RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 SNRPA1P09661 255 aaKnown RBP16.16■□□□□ 0.18
TRIM39-204ENST00000396548 DBF4Q9UBU7 674 aaPredicted RBP16.16■□□□□ 0.18
TRIM39-204ENST00000396548 IGHDP01880 384 aa16.16■□□□□ 0.18
TRIM39-204ENST00000396548 PROSER3Q2NL68 480 aa16.16■□□□□ 0.18
TRIM39-204ENST00000396548 TTC5Q8N0Z6 440 aa16.16■□□□□ 0.18
TRIM39-204ENST00000396548 ONECUT3O60422 494 aaPredicted RBP16.15■□□□□ 0.18
TRIM39-204ENST00000396548 TMOD3Q9NYL9 352 aa16.15■□□□□ 0.18
TRIM39-204ENST00000396548 FAM98CQ17RN3 349 aaKnown RBP16.15■□□□□ 0.18
TRIM39-204ENST00000396548 ATG3Q9NT62 314 aa16.15■□□□□ 0.18
TRIM39-204ENST00000396548 USP16Q9Y5T5 823 aa16.14■□□□□ 0.17
TRIM39-204ENST00000396548 ZNF831Q5JPB2 1677 aa16.14■□□□□ 0.17
TRIM39-204ENST00000396548 ADCY9O60503 1353 aa16.14■□□□□ 0.17
TRIM39-204ENST00000396548 DDX21Q9NR30 783 aaKnown RBP eCLIP16.14■□□□□ 0.17
TRIM39-204ENST00000396548 CCDC9Q9Y3X0 531 aaKnown RBP16.14■□□□□ 0.17
TRIM39-204ENST00000396548 F6X3S4 739 aa16.13■□□□□ 0.17
TRIM39-204ENST00000396548 CENPQQ7L2Z9 268 aaPredicted RBP16.13■□□□□ 0.17
TRIM39-204ENST00000396548 GJD4Q96KN9 370 aaPredicted RBP16.13■□□□□ 0.17
TRIM39-204ENST00000396548 NUP188Q5SRE5 1749 aa16.13■□□□□ 0.17
TRIM39-204ENST00000396548 ASAP1Q9ULH1 1129 aa16.13■□□□□ 0.17
TRIM39-204ENST00000396548 ATP10DQ9P241 1426 aa16.13■□□□□ 0.17
TRIM39-204ENST00000396548 NHSQ6T4R5 1651 aa16.12■□□□□ 0.17
TRIM39-204ENST00000396548 MEX3CQ5U5Q3 659 aaKnown RBP16.12■□□□□ 0.17
TRIM39-204ENST00000396548 RREB1Q92766 1687 aa16.12■□□□□ 0.17
TRIM39-204ENST00000396548 SBF2Q86WG5 1849 aa16.12■□□□□ 0.17
TRIM39-204ENST00000396548 HYPKQ9NX55 129 aa16.12■□□□□ 0.17
TRIM39-204ENST00000396548 ARFGEF2Q9Y6D5 1785 aa16.12■□□□□ 0.17
TRIM39-204ENST00000396548 ANXA1P04083 346 aa16.12■□□□□ 0.17
TRIM39-204ENST00000396548 FKBP5Q13451 457 aaPredicted RBP16.11■□□□□ 0.17
TRIM39-204ENST00000396548 VSIG10Q8N0Z9 540 aa16.11■□□□□ 0.17
TRIM39-204ENST00000396548 CCT4P50991 539 aaKnown RBP16.11■□□□□ 0.17
TRIM39-204ENST00000396548 PRIM1P49642 420 aaKnown RBP16.1■□□□□ 0.17
TRIM39-204ENST00000396548 HDAC1Q13547 482 aaPredicted RBP16.1■□□□□ 0.17
TRIM39-204ENST00000396548 ERBB4Q15303 1308 aa16.1■□□□□ 0.17
TRIM39-204ENST00000396548 SLC4A9Q96Q91 983 aa16.1■□□□□ 0.17
TRIM39-204ENST00000396548 IBTKQ9P2D0 1353 aaPredicted RBP16.1■□□□□ 0.17
TRIM39-204ENST00000396548 CHMP4BQ9H444 224 aaKnown RBP16.09■□□□□ 0.17
TRIM39-204ENST00000396548 TRPC5Q9UL62 973 aaPredicted RBP16.09■□□□□ 0.17
TRIM39-204ENST00000396548 NBPF26B4DH59 902 aa16.09■□□□□ 0.17
TRIM39-204ENST00000396548 NBPF14Q5TI25 921 aa16.09■□□□□ 0.17
TRIM39-204ENST00000396548 NBPF10Q6P3W6 841 aaKnown RBP16.09■□□□□ 0.17
TRIM39-204ENST00000396548 NBPF15Q8N660 670 aa16.09■□□□□ 0.17
TRIM39-204ENST00000396548 COL5A3P25940 1745 aaPredicted RBP16.08■□□□□ 0.17
TRIM39-204ENST00000396548 BRWD3Q6RI45 1802 aa16.08■□□□□ 0.17
TRIM39-204ENST00000396548 BEND3Q5T5X7 828 aa16.08■□□□□ 0.16
TRIM39-204ENST00000396548 SIRT2Q8IXJ6 389 aa16.08■□□□□ 0.16
TRIM39-204ENST00000396548 PI4KAP2A4QPH2 592 aa16.07■□□□□ 0.16
TRIM39-204ENST00000396548 PI4KAP1Q8N8J0 262 aa16.07■□□□□ 0.16
TRIM39-204ENST00000396548 BTAF1O14981 1849 aa16.07■□□□□ 0.16
TRIM39-204ENST00000396548 PTCD1O75127 700 aaKnown RBP16.07■□□□□ 0.16
TRIM39-204ENST00000396548 KSR2Q6VAB6 950 aa16.07■□□□□ 0.16
TRIM39-204ENST00000396548 MEIS3Q99687 375 aa16.06■□□□□ 0.16
TRIM39-204ENST00000396548 DNAAF4Q8WXU2 420 aa16.06■□□□□ 0.16
TRIM39-204ENST00000396548 SLC4A10Q6U841 1118 aa16.05■□□□□ 0.16
TRIM39-204ENST00000396548 RWDD1Q9H446 243 aaPredicted RBP16.05■□□□□ 0.16
TRIM39-204ENST00000396548 ACSBG1Q96GR2 724 aa16.04■□□□□ 0.16
TRIM39-204ENST00000396548 TEX13AQ9BXU3 409 aaPredicted RBP16.04■□□□□ 0.16
TRIM39-204ENST00000396548 USP44Q9H0E7 712 aa16.04■□□□□ 0.16
TRIM39-204ENST00000396548 C1orf115Q9H7X2 142 aa16.04■□□□□ 0.16
TRIM39-204ENST00000396548 QTRT2Q9H974 415 aaKnown RBP16.04■□□□□ 0.16
TRIM39-204ENST00000396548 LY75O60449 1722 aa16.04■□□□□ 0.16
TRIM39-204ENST00000396548 KCNQ2O43526 872 aa16.04■□□□□ 0.16
TRIM39-204ENST00000396548 MYL6BP14649 208 aa16.04■□□□□ 0.16
TRIM39-204ENST00000396548 XAGE3Q8WTP9 111 aa16.04■□□□□ 0.16
TRIM39-204ENST00000396548 MAP3K2Q9Y2U5 619 aa16.04■□□□□ 0.16
TRIM39-204ENST00000396548 PIP4K2AP48426 406 aaPredicted RBP16.03■□□□□ 0.16
TRIM39-204ENST00000396548 AFDNP55196 1824 aaKnown RBP16.03■□□□□ 0.16
TRIM39-204ENST00000396548 A1BGP04217 495 aa16.03■□□□□ 0.16
TRIM39-204ENST00000396548 COPS6Q7L5N1 327 aa16.03■□□□□ 0.16
TRIM39-204ENST00000396548 DNAJC10Q8IXB1 793 aa16.03■□□□□ 0.16
TRIM39-204ENST00000396548 CYP19A1P11511 503 aaPredicted RBP16.03■□□□□ 0.16
TRIM39-204ENST00000396548 SMC5Q8IY18 1101 aa16.03■□□□□ 0.16
TRIM39-204ENST00000396548 SKAP1Q86WV1 359 aa16.02■□□□□ 0.15
TRIM39-204ENST00000396548 SYTL4Q96C24 671 aaPredicted RBP16.02■□□□□ 0.15
TRIM39-204ENST00000396548 SRCIN1Q9C0H9 1055 aa16.02■□□□□ 0.15
TRIM39-204ENST00000396548 CEP85Q6P2H3 762 aa16.01■□□□□ 0.15
TRIM39-204ENST00000396548 ANKRD44Q8N8A2 993 aa16.01■□□□□ 0.15
TRIM39-204ENST00000396548 SEPT12Q8IYM1 358 aa16.01■□□□□ 0.15
TRIM39-204ENST00000396548 UTYO14607 1347 aa16.01■□□□□ 0.15
TRIM39-204ENST00000396548 ALDH1L1O75891 902 aa16.01■□□□□ 0.15
TRIM39-204ENST00000396548 DDX58O95786 925 aaKnown RBP16.01■□□□□ 0.15
TRIM39-204ENST00000396548 PTF1AQ7RTS3 328 aa16.01■□□□□ 0.15
TRIM39-204ENST00000396548 KAT6BQ8WYB5 2073 aa16.01■□□□□ 0.15
TRIM39-204ENST00000396548 MYH14Q7Z406 1995 aaKnown RBP16.01■□□□□ 0.15
TRIM39-204ENST00000396548 IGKV5-2P06315 115 aa16■□□□□ 0.15
TRIM39-204ENST00000396548 AIMP1Q12904 312 aaKnown RBP16■□□□□ 0.15
TRIM39-204ENST00000396548 ANKRD13DQ6ZTN6 518 aa16■□□□□ 0.15
TRIM39-204ENST00000396548 RBM42Q9BTD8 480 aaKnown RBP16■□□□□ 0.15
TRIM39-204ENST00000396548 METTL22Q9BUU2 404 aaPredicted RBP16■□□□□ 0.15
TRIM39-204ENST00000396548 PALLDQ8WX93 1383 aa16■□□□□ 0.15
TRIM39-204ENST00000396548 RPAP2Q8IXW5 612 aaPredicted RBP15.99■□□□□ 0.15
TRIM39-204ENST00000396548 GNAI3P08754 354 aa15.99■□□□□ 0.15
TRIM39-204ENST00000396548 LINS1Q8NG48 757 aa15.99■□□□□ 0.15
TRIM39-204ENST00000396548 PLBD2Q8NHP8 589 aa15.99■□□□□ 0.15
TRIM39-204ENST00000396548 ANKRD36CQ5JPF3 1778 aa15.99■□□□□ 0.15
TRIM39-204ENST00000396548 TAF1LQ8IZX4 1826 aa15.99■□□□□ 0.15
TRIM39-204ENST00000396548 FBXO41Q8TF61 875 aa15.98■□□□□ 0.15
TRIM39-204ENST00000396548 STARD3NLO95772 234 aa15.98■□□□□ 0.15
TRIM39-204ENST00000396548 GNAI2P04899 355 aa15.98■□□□□ 0.15
TRIM39-204ENST00000396548 TTLL7Q6ZT98 887 aa15.98■□□□□ 0.15
TRIM39-204ENST00000396548 ITPK1Q13572 414 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms