RNA–Protein interactions for RNA: ENST00000394957.7

VSIR-201, Transcript of V-set immunoregulatory receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSIR, Length 4,689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIR-201ENST00000394957 C20orf194Q5TEA3 1177 aa17.23■□□□□ 0.35
VSIR-201ENST00000394957 TMEM57Q8N5G2 664 aa17.23■□□□□ 0.35
VSIR-201ENST00000394957 IL1RAPL2Q9NP60 686 aa17.23■□□□□ 0.35
VSIR-201ENST00000394957 HOOK1Q9UJC3 728 aaKnown RBP17.23■□□□□ 0.35
VSIR-201ENST00000394957 TET3O43151 1660 aa17.23■□□□□ 0.35
VSIR-201ENST00000394957 ZRANB1Q9UGI0 708 aa17.23■□□□□ 0.35
VSIR-201ENST00000394957 NPC1L1Q9UHC9 1359 aa17.22■□□□□ 0.35
VSIR-201ENST00000394957 MAP3K19Q56UN5 1328 aa17.22■□□□□ 0.35
VSIR-201ENST00000394957 SPATA31E1Q6ZUB1 1445 aa17.22■□□□□ 0.35
VSIR-201ENST00000394957 CCDC47Q96A33 483 aaKnown RBP17.22■□□□□ 0.35
VSIR-201ENST00000394957 SRGAP3O43295 1099 aa17.21■□□□□ 0.35
VSIR-201ENST00000394957 SNRPA1P09661 255 aaKnown RBP17.21■□□□□ 0.35
VSIR-201ENST00000394957 HOXC9P31274 260 aa17.21■□□□□ 0.35
VSIR-201ENST00000394957 A0A087WZG4 1122 aa17.21■□□□□ 0.35
VSIR-201ENST00000394957 MCM2P49736 904 aa17.21■□□□□ 0.35
VSIR-201ENST00000394957 CARD14Q9BXL6 1004 aa17.21■□□□□ 0.35
VSIR-201ENST00000394957 FBLN1P23142 703 aa17.21■□□□□ 0.35
VSIR-201ENST00000394957 BTG4Q9NY30 223 aa17.21■□□□□ 0.35
VSIR-201ENST00000394957 PARD3Q8TEW0 1356 aa17.2■□□□□ 0.34
VSIR-201ENST00000394957 PRDM15P57071 1507 aaPredicted RBP17.2■□□□□ 0.34
VSIR-201ENST00000394957 CCDC158Q5M9N0 1113 aa17.2■□□□□ 0.34
VSIR-201ENST00000394957 AK7Q96M32 723 aa17.2■□□□□ 0.34
VSIR-201ENST00000394957 OFD1O75665 1012 aa17.2■□□□□ 0.34
VSIR-201ENST00000394957 SSR1P43307 286 aaKnown RBP17.2■□□□□ 0.34
VSIR-201ENST00000394957 SBNO1A3KN83 1393 aa17.19■□□□□ 0.34
VSIR-201ENST00000394957 METP08581 1390 aa17.19■□□□□ 0.34
VSIR-201ENST00000394957 MBD3O95983 291 aa17.19■□□□□ 0.34
VSIR-201ENST00000394957 PDCP20941 246 aa17.19■□□□□ 0.34
VSIR-201ENST00000394957 CEBPZQ03701 1054 aaKnown RBP17.19■□□□□ 0.34
VSIR-201ENST00000394957 RPAP2Q8IXW5 612 aaPredicted RBP17.19■□□□□ 0.34
VSIR-201ENST00000394957 RRP12Q5JTH9 1297 aaKnown RBP17.19■□□□□ 0.34
VSIR-201ENST00000394957 XRCC6P12956 609 aaKnown RBP eCLIP17.18■□□□□ 0.34
VSIR-201ENST00000394957 SSH1Q8WYL5 1049 aa17.18■□□□□ 0.34
VSIR-201ENST00000394957 CEP126Q9P2H0 1117 aa17.18■□□□□ 0.34
VSIR-201ENST00000394957 EXOC6BQ9Y2D4 811 aa17.18■□□□□ 0.34
VSIR-201ENST00000394957 IGHMBP2P38935 993 aaKnown RBP17.18■□□□□ 0.34
VSIR-201ENST00000394957 BICDL1Q6ZP65 573 aa17.18■□□□□ 0.34
VSIR-201ENST00000394957 TCEAL9Q9UHQ7 104 aa17.18■□□□□ 0.34
VSIR-201ENST00000394957 A2ML1A8K2U0 1454 aa17.18■□□□□ 0.34
VSIR-201ENST00000394957 HIP1O00291 1037 aa17.18■□□□□ 0.34
VSIR-201ENST00000394957 STK3Q13188 491 aa17.17■□□□□ 0.34
VSIR-201ENST00000394957 CNKSR2Q8WXI2 1034 aa17.17■□□□□ 0.34
VSIR-201ENST00000394957 CTDP1Q9Y5B0 961 aaPredicted RBP17.17■□□□□ 0.34
VSIR-201ENST00000394957 GLI2P10070 1586 aa17.17■□□□□ 0.34
VSIR-201ENST00000394957 KDM5CP41229 1560 aa17.17■□□□□ 0.34
VSIR-201ENST00000394957 CTR9Q6PD62 1173 aa17.17■□□□□ 0.34
VSIR-201ENST00000394957 DCAF5Q96JK2 942 aa17.17■□□□□ 0.34
VSIR-201ENST00000394957 EYA1Q99502 592 aa17.17■□□□□ 0.34
VSIR-201ENST00000394957 PCDH11XQ9BZA7 1347 aa17.16■□□□□ 0.34
VSIR-201ENST00000394957 PCDH11YQ9BZA8 1340 aa17.16■□□□□ 0.34
VSIR-201ENST00000394957 K7ELQ4 463 aaPredicted RBP17.16■□□□□ 0.34
VSIR-201ENST00000394957 GTF2A1P52655 376 aaPredicted RBP17.16■□□□□ 0.34
VSIR-201ENST00000394957 CYP46A1Q9Y6A2 500 aa17.16■□□□□ 0.34
VSIR-201ENST00000394957 KIF1BO60333 1816 aa17.16■□□□□ 0.34
VSIR-201ENST00000394957 RARSP54136 660 aaKnown RBP17.16■□□□□ 0.34
VSIR-201ENST00000394957 TEX35Q5T0J7 233 aa17.16■□□□□ 0.34
VSIR-201ENST00000394957 PTPRCP08575 1304 aa17.16■□□□□ 0.34
VSIR-201ENST00000394957 SART3Q15020 963 aaKnown RBP17.15■□□□□ 0.34
VSIR-201ENST00000394957 DNAAF4Q8WXU2 420 aa17.15■□□□□ 0.34
VSIR-201ENST00000394957 TRIM5Q9C035 493 aa17.15■□□□□ 0.34
VSIR-201ENST00000394957 FAM135BQ49AJ0 1406 aa17.15■□□□□ 0.34
VSIR-201ENST00000394957 KINO60870 393 aaKnown RBP17.15■□□□□ 0.34
VSIR-201ENST00000394957 CWC15Q9P013 229 aaKnown RBP17.15■□□□□ 0.34
VSIR-201ENST00000394957 NKTRP30414 1462 aaKnown RBP17.15■□□□□ 0.34
VSIR-201ENST00000394957 IQGAP3Q86VI3 1631 aa17.15■□□□□ 0.34
VSIR-201ENST00000394957 AACSQ86V21 672 aa17.15■□□□□ 0.34
VSIR-201ENST00000394957 CCDC39Q9UFE4 941 aa17.15■□□□□ 0.34
VSIR-201ENST00000394957 PLEKHH1Q9ULM0 1364 aa17.14■□□□□ 0.33
VSIR-201ENST00000394957 CDC42BPBQ9Y5S2 1711 aa17.14■□□□□ 0.33
VSIR-201ENST00000394957 TTC39AQ5SRH9 613 aa17.14■□□□□ 0.33
VSIR-201ENST00000394957 XBP1P17861 261 aa17.14■□□□□ 0.33
VSIR-201ENST00000394957 STK11IPQ8N1F8 1099 aa17.14■□□□□ 0.33
VSIR-201ENST00000394957 CWC27Q6UX04 472 aaKnown RBP17.13■□□□□ 0.33
VSIR-201ENST00000394957 PDCL2Q8N4E4 241 aa17.13■□□□□ 0.33
VSIR-201ENST00000394957 MPNDQ8N594 471 aa17.13■□□□□ 0.33
VSIR-201ENST00000394957 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.13■□□□□ 0.33
VSIR-201ENST00000394957 DEF6Q9H4E7 631 aa17.13■□□□□ 0.33
VSIR-201ENST00000394957 PER1O15534 1290 aaPredicted RBP17.13■□□□□ 0.33
VSIR-201ENST00000394957 MYD88Q99836 296 aa17.13■□□□□ 0.33
VSIR-201ENST00000394957 BANK1Q8NDB2 785 aa17.13■□□□□ 0.33
VSIR-201ENST00000394957 CCDC85AQ96PX6 553 aaPredicted RBP17.12■□□□□ 0.33
VSIR-201ENST00000394957 BRMS1Q9HCU9 246 aa17.12■□□□□ 0.33
VSIR-201ENST00000394957 FLIIQ13045 1269 aa17.12■□□□□ 0.33
VSIR-201ENST00000394957 NAT10Q9H0A0 1025 aaKnown RBP17.12■□□□□ 0.33
VSIR-201ENST00000394957 TRMT112Q9UI30 125 aaKnown RBP17.12■□□□□ 0.33
VSIR-201ENST00000394957 RFC4P35249 363 aa17.12■□□□□ 0.33
VSIR-201ENST00000394957 FKBP4Q02790 459 aaKnown RBP eCLIP17.12■□□□□ 0.33
VSIR-201ENST00000394957 CCDC70Q6NSX1 233 aa17.12■□□□□ 0.33
VSIR-201ENST00000394957 MBIPQ9NS73 344 aa17.12■□□□□ 0.33
VSIR-201ENST00000394957 STK38Q15208 465 aa17.11■□□□□ 0.33
VSIR-201ENST00000394957 OLFM4Q6UX06 510 aa17.11■□□□□ 0.33
VSIR-201ENST00000394957 PDILTQ8N807 584 aa17.11■□□□□ 0.33
VSIR-201ENST00000394957 FAM83GA6ND36 823 aa17.11■□□□□ 0.33
VSIR-201ENST00000394957 GPS2Q13227 327 aa17.11■□□□□ 0.33
VSIR-201ENST00000394957 SETQ01105 290 aaPredicted RBP17.11■□□□□ 0.33
VSIR-201ENST00000394957 MAP3K5Q99683 1374 aa17.11■□□□□ 0.33
VSIR-201ENST00000394957 MTHFSDQ2M296 383 aaKnown RBP17.11■□□□□ 0.33
VSIR-201ENST00000394957 NUTM1Q86Y26 1132 aa17.11■□□□□ 0.33
VSIR-201ENST00000394957 CWC22Q9HCG8 908 aaKnown RBP17.11■□□□□ 0.33
VSIR-201ENST00000394957 PPP1R42Q7Z4L9 355 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms