RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 KLHL34Q8N239 644 aa11.18□□□□□ -0.62
RAE1-202ENST00000395840 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.18□□□□□ -0.62
RAE1-202ENST00000395840 HMOX1P09601 288 aa11.18□□□□□ -0.62
RAE1-202ENST00000395840 NKX1-1Q15270 411 aaPredicted RBP11.18□□□□□ -0.62
RAE1-202ENST00000395840 MARCH10Q8NA82 808 aaPredicted RBP11.18□□□□□ -0.62
RAE1-202ENST00000395840 DDX54Q8TDD1 881 aaKnown RBP11.18□□□□□ -0.62
RAE1-202ENST00000395840 CDK11BP21127 795 aaKnown RBP11.17□□□□□ -0.62
RAE1-202ENST00000395840 CSPP1Q1MSJ5 1256 aa11.17□□□□□ -0.62
RAE1-202ENST00000395840 SKOR2Q2VWA4 1001 aaPredicted RBP11.17□□□□□ -0.62
RAE1-202ENST00000395840 HS1BP3Q53T59 392 aa11.17□□□□□ -0.62
RAE1-202ENST00000395840 AEBP1Q8IUX7 1158 aa11.17□□□□□ -0.62
RAE1-202ENST00000395840 AKAP4Q5JQC9 854 aa11.16□□□□□ -0.62
RAE1-202ENST00000395840 CGNQ9P2M7 1197 aaKnown RBP11.16□□□□□ -0.62
RAE1-202ENST00000395840 ZNF530Q6P9A1 599 aaPredicted RBP11.16□□□□□ -0.62
RAE1-202ENST00000395840 TNPO1Q92973 898 aaKnown RBP11.16□□□□□ -0.62
RAE1-202ENST00000395840 DCAF5Q96JK2 942 aa11.16□□□□□ -0.62
RAE1-202ENST00000395840 SOCS7O14512 581 aa11.15□□□□□ -0.62
RAE1-202ENST00000395840 PHKG2P15735 406 aa11.15□□□□□ -0.62
RAE1-202ENST00000395840 PRKAR2BP31323 418 aa11.15□□□□□ -0.62
RAE1-202ENST00000395840 TAF3Q5VWG9 929 aa11.15□□□□□ -0.62
RAE1-202ENST00000395840 SHANK3Q9BYB0 1731 aa11.15□□□□□ -0.62
RAE1-202ENST00000395840 HTATSF1O43719 755 aaKnown RBP11.15□□□□□ -0.62
RAE1-202ENST00000395840 DNTTIP2Q5QJE6 756 aaKnown RBP11.15□□□□□ -0.62
RAE1-202ENST00000395840 DUSP27Q5VZP5 1158 aa11.15□□□□□ -0.62
RAE1-202ENST00000395840 ERVV-2B6SEH9 535 aa11.14□□□□□ -0.63
RAE1-202ENST00000395840 ATP2B3Q16720 1220 aa11.14□□□□□ -0.63
RAE1-202ENST00000395840 JARID2Q92833 1246 aaPredicted RBP11.14□□□□□ -0.63
RAE1-202ENST00000395840 GBP4Q96PP9 640 aa11.14□□□□□ -0.63
RAE1-202ENST00000395840 CYP27B1O15528 508 aa11.14□□□□□ -0.63
RAE1-202ENST00000395840 ZFP91Q96JP5 570 aaPredicted RBP11.14□□□□□ -0.63
RAE1-202ENST00000395840 MAPK8IP2Q13387 824 aaPredicted RBP11.13□□□□□ -0.63
RAE1-202ENST00000395840 RUNDC1Q96C34 613 aa11.13□□□□□ -0.63
RAE1-202ENST00000395840 ZKSCAN5Q9Y2L8 839 aa11.13□□□□□ -0.63
RAE1-202ENST00000395840 NHSQ6T4R5 1651 aa11.13□□□□□ -0.63
RAE1-202ENST00000395840 GNAT3A8MTJ3 354 aa11.13□□□□□ -0.63
RAE1-202ENST00000395840 IGSF3O75054 1194 aa11.13□□□□□ -0.63
RAE1-202ENST00000395840 BAG6P46379 1132 aa11.13□□□□□ -0.63
RAE1-202ENST00000395840 LMOD3Q0VAK6 560 aa11.13□□□□□ -0.63
RAE1-202ENST00000395840 TSC1Q92574 1164 aa11.13□□□□□ -0.63
RAE1-202ENST00000395840 UPF1Q92900 1129 aaKnown RBP eCLIP11.13□□□□□ -0.63
RAE1-202ENST00000395840 MTHFSDQ2M296 383 aaKnown RBP11.12□□□□□ -0.63
RAE1-202ENST00000395840 HSCBQ8IWL3 235 aa11.12□□□□□ -0.63
RAE1-202ENST00000395840 ZNF710Q8N1W2 664 aa11.12□□□□□ -0.63
RAE1-202ENST00000395840 MAP3K5Q99683 1374 aa11.12□□□□□ -0.63
RAE1-202ENST00000395840 RTF1Q92541 710 aaKnown RBP11.12□□□□□ -0.63
RAE1-202ENST00000395840 PLEKHF1Q96S99 279 aa11.12□□□□□ -0.63
RAE1-202ENST00000395840 SBF2Q86WG5 1849 aa11.12□□□□□ -0.63
RAE1-202ENST00000395840 NCBP3Q53F19 620 aaKnown RBP11.11□□□□□ -0.63
RAE1-202ENST00000395840 C22orf23Q9BZE7 217 aa11.11□□□□□ -0.63
RAE1-202ENST00000395840 ADAMTS8Q9UP79 889 aa11.11□□□□□ -0.63
RAE1-202ENST00000395840 TRIM37O94972 964 aa11.11□□□□□ -0.63
RAE1-202ENST00000395840 DDIT3P35638 169 aa11.11□□□□□ -0.63
RAE1-202ENST00000395840 NGEFQ8N5V2 710 aa11.11□□□□□ -0.63
RAE1-202ENST00000395840 MYRIPQ8NFW9 859 aa11.11□□□□□ -0.63
RAE1-202ENST00000395840 SMARCC1Q92922 1105 aaPredicted RBP11.11□□□□□ -0.63
RAE1-202ENST00000395840 SPDYE4A6NLX3 237 aa11.1□□□□□ -0.63
RAE1-202ENST00000395840 PTMSP20962 102 aa11.1□□□□□ -0.63
RAE1-202ENST00000395840 NFE2L2Q16236 605 aa11.1□□□□□ -0.63
RAE1-202ENST00000395840 TMOD3Q9NYL9 352 aa11.1□□□□□ -0.63
RAE1-202ENST00000395840 RGPD3A6NKT7 1758 aaPredicted RBP11.1□□□□□ -0.63
RAE1-202ENST00000395840 RGPD4Q7Z3J3 1758 aa11.1□□□□□ -0.63
RAE1-202ENST00000395840 PLSCR1O15162 318 aa11.1□□□□□ -0.63
RAE1-202ENST00000395840 FAM182BQ5T319 152 aa11.1□□□□□ -0.63
RAE1-202ENST00000395840 PDLIM2Q96JY6 352 aa11.1□□□□□ -0.63
RAE1-202ENST00000395840 CABP4P57796 275 aa11.09□□□□□ -0.63
RAE1-202ENST00000395840 DOT1LQ8TEK3 1739 aa11.09□□□□□ -0.63
RAE1-202ENST00000395840 BCAR3O75815 825 aa11.09□□□□□ -0.63
RAE1-202ENST00000395840 APBA3O96018 575 aa11.09□□□□□ -0.63
RAE1-202ENST00000395840 MCM5P33992 734 aa11.09□□□□□ -0.63
RAE1-202ENST00000395840 PRIM1P49642 420 aaKnown RBP11.09□□□□□ -0.63
RAE1-202ENST00000395840 MFAP1P55081 439 aaKnown RBP11.09□□□□□ -0.63
RAE1-202ENST00000395840 PHACTR3Q96KR7 559 aa11.09□□□□□ -0.63
RAE1-202ENST00000395840 TNS1Q9HBL0 1735 aaKnown RBP11.09□□□□□ -0.63
RAE1-202ENST00000395840 E9PSI1 815 aa11.08□□□□□ -0.64
RAE1-202ENST00000395840 RNMTO43148 476 aaKnown RBP11.08□□□□□ -0.64
RAE1-202ENST00000395840 IRX5P78411 483 aaPredicted RBP11.08□□□□□ -0.64
RAE1-202ENST00000395840 RAB3GAP1Q15042 981 aa11.08□□□□□ -0.64
RAE1-202ENST00000395840 CLUAP1Q96AJ1 413 aa11.08□□□□□ -0.64
RAE1-202ENST00000395840 SYTL4Q96C24 671 aaPredicted RBP11.08□□□□□ -0.64
RAE1-202ENST00000395840 CHMP4AQ9BY43 222 aa11.08□□□□□ -0.64
RAE1-202ENST00000395840 SCN11AQ9UI33 1791 aa11.08□□□□□ -0.64
RAE1-202ENST00000395840 ADAMTS7Q9UKP4 1686 aa11.08□□□□□ -0.64
RAE1-202ENST00000395840 IBTKQ9P2D0 1353 aaPredicted RBP11.08□□□□□ -0.64
RAE1-202ENST00000395840 GOLGA2Q08379 1002 aa11.08□□□□□ -0.64
RAE1-202ENST00000395840 ZNF771Q7L3S4 317 aaPredicted RBP11.08□□□□□ -0.64
RAE1-202ENST00000395840 ACSBG1Q96GR2 724 aa11.08□□□□□ -0.64
RAE1-202ENST00000395840 DDX49Q9Y6V7 483 aaKnown RBP11.08□□□□□ -0.64
RAE1-202ENST00000395840 TEFQ10587 303 aa11.07□□□□□ -0.64
RAE1-202ENST00000395840 MPRIPQ6WCQ1 1025 aa11.07□□□□□ -0.64
RAE1-202ENST00000395840 TEX2Q8IWB9 1127 aa11.07□□□□□ -0.64
RAE1-202ENST00000395840 SLC52A2Q9HAB3 445 aa11.07□□□□□ -0.64
RAE1-202ENST00000395840 MRC1P22897 1456 aa11.07□□□□□ -0.64
RAE1-202ENST00000395840 KDM6AO15550 1401 aaPredicted RBP11.06□□□□□ -0.64
RAE1-202ENST00000395840 TMPOP42166 694 aaKnown RBP11.06□□□□□ -0.64
RAE1-202ENST00000395840 SLC27A3Q5K4L6 730 aa11.06□□□□□ -0.64
RAE1-202ENST00000395840 RBSNQ9H1K0 784 aa11.06□□□□□ -0.64
RAE1-202ENST00000395840 FAM177BA6PVY3 158 aa11.06□□□□□ -0.64
RAE1-202ENST00000395840 KLHL40Q2TBA0 621 aa11.06□□□□□ -0.64
RAE1-202ENST00000395840 SECISBP2LQ93073 1101 aaKnown RBP11.06□□□□□ -0.64
RAE1-202ENST00000395840 BABAM1Q9NWV8 329 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms