RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 LTV1Q96GA3 475 aaPredicted RBP28.88■■■□□ 2.21
CSNK1E-203ENST00000396832 NRXN3Q9Y4C0 1643 aa28.88■■■□□ 2.21
CSNK1E-203ENST00000396832 SALL3Q9BXA9 1300 aa28.87■■■□□ 2.21
CSNK1E-203ENST00000396832 CPA1P15085 419 aa28.87■■■□□ 2.21
CSNK1E-203ENST00000396832 HCLS1P14317 486 aaPredicted RBP28.87■■■□□ 2.21
CSNK1E-203ENST00000396832 PLCB2Q00722 1185 aa28.87■■■□□ 2.21
CSNK1E-203ENST00000396832 CCDC183Q5T5S1 534 aa28.86■■■□□ 2.21
CSNK1E-203ENST00000396832 ESF1Q9H501 851 aaKnown RBP28.85■■■□□ 2.21
CSNK1E-203ENST00000396832 CNPY2Q9Y2B0 182 aa28.85■■■□□ 2.21
CSNK1E-203ENST00000396832 AMPHP49418 695 aa28.84■■■□□ 2.21
CSNK1E-203ENST00000396832 TRHP20396 242 aaPredicted RBP28.84■■■□□ 2.21
CSNK1E-203ENST00000396832 WDR33Q9C0J8 1336 aaKnown RBP28.84■■■□□ 2.21
CSNK1E-203ENST00000396832 SPDYE4A6NLX3 237 aa28.84■■■□□ 2.21
CSNK1E-203ENST00000396832 DDX54Q8TDD1 881 aaKnown RBP28.84■■■□□ 2.21
CSNK1E-203ENST00000396832 EYA1Q99502 592 aa28.84■■■□□ 2.21
CSNK1E-203ENST00000396832 NRKQ7Z2Y5 1582 aa28.83■■■□□ 2.21
CSNK1E-203ENST00000396832 PDCL2Q8N4E4 241 aa28.83■■■□□ 2.21
CSNK1E-203ENST00000396832 SRCIN1Q9C0H9 1055 aa28.83■■■□□ 2.21
CSNK1E-203ENST00000396832 AKAP12Q02952 1782 aa28.83■■■□□ 2.2
CSNK1E-203ENST00000396832 KDM4AO75164 1064 aa28.82■■■□□ 2.2
CSNK1E-203ENST00000396832 PHAXQ9H814 394 aaKnown RBP28.82■■■□□ 2.2
CSNK1E-203ENST00000396832 KIF20AO95235 890 aa28.82■■■□□ 2.2
CSNK1E-203ENST00000396832 ATP8B2P98198 1209 aa28.82■■■□□ 2.2
CSNK1E-203ENST00000396832 SLC26A8Q96RN1 970 aa28.81■■■□□ 2.2
CSNK1E-203ENST00000396832 FIBPO43427 364 aa28.81■■■□□ 2.2
CSNK1E-203ENST00000396832 SURF6O75683 361 aaKnown RBP28.81■■■□□ 2.2
CSNK1E-203ENST00000396832 ANAPC15P60006 121 aa28.81■■■□□ 2.2
CSNK1E-203ENST00000396832 GNAI3P08754 354 aa28.8■■■□□ 2.2
CSNK1E-203ENST00000396832 SPG7Q9UQ90 795 aa28.8■■■□□ 2.2
CSNK1E-203ENST00000396832 OVOS2A0A0J9YW53 1432 aa28.8■■■□□ 2.2
CSNK1E-203ENST00000396832 OVOS2Q6IE36 1432 aa28.8■■■□□ 2.2
CSNK1E-203ENST00000396832 LETM1O95202 739 aaPredicted RBP28.8■■■□□ 2.2
CSNK1E-203ENST00000396832 UBTFL1P0CB47 393 aaPredicted RBP28.8■■■□□ 2.2
CSNK1E-203ENST00000396832 USHBP1Q8N6Y0 703 aa28.79■■■□□ 2.2
CSNK1E-203ENST00000396832 EIF2S2P20042 333 aaKnown RBP28.79■■■□□ 2.2
CSNK1E-203ENST00000396832 CWC27Q6UX04 472 aaKnown RBP28.78■■■□□ 2.2
CSNK1E-203ENST00000396832 TMEM87AQ8NBN3 555 aa28.78■■■□□ 2.2
CSNK1E-203ENST00000396832 USP44Q9H0E7 712 aa28.78■■■□□ 2.2
CSNK1E-203ENST00000396832 DIAPH3Q9NSV4 1193 aa28.78■■■□□ 2.2
CSNK1E-203ENST00000396832 RIOK3O14730 519 aaKnown RBP28.78■■■□□ 2.2
CSNK1E-203ENST00000396832 CCDC30Q5VVM6 783 aa28.78■■■□□ 2.2
CSNK1E-203ENST00000396832 KIAA1524Q8TCG1 905 aa28.78■■■□□ 2.2
CSNK1E-203ENST00000396832 CEP170BQ9Y4F5 1589 aaPredicted RBP28.77■■■□□ 2.2
CSNK1E-203ENST00000396832 CEBPAP49715 358 aaPredicted RBP28.77■■■□□ 2.2
CSNK1E-203ENST00000396832 CHAF1AQ13111 956 aaPredicted RBP28.77■■■□□ 2.2
CSNK1E-203ENST00000396832 RASEFQ8IZ41 740 aa28.77■■■□□ 2.2
CSNK1E-203ENST00000396832 PPP1R42Q7Z4L9 355 aa28.76■■■□□ 2.19
CSNK1E-203ENST00000396832 ANXA1P04083 346 aa28.76■■■□□ 2.19
CSNK1E-203ENST00000396832 PYCARDQ9ULZ3 195 aa28.76■■■□□ 2.19
CSNK1E-203ENST00000396832 USP6P35125 1406 aa28.76■■■□□ 2.19
CSNK1E-203ENST00000396832 RPAP1Q9BWH6 1393 aaPredicted RBP28.75■■■□□ 2.19
CSNK1E-203ENST00000396832 U2AF2P26368 475 aaKnown RBP eCLIP28.75■■■□□ 2.194e-7■■■□□ 16.5
CSNK1E-203ENST00000396832 KCNF1Q9H3M0 494 aa28.75■■■□□ 2.19
CSNK1E-203ENST00000396832 AK2P54819 239 aa28.74■■■□□ 2.19
CSNK1E-203ENST00000396832 NGDNQ8NEJ9 315 aaKnown RBP28.74■■■□□ 2.19
CSNK1E-203ENST00000396832 LARGE1O95461 756 aa28.73■■■□□ 2.19
CSNK1E-203ENST00000396832 SRGAP3O43295 1099 aa28.73■■■□□ 2.19
CSNK1E-203ENST00000396832 AP5Z1O43299 807 aa28.73■■■□□ 2.19
CSNK1E-203ENST00000396832 UBE2HP62256 183 aa28.73■■■□□ 2.19
CSNK1E-203ENST00000396832 ANKRD7Q92527 254 aa28.73■■■□□ 2.19
CSNK1E-203ENST00000396832 CHMP3Q9Y3E7 222 aa28.73■■■□□ 2.19
CSNK1E-203ENST00000396832 TUBGCP6Q96RT7 1819 aa28.73■■■□□ 2.19
CSNK1E-203ENST00000396832 HSPA4P34932 840 aa28.73■■■□□ 2.19
CSNK1E-203ENST00000396832 SPATA31D1Q6ZQQ2 1576 aa28.72■■■□□ 2.19
CSNK1E-203ENST00000396832 HDGFL1Q5TGJ6 251 aa28.72■■■□□ 2.19
CSNK1E-203ENST00000396832 SNX14Q9Y5W7 946 aa28.72■■■□□ 2.19
CSNK1E-203ENST00000396832 KIF13AQ9H1H9 1805 aa28.72■■■□□ 2.19
CSNK1E-203ENST00000396832 GIMAP6Q6P9H5 292 aa28.72■■■□□ 2.19
CSNK1E-203ENST00000396832 SOS1Q07889 1333 aaPredicted RBP28.72■■■□□ 2.19
CSNK1E-203ENST00000396832 NBPF7P0C2Y1 421 aaPredicted RBP28.71■■■□□ 2.19
CSNK1E-203ENST00000396832 SPC24Q8NBT2 197 aa28.71■■■□□ 2.19
CSNK1E-203ENST00000396832 IL17REQ8NFR9 667 aa28.7■■■□□ 2.19
CSNK1E-203ENST00000396832 ARHGEF10O15013 1369 aa28.7■■■□□ 2.18
CSNK1E-203ENST00000396832 GNAT3A8MTJ3 354 aa28.7■■■□□ 2.18
CSNK1E-203ENST00000396832 STAP2Q9UGK3 403 aa28.7■■■□□ 2.18
CSNK1E-203ENST00000396832 IGSF3O75054 1194 aa28.69■■■□□ 2.18
CSNK1E-203ENST00000396832 ZSCAN22P10073 491 aaPredicted RBP28.69■■■□□ 2.18
CSNK1E-203ENST00000396832 CASTP20810 708 aaKnown RBP28.69■■■□□ 2.18
CSNK1E-203ENST00000396832 SYT1P21579 422 aa28.69■■■□□ 2.18
CSNK1E-203ENST00000396832 RUFY3Q7L099 469 aa28.69■■■□□ 2.18
CSNK1E-203ENST00000396832 C14orf37Q86TY3 774 aa28.69■■■□□ 2.18
CSNK1E-203ENST00000396832 CCDC83Q8IWF9 413 aa28.69■■■□□ 2.18
CSNK1E-203ENST00000396832 FUCA2Q9BTY2 467 aa28.69■■■□□ 2.18
CSNK1E-203ENST00000396832 RGPD1P0DJD0 1748 aa28.69■■■□□ 2.18
CSNK1E-203ENST00000396832 RHPN1Q8TCX5 695 aa28.69■■■□□ 2.18
CSNK1E-203ENST00000396832 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.69■■■□□ 2.18
CSNK1E-203ENST00000396832 CTIFO43310 598 aaKnown RBP28.68■■■□□ 2.18
CSNK1E-203ENST00000396832 FLT4P35916 1363 aa28.68■■■□□ 2.18
CSNK1E-203ENST00000396832 OS9Q13438 667 aaPredicted RBP28.68■■■□□ 2.18
CSNK1E-203ENST00000396832 PI4K2BQ8TCG2 481 aa28.68■■■□□ 2.18
CSNK1E-203ENST00000396832 IL17RAQ96F46 866 aa28.68■■■□□ 2.18
CSNK1E-203ENST00000396832 TPM3P06753 285 aa28.67■■■□□ 2.18
CSNK1E-203ENST00000396832 NLRP6P59044 892 aa28.67■■■□□ 2.18
CSNK1E-203ENST00000396832 RAD50Q92878 1312 aa28.67■■■□□ 2.18
CSNK1E-203ENST00000396832 STX6O43752 255 aa28.67■■■□□ 2.18
CSNK1E-203ENST00000396832 SMC3Q9UQE7 1217 aa28.66■■■□□ 2.18
CSNK1E-203ENST00000396832 SGSM2O43147 1006 aa28.66■■■□□ 2.18
CSNK1E-203ENST00000396832 SSH2Q76I76 1423 aa28.65■■■□□ 2.18
CSNK1E-203ENST00000396832 LTKP29376 864 aa28.65■■■□□ 2.18
CSNK1E-203ENST00000396832 DNM1Q05193 864 aaKnown RBP28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms