RNA–Protein interactions for RNA: ENST00000393966.1

PLEKHG4-203, Transcript of pleckstrin homology and RhoGEF domain containing G4, humanhuman

TSL 1 (best)

Gene PLEKHG4, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHG4-203ENST00000393966 DDX21Q9NR30 783 aaKnown RBP eCLIP17.1■□□□□ 0.33
PLEKHG4-203ENST00000393966 USP35Q9P2H5 1018 aa17.1■□□□□ 0.33
PLEKHG4-203ENST00000393966 GLI3P10071 1580 aa17.1■□□□□ 0.33
PLEKHG4-203ENST00000393966 COL22A1Q8NFW1 1626 aaPredicted RBP17.1■□□□□ 0.33
PLEKHG4-203ENST00000393966 PNMA6EA0A0J9YXQ4 647 aa17.09■□□□□ 0.33
PLEKHG4-203ENST00000393966 HYPKQ9NX55 129 aa17.09■□□□□ 0.33
PLEKHG4-203ENST00000393966 SMARCA5O60264 1052 aaPredicted RBP17.09■□□□□ 0.33
PLEKHG4-203ENST00000393966 UBTFL1P0CB47 393 aaPredicted RBP17.09■□□□□ 0.33
PLEKHG4-203ENST00000393966 NKX1-1Q15270 411 aaPredicted RBP17.09■□□□□ 0.33
PLEKHG4-203ENST00000393966 C16orf71Q8IYS4 520 aaPredicted RBP17.09■□□□□ 0.33
PLEKHG4-203ENST00000393966 TTC5Q8N0Z6 440 aa17.09■□□□□ 0.33
PLEKHG4-203ENST00000393966 MAP3K2Q9Y2U5 619 aa17.09■□□□□ 0.33
PLEKHG4-203ENST00000393966 COL16A1Q07092 1604 aaPredicted RBP17.09■□□□□ 0.33
PLEKHG4-203ENST00000393966 APBB1O00213 710 aa17.08■□□□□ 0.33
PLEKHG4-203ENST00000393966 ATP8B2P98198 1209 aa17.08■□□□□ 0.33
PLEKHG4-203ENST00000393966 BMP2KLQ5H9B9 411 aa17.08■□□□□ 0.33
PLEKHG4-203ENST00000393966 PLEKHM2Q8IWE5 1019 aa17.08■□□□□ 0.33
PLEKHG4-203ENST00000393966 DDX54Q8TDD1 881 aaKnown RBP17.08■□□□□ 0.33
PLEKHG4-203ENST00000393966 NBPF7P0C2Y1 421 aaPredicted RBP17.08■□□□□ 0.32
PLEKHG4-203ENST00000393966 KSR2Q6VAB6 950 aa17.08■□□□□ 0.32
PLEKHG4-203ENST00000393966 OTUD7AQ8TE49 926 aaPredicted RBP17.08■□□□□ 0.32
PLEKHG4-203ENST00000393966 USP16Q9Y5T5 823 aa17.08■□□□□ 0.32
PLEKHG4-203ENST00000393966 COL14A1Q05707 1796 aaKnown RBP17.07■□□□□ 0.32
PLEKHG4-203ENST00000393966 SNRPA1P09661 255 aaKnown RBP17.07■□□□□ 0.32
PLEKHG4-203ENST00000393966 FMNL2Q96PY5 1086 aa17.07■□□□□ 0.32
PLEKHG4-203ENST00000393966 ERVV-2B6SEH9 535 aa17.06■□□□□ 0.32
PLEKHG4-203ENST00000393966 LRP10Q7Z4F1 713 aa17.06■□□□□ 0.32
PLEKHG4-203ENST00000393966 EXOC6BQ9Y2D4 811 aa17.06■□□□□ 0.32
PLEKHG4-203ENST00000393966 MYL6BP14649 208 aa17.05■□□□□ 0.32
PLEKHG4-203ENST00000393966 AIMP1Q12904 312 aaKnown RBP17.05■□□□□ 0.32
PLEKHG4-203ENST00000393966 GSPT1P15170 499 aaKnown RBP17.05■□□□□ 0.32
PLEKHG4-203ENST00000393966 PIP4K2AP48426 406 aaPredicted RBP17.04■□□□□ 0.32
PLEKHG4-203ENST00000393966 TBC1D32Q96NH3 1257 aa17.04■□□□□ 0.32
PLEKHG4-203ENST00000393966 TOGARAM1Q9Y4F4 1720 aa17.04■□□□□ 0.32
PLEKHG4-203ENST00000393966 CWF19L2Q2TBE0 894 aaKnown RBP17.04■□□□□ 0.32
PLEKHG4-203ENST00000393966 PHLPP1O60346 1717 aa17.03■□□□□ 0.32
PLEKHG4-203ENST00000393966 DISP2A7MBM2 1401 aa17.03■□□□□ 0.32
PLEKHG4-203ENST00000393966 SLC4A3P48751 1232 aa17.03■□□□□ 0.32
PLEKHG4-203ENST00000393966 SSH3Q8TE77 659 aa17.03■□□□□ 0.32
PLEKHG4-203ENST00000393966 XAGE3Q8WTP9 111 aa17.03■□□□□ 0.32
PLEKHG4-203ENST00000393966 UBR2Q8IWV8 1755 aa17.03■□□□□ 0.32
PLEKHG4-203ENST00000393966 PAPPAQ13219 1627 aa17.03■□□□□ 0.32
PLEKHG4-203ENST00000393966 ALDH1L1O75891 902 aa17.02■□□□□ 0.32
PLEKHG4-203ENST00000393966 DDX58O95786 925 aaKnown RBP17.02■□□□□ 0.32
PLEKHG4-203ENST00000393966 MFAP1P55081 439 aaKnown RBP17.02■□□□□ 0.32
PLEKHG4-203ENST00000393966 PPP1R42Q7Z4L9 355 aa17.02■□□□□ 0.32
PLEKHG4-203ENST00000393966 UPF2Q9HAU5 1272 aaKnown RBP17.02■□□□□ 0.32
PLEKHG4-203ENST00000393966 KCPQ6ZWJ8 1503 aa17.02■□□□□ 0.32
PLEKHG4-203ENST00000393966 IBTKQ9P2D0 1353 aaPredicted RBP17.02■□□□□ 0.32
PLEKHG4-203ENST00000393966 COPS6Q7L5N1 327 aa17.02■□□□□ 0.31
PLEKHG4-203ENST00000393966 LAMB4A4D0S4 1761 aa17.02■□□□□ 0.31
PLEKHG4-203ENST00000393966 POLA2Q14181 598 aa17.01■□□□□ 0.31
PLEKHG4-203ENST00000393966 TTC22Q5TAA0 569 aa17.01■□□□□ 0.31
PLEKHG4-203ENST00000393966 LINS1Q8NG48 757 aa17.01■□□□□ 0.31
PLEKHG4-203ENST00000393966 IGKV5-2P06315 115 aa17■□□□□ 0.31
PLEKHG4-203ENST00000393966 TNS2Q63HR2 1409 aa17■□□□□ 0.31
PLEKHG4-203ENST00000393966 ADAMTS2O95450 1211 aa16.99■□□□□ 0.31
PLEKHG4-203ENST00000393966 PIP4K2BP78356 416 aa16.99■□□□□ 0.31
PLEKHG4-203ENST00000393966 RIC3Q7Z5B4 369 aa16.99■□□□□ 0.31
PLEKHG4-203ENST00000393966 C9orf78Q9NZ63 289 aaPredicted RBP16.99■□□□□ 0.31
PLEKHG4-203ENST00000393966 DAXXQ9UER7 740 aaPredicted RBP16.99■□□□□ 0.31
PLEKHG4-203ENST00000393966 SRGAP3O43295 1099 aa16.99■□□□□ 0.31
PLEKHG4-203ENST00000393966 TBC1D9Q6ZT07 1266 aa16.99■□□□□ 0.31
PLEKHG4-203ENST00000393966 LRRCC1Q9C099 1032 aa16.99■□□□□ 0.31
PLEKHG4-203ENST00000393966 PLCH1Q4KWH8 1693 aa16.98■□□□□ 0.31
PLEKHG4-203ENST00000393966 NBPF26B4DH59 902 aa16.98■□□□□ 0.31
PLEKHG4-203ENST00000393966 PTCD1O75127 700 aaKnown RBP16.98■□□□□ 0.31
PLEKHG4-203ENST00000393966 NBPF14Q5TI25 921 aa16.98■□□□□ 0.31
PLEKHG4-203ENST00000393966 NBPF10Q6P3W6 841 aaKnown RBP16.98■□□□□ 0.31
PLEKHG4-203ENST00000393966 NBPF15Q8N660 670 aa16.98■□□□□ 0.31
PLEKHG4-203ENST00000393966 SALL3Q9BXA9 1300 aa16.98■□□□□ 0.31
PLEKHG4-203ENST00000393966 GRM8O00222 908 aa16.97■□□□□ 0.31
PLEKHG4-203ENST00000393966 ANKRD13DQ6ZTN6 518 aa16.97■□□□□ 0.31
PLEKHG4-203ENST00000393966 METTL22Q9BUU2 404 aaPredicted RBP16.97■□□□□ 0.31
PLEKHG4-203ENST00000393966 C22orf23Q9BZE7 217 aa16.97■□□□□ 0.31
PLEKHG4-203ENST00000393966 UTYO14607 1347 aa16.97■□□□□ 0.31
PLEKHG4-203ENST00000393966 PDE1AP54750 535 aa16.96■□□□□ 0.31
PLEKHG4-203ENST00000393966 NFKBIBQ15653 356 aa16.96■□□□□ 0.31
PLEKHG4-203ENST00000393966 KAZALD1Q96I82 304 aa16.96■□□□□ 0.31
PLEKHG4-203ENST00000393966 TMOD3Q9NYL9 352 aa16.96■□□□□ 0.31
PLEKHG4-203ENST00000393966 NEURL1BA8MQ27 555 aa16.96■□□□□ 0.31
PLEKHG4-203ENST00000393966 TOM1O60784 492 aa16.96■□□□□ 0.31
PLEKHG4-203ENST00000393966 CDC45O75419 566 aa16.96■□□□□ 0.31
PLEKHG4-203ENST00000393966 MTX1Q13505 466 aa16.96■□□□□ 0.31
PLEKHG4-203ENST00000393966 MYD88Q99836 296 aa16.96■□□□□ 0.31
PLEKHG4-203ENST00000393966 OSBPL3Q9H4L5 887 aa16.96■□□□□ 0.31
PLEKHG4-203ENST00000393966 SURF6O75683 361 aaKnown RBP16.95■□□□□ 0.3
PLEKHG4-203ENST00000393966 TSHZ3Q63HK5 1081 aa16.95■□□□□ 0.3
PLEKHG4-203ENST00000393966 PIGBQ92521 554 aa16.95■□□□□ 0.3
PLEKHG4-203ENST00000393966 SUCLG2Q96I99 432 aa16.95■□□□□ 0.3
PLEKHG4-203ENST00000393966 NRAPQ86VF7 1730 aa16.95■□□□□ 0.3
PLEKHG4-203ENST00000393966 SDSP20132 328 aa16.95■□□□□ 0.3
PLEKHG4-203ENST00000393966 WNK3Q9BYP7 1800 aa16.95■□□□□ 0.3
PLEKHG4-203ENST00000393966 ERBB4Q15303 1308 aa16.95■□□□□ 0.3
PLEKHG4-203ENST00000393966 NUTM2BA6NNL0 878 aaPredicted RBP16.94■□□□□ 0.3
PLEKHG4-203ENST00000393966 NUTM2EB1AL46 878 aaPredicted RBP16.94■□□□□ 0.3
PLEKHG4-203ENST00000393966 A1BGP04217 495 aa16.94■□□□□ 0.3
PLEKHG4-203ENST00000393966 NEXNQ0ZGT2 675 aa16.94■□□□□ 0.3
PLEKHG4-203ENST00000393966 NUTM2AQ8IVF1 878 aaPredicted RBP16.94■□□□□ 0.3
PLEKHG4-203ENST00000393966 ASAP1Q9ULH1 1129 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 284.7 ms