RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 TRAK2O60296 914 aa12.71□□□□□ -0.37
MTHFD2-201ENST00000394053 PHAXQ9H814 394 aaKnown RBP12.71□□□□□ -0.37
MTHFD2-201ENST00000394053 RHPN1Q8TCX5 695 aa12.71□□□□□ -0.38
MTHFD2-201ENST00000394053 RAI14Q9P0K7 980 aa12.71□□□□□ -0.38
MTHFD2-201ENST00000394053 KDM5CP41229 1560 aa12.71□□□□□ -0.38
MTHFD2-201ENST00000394053 ABCC3O15438 1527 aa12.71□□□□□ -0.38
MTHFD2-201ENST00000394053 GRM8O00222 908 aa12.7□□□□□ -0.38
MTHFD2-201ENST00000394053 TBC1D9Q6ZT07 1266 aa12.7□□□□□ -0.38
MTHFD2-201ENST00000394053 PLEKHG1Q9ULL1 1385 aa12.7□□□□□ -0.38
MTHFD2-201ENST00000394053 PRPF40AO75400 957 aaKnown RBP12.7□□□□□ -0.38
MTHFD2-201ENST00000394053 ANKRD1Q15327 319 aa12.7□□□□□ -0.38
MTHFD2-201ENST00000394053 SAMD1Q6SPF0 538 aaPredicted RBP12.7□□□□□ -0.38
MTHFD2-201ENST00000394053 G2E3Q7L622 706 aa12.7□□□□□ -0.38
MTHFD2-201ENST00000394053 ROBO2Q9HCK4 1378 aa12.7□□□□□ -0.38
MTHFD2-201ENST00000394053 LINS1Q8NG48 757 aa12.7□□□□□ -0.38
MTHFD2-201ENST00000394053 CWC22Q9HCG8 908 aaKnown RBP12.7□□□□□ -0.38
MTHFD2-201ENST00000394053 PLXNC1O60486 1568 aa12.7□□□□□ -0.38
MTHFD2-201ENST00000394053 LMTK3Q96Q04 1460 aa12.7□□□□□ -0.38
MTHFD2-201ENST00000394053 ANKRD18BA2A2Z9 1011 aa12.7□□□□□ -0.38
MTHFD2-201ENST00000394053 PDRG1Q9NUG6 133 aa12.7□□□□□ -0.38
MTHFD2-201ENST00000394053 CTNNA3Q9UI47 895 aa12.7□□□□□ -0.38
MTHFD2-201ENST00000394053 FIBPO43427 364 aa12.69□□□□□ -0.38
MTHFD2-201ENST00000394053 ATP2B1P20020 1258 aa12.69□□□□□ -0.38
MTHFD2-201ENST00000394053 CWF19L2Q2TBE0 894 aaKnown RBP12.69□□□□□ -0.38
MTHFD2-201ENST00000394053 CCDC73Q6ZRK6 1079 aa12.69□□□□□ -0.38
MTHFD2-201ENST00000394053 ALDH1L1O75891 902 aa12.69□□□□□ -0.38
MTHFD2-201ENST00000394053 PRPF40BQ6NWY9 871 aaKnown RBP12.69□□□□□ -0.38
MTHFD2-201ENST00000394053 CASTP20810 708 aaKnown RBP12.69□□□□□ -0.38
MTHFD2-201ENST00000394053 ATP8B2P98198 1209 aa12.69□□□□□ -0.38
MTHFD2-201ENST00000394053 SLC3A2P08195 630 aaKnown RBP12.68□□□□□ -0.38
MTHFD2-201ENST00000394053 TDO2P48775 406 aa12.68□□□□□ -0.38
MTHFD2-201ENST00000394053 C16orf71Q8IYS4 520 aaPredicted RBP12.68□□□□□ -0.38
MTHFD2-201ENST00000394053 CLASP1Q7Z460 1538 aa12.68□□□□□ -0.38
MTHFD2-201ENST00000394053 KRT32Q14532 448 aa12.68□□□□□ -0.38
MTHFD2-201ENST00000394053 LMBR1LQ6UX01 489 aa12.68□□□□□ -0.38
MTHFD2-201ENST00000394053 TTC22Q5TAA0 569 aa12.68□□□□□ -0.38
MTHFD2-201ENST00000394053 ZNF790Q6PG37 636 aa12.68□□□□□ -0.38
MTHFD2-201ENST00000394053 AIDAQ96BJ3 306 aa12.68□□□□□ -0.38
MTHFD2-201ENST00000394053 SNRKQ9NRH2 765 aa12.68□□□□□ -0.38
MTHFD2-201ENST00000394053 XBP1P17861 261 aa12.67□□□□□ -0.38
MTHFD2-201ENST00000394053 LARP1BQ659C4 914 aaKnown RBP12.67□□□□□ -0.38
MTHFD2-201ENST00000394053 CAVIN1Q6NZI2 390 aaKnown RBP12.67□□□□□ -0.38
MTHFD2-201ENST00000394053 KDM5AP29375 1690 aaKnown RBP12.67□□□□□ -0.38
MTHFD2-201ENST00000394053 KIF1BO60333 1816 aa12.67□□□□□ -0.38
MTHFD2-201ENST00000394053 CDC42BPBQ9Y5S2 1711 aa12.67□□□□□ -0.38
MTHFD2-201ENST00000394053 PES1O00541 588 aaKnown RBP12.67□□□□□ -0.38
MTHFD2-201ENST00000394053 ATP6V1AP38606 617 aa12.67□□□□□ -0.38
MTHFD2-201ENST00000394053 ARHGAP31Q2M1Z3 1444 aa12.67□□□□□ -0.38
MTHFD2-201ENST00000394053 PRR36Q9H6K5 1346 aa12.67□□□□□ -0.38
MTHFD2-201ENST00000394053 ZBTB7BO15156 539 aaPredicted RBP12.67□□□□□ -0.38
MTHFD2-201ENST00000394053 TPD52L1Q16890 204 aaPredicted RBP12.67□□□□□ -0.38
MTHFD2-201ENST00000394053 GLIPR1L2Q4G1C9 344 aa12.67□□□□□ -0.38
MTHFD2-201ENST00000394053 TET3O43151 1660 aa12.67□□□□□ -0.38
MTHFD2-201ENST00000394053 SDSP20132 328 aa12.66□□□□□ -0.38
MTHFD2-201ENST00000394053 CEBPZQ03701 1054 aaKnown RBP12.66□□□□□ -0.38
MTHFD2-201ENST00000394053 CEP85Q6P2H3 762 aa12.66□□□□□ -0.38
MTHFD2-201ENST00000394053 SDF4Q9BRK5 362 aa12.66□□□□□ -0.38
MTHFD2-201ENST00000394053 DDX21Q9NR30 783 aaKnown RBP eCLIP12.66□□□□□ -0.38
MTHFD2-201ENST00000394053 PDE1AP54750 535 aa12.66□□□□□ -0.38
MTHFD2-201ENST00000394053 CAVIN4Q5BKX8 364 aa12.66□□□□□ -0.38
MTHFD2-201ENST00000394053 DCTPP1Q9H773 170 aa12.66□□□□□ -0.38
MTHFD2-201ENST00000394053 IQGAP3Q86VI3 1631 aa12.66□□□□□ -0.38
MTHFD2-201ENST00000394053 BLMP54132 1417 aaPredicted RBP12.66□□□□□ -0.38
MTHFD2-201ENST00000394053 EVI5LQ96CN4 794 aa12.66□□□□□ -0.38
MTHFD2-201ENST00000394053 PA2G4Q9UQ80 394 aaKnown RBP12.66□□□□□ -0.38
MTHFD2-201ENST00000394053 ZMYM4Q5VZL5 1548 aa12.65□□□□□ -0.38
MTHFD2-201ENST00000394053 GOLIM4O00461 696 aa12.65□□□□□ -0.38
MTHFD2-201ENST00000394053 SMC5Q8IY18 1101 aa12.65□□□□□ -0.38
MTHFD2-201ENST00000394053 CTDP1Q9Y5B0 961 aaPredicted RBP12.65□□□□□ -0.38
MTHFD2-201ENST00000394053 WDR33Q9C0J8 1336 aaKnown RBP12.65□□□□□ -0.38
MTHFD2-201ENST00000394053 SASS6Q6UVJ0 657 aa12.65□□□□□ -0.38
MTHFD2-201ENST00000394053 TBC1D2Q9BYX2 928 aa12.65□□□□□ -0.38
MTHFD2-201ENST00000394053 U3KPZ7 1027 aaPredicted RBP12.65□□□□□ -0.38
MTHFD2-201ENST00000394053 TMEM94Q12767 1356 aa12.65□□□□□ -0.38
MTHFD2-201ENST00000394053 IMMTQ16891 758 aaKnown RBP12.65□□□□□ -0.38
MTHFD2-201ENST00000394053 RNF214Q8ND24 703 aa12.65□□□□□ -0.38
MTHFD2-201ENST00000394053 MBD3O95983 291 aa12.64□□□□□ -0.39
MTHFD2-201ENST00000394053 PCDH11XQ9BZA7 1347 aa12.64□□□□□ -0.39
MTHFD2-201ENST00000394053 PCDH11YQ9BZA8 1340 aa12.64□□□□□ -0.39
MTHFD2-201ENST00000394053 INSRP06213 1382 aa12.64□□□□□ -0.39
MTHFD2-201ENST00000394053 NUP133Q8WUM0 1156 aa12.64□□□□□ -0.39
MTHFD2-201ENST00000394053 ZSCAN31Q96LW9 406 aaPredicted RBP12.64□□□□□ -0.39
MTHFD2-201ENST00000394053 ANKIB1Q9P2G1 1089 aa12.64□□□□□ -0.39
MTHFD2-201ENST00000394053 NLRP1Q9C000 1473 aa12.64□□□□□ -0.39
MTHFD2-201ENST00000394053 BRMS1Q9HCU9 246 aa12.64□□□□□ -0.39
MTHFD2-201ENST00000394053 IKQ13123 557 aaPredicted RBP12.64□□□□□ -0.39
MTHFD2-201ENST00000394053 AK7Q96M32 723 aa12.64□□□□□ -0.39
MTHFD2-201ENST00000394053 CIZ1Q9ULV3 898 aaPredicted RBP12.64□□□□□ -0.39
MTHFD2-201ENST00000394053 SLC5A1P13866 664 aa12.63□□□□□ -0.39
MTHFD2-201ENST00000394053 HMGB2P26583 209 aaKnown RBP12.63□□□□□ -0.39
MTHFD2-201ENST00000394053 BABAM1Q9NWV8 329 aa12.63□□□□□ -0.39
MTHFD2-201ENST00000394053 ATP2B2Q01814 1243 aa12.63□□□□□ -0.39
MTHFD2-201ENST00000394053 MAP3K12Q12852 859 aa12.63□□□□□ -0.39
MTHFD2-201ENST00000394053 NCBP3Q53F19 620 aaKnown RBP12.63□□□□□ -0.39
MTHFD2-201ENST00000394053 IL17REQ8NFR9 667 aa12.63□□□□□ -0.39
MTHFD2-201ENST00000394053 TBC1D32Q96NH3 1257 aa12.63□□□□□ -0.39
MTHFD2-201ENST00000394053 UBAC1Q9BSL1 405 aa12.63□□□□□ -0.39
MTHFD2-201ENST00000394053 SOS1Q07889 1333 aaPredicted RBP12.63□□□□□ -0.39
MTHFD2-201ENST00000394053 CCDC69A6NI79 296 aa12.62□□□□□ -0.39
MTHFD2-201ENST00000394053 TRIM22Q8IYM9 498 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms