIM4O00461 696 aa20.23■□□□□ 0.83
MCF2L-208ENST00000397030 KIAA0754O94854 1291 aa20.23■□□□□ 0.83
MCF2L-208ENST00000397030 LRSAM1Q6UWE0 723 aa20.23■□□□□ 0.83
MCF2L-208ENST00000397030 PUS7Q96PZ0 661 aaKnown RBP20.23■□□□□ 0.83
MCF2L-208ENST00000397030 KIF21BO75037 1637 aa20.22■□□□□ 0.83
MCF2L-208ENST00000397030 NESP48681 1621 aa20.22■□□□□ 0.83
MCF2L-208ENST00000397030 FAM212AQ96EL1 285 aa20.22■□□□□ 0.83
MCF2L-208ENST00000397030 HAND2P61296 217 aa20.22■□□□□ 0.83
MCF2L-208ENST00000397030 TAF12Q16514 161 aa20.22■□□□□ 0.83
MCF2L-208ENST00000397030 TDRD12Q587J7 1177 aaKnown RBP20.22■□□□□ 0.83
MCF2L-208ENST00000397030 EPRSP07814 1512 aaKnown RBP20.22■□□□□ 0.83
MCF2L-208ENST00000397030 SYNCQ9H7C4 482 aa20.22■□□□□ 0.83
MCF2L-208ENST00000397030 CCDC196A0A1B0GTZ2 297 aa20.21■□□□□ 0.83
MCF2L-208ENST00000397030 FCHSD2O94868 740 aa20.21■□□□□ 0.83
MCF2L-208ENST00000397030 LDHCP07864 332 aa20.21■□□□□ 0.83
MCF2L-208ENST00000397030 ARL1P40616 181 aaPredicted RBP20.21■□□□□ 0.83
MCF2L-208ENST00000397030 PDE4BQ07343 736 aa20.21■□□□□ 0.83
MCF2L-208ENST00000397030 ANKRD24Q8TF21 1146 aa20.21■□□□□ 0.83
MCF2L-208ENST00000397030 CWC25Q9NXE8 425 aaPredicted RBP20.21■□□□□ 0.83
MCF2L-208ENST00000397030 TMEM57Q8N5G2 664 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms