RNA–Protein interactions for RNA: ENST00000393958.6

PC-202, Transcript of pyruvate carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PC, Length 4,005 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PC-202ENST00000393958 CCDC39Q9UFE4 941 aa12.15□□□□□ -0.46
PC-202ENST00000393958 CFAP74Q9C0B2 1584 aa12.15□□□□□ -0.46
PC-202ENST00000393958 A2ML1A8K2U0 1454 aa12.15□□□□□ -0.46
PC-202ENST00000393958 IL25Q9H293 177 aa12.15□□□□□ -0.47
PC-202ENST00000393958 GIMAP6Q6P9H5 292 aa12.14□□□□□ -0.47
PC-202ENST00000393958 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.14□□□□□ -0.47
PC-202ENST00000393958 TCEANC2Q96MN5 208 aa12.14□□□□□ -0.47
PC-202ENST00000393958 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.14□□□□□ -0.47
PC-202ENST00000393958 AFF2P51816 1311 aa12.14□□□□□ -0.47
PC-202ENST00000393958 SYAP1Q96A49 352 aaPredicted RBP12.13□□□□□ -0.47
PC-202ENST00000393958 ROBO2Q9HCK4 1378 aa12.13□□□□□ -0.47
PC-202ENST00000393958 CHL1O00533 1208 aa12.13□□□□□ -0.47
PC-202ENST00000393958 MBD3O95983 291 aa12.13□□□□□ -0.47
PC-202ENST00000393958 CYP2E1P05181 493 aaPredicted RBP12.13□□□□□ -0.47
PC-202ENST00000393958 FLIIQ13045 1269 aa12.13□□□□□ -0.47
PC-202ENST00000393958 CAMK4Q16566 473 aa12.13□□□□□ -0.47
PC-202ENST00000393958 TTC21BQ7Z4L5 1316 aa12.13□□□□□ -0.47
PC-202ENST00000393958 CPSF1Q10570 1443 aaKnown RBP12.13□□□□□ -0.47
PC-202ENST00000393958 UBTFL1P0CB47 393 aaPredicted RBP12.13□□□□□ -0.47
PC-202ENST00000393958 CHMLP26374 656 aa12.13□□□□□ -0.47
PC-202ENST00000393958 BRPF1P55201 1214 aaPredicted RBP12.13□□□□□ -0.47
PC-202ENST00000393958 FOSBP53539 338 aa12.12□□□□□ -0.47
PC-202ENST00000393958 FAM173BQ6P4H8 233 aa12.12□□□□□ -0.47
PC-202ENST00000393958 CCDC83Q8IWF9 413 aa12.12□□□□□ -0.47
PC-202ENST00000393958 PTCH1Q13635 1447 aa12.12□□□□□ -0.47
PC-202ENST00000393958 RICTORQ6R327 1708 aa12.12□□□□□ -0.47
PC-202ENST00000393958 PHAXQ9H814 394 aaKnown RBP12.12□□□□□ -0.47
PC-202ENST00000393958 ZHX1Q9UKY1 873 aaPredicted RBP12.12□□□□□ -0.47
PC-202ENST00000393958 MAP3K19Q56UN5 1328 aa12.12□□□□□ -0.47
PC-202ENST00000393958 PPFIA3O75145 1194 aa12.12□□□□□ -0.47
PC-202ENST00000393958 DRC7Q8IY82 874 aa12.12□□□□□ -0.47
PC-202ENST00000393958 SRGAP3O43295 1099 aa12.11□□□□□ -0.47
PC-202ENST00000393958 ADCY5O95622 1261 aa12.11□□□□□ -0.47
PC-202ENST00000393958 SMC3Q9UQE7 1217 aa12.11□□□□□ -0.47
PC-202ENST00000393958 EDC4Q6P2E9 1401 aaKnown RBP12.11□□□□□ -0.47
PC-202ENST00000393958 NECAB1Q8N987 351 aa12.11□□□□□ -0.47
PC-202ENST00000393958 CCT4P50991 539 aaKnown RBP12.11□□□□□ -0.47
PC-202ENST00000393958 POTEAQ6S8J7 498 aa12.11□□□□□ -0.47
PC-202ENST00000393958 SRCIN1Q9C0H9 1055 aa12.11□□□□□ -0.47
PC-202ENST00000393958 IGSF3O75054 1194 aa12.1□□□□□ -0.47
PC-202ENST00000393958 CBX1P83916 185 aa12.1□□□□□ -0.47
PC-202ENST00000393958 TRPC5Q9UL62 973 aaPredicted RBP12.1□□□□□ -0.47
PC-202ENST00000393958 CASTP20810 708 aaKnown RBP12.1□□□□□ -0.47
PC-202ENST00000393958 CABLES1Q8TDN4 633 aa12.1□□□□□ -0.47
PC-202ENST00000393958 FBXW7Q969H0 707 aa12.1□□□□□ -0.47
PC-202ENST00000393958 BRD1O95696 1058 aa12.1□□□□□ -0.47
PC-202ENST00000393958 STK3Q13188 491 aa12.1□□□□□ -0.47
PC-202ENST00000393958 ZC3H6P61129 1189 aaKnown RBP12.09□□□□□ -0.47
PC-202ENST00000393958 PPP1R42Q7Z4L9 355 aa12.09□□□□□ -0.47
PC-202ENST00000393958 GOLGA6L4A6NEF3 574 aa12.09□□□□□ -0.47
PC-202ENST00000393958 NLRP6P59044 892 aa12.09□□□□□ -0.47
PC-202ENST00000393958 HDGFL1Q5TGJ6 251 aa12.09□□□□□ -0.47
PC-202ENST00000393958 ORAI2Q96SN7 254 aa12.09□□□□□ -0.47
PC-202ENST00000393958 SPDYE4A6NLX3 237 aa12.09□□□□□ -0.47
PC-202ENST00000393958 BAG6P46379 1132 aa12.09□□□□□ -0.47
PC-202ENST00000393958 RBM6P78332 1123 aaKnown RBP12.09□□□□□ -0.47
PC-202ENST00000393958 CSPP1Q1MSJ5 1256 aa12.09□□□□□ -0.47
PC-202ENST00000393958 EYA1Q99502 592 aa12.09□□□□□ -0.47
PC-202ENST00000393958 NAP1L2Q9ULW6 460 aaPredicted RBP12.09□□□□□ -0.47
PC-202ENST00000393958 TBX22Q9Y458 520 aa12.09□□□□□ -0.47
PC-202ENST00000393958 DNM1Q05193 864 aaKnown RBP12.08□□□□□ -0.47
PC-202ENST00000393958 RASEFQ8IZ41 740 aa12.08□□□□□ -0.47
PC-202ENST00000393958 SYTL4Q96C24 671 aaPredicted RBP12.08□□□□□ -0.47
PC-202ENST00000393958 PTPRCP08575 1304 aa12.08□□□□□ -0.48
PC-202ENST00000393958 GNAI3P08754 354 aa12.08□□□□□ -0.48
PC-202ENST00000393958 DIAPH3Q9NSV4 1193 aa12.08□□□□□ -0.48
PC-202ENST00000393958 WDR33Q9C0J8 1336 aaKnown RBP12.08□□□□□ -0.48
PC-202ENST00000393958 AK2P54819 239 aa12.08□□□□□ -0.48
PC-202ENST00000393958 PRPF40BQ6NWY9 871 aaKnown RBP12.08□□□□□ -0.48
PC-202ENST00000393958 CKAP2LQ8IYA6 745 aa12.08□□□□□ -0.48
PC-202ENST00000393958 JAKMIP1Q96N16 626 aaKnown RBP12.08□□□□□ -0.48
PC-202ENST00000393958 PIK3R4Q99570 1358 aa12.08□□□□□ -0.48
PC-202ENST00000393958 JCADQ9P266 1359 aa12.08□□□□□ -0.48
PC-202ENST00000393958 ATP10DQ9P241 1426 aa12.08□□□□□ -0.48
PC-202ENST00000393958 KNDC1Q76NI1 1749 aa12.08□□□□□ -0.48
PC-202ENST00000393958 DLG5Q8TDM6 1919 aa12.08□□□□□ -0.48
PC-202ENST00000393958 PHF14O94880 888 aa12.08□□□□□ -0.48
PC-202ENST00000393958 CEBPZQ03701 1054 aaKnown RBP12.08□□□□□ -0.48
PC-202ENST00000393958 CCDC30Q5VVM6 783 aa12.08□□□□□ -0.48
PC-202ENST00000393958 CLEC17AQ6ZS10 378 aa12.08□□□□□ -0.48
PC-202ENST00000393958 TFIP11Q9UBB9 837 aaKnown RBP12.08□□□□□ -0.48
PC-202ENST00000393958 CHAF1AQ13111 956 aaPredicted RBP12.07□□□□□ -0.48
PC-202ENST00000393958 PDLIM2Q96JY6 352 aa12.07□□□□□ -0.48
PC-202ENST00000393958 SIL1Q9H173 461 aa12.07□□□□□ -0.48
PC-202ENST00000393958 CLTCQ00610 1675 aaKnown RBP12.07□□□□□ -0.48
PC-202ENST00000393958 KIF20BQ96Q89 1820 aa12.07□□□□□ -0.48
PC-202ENST00000393958 PSDA5PKW4 1024 aaPredicted RBP12.07□□□□□ -0.48
PC-202ENST00000393958 AIMP1Q12904 312 aaKnown RBP12.07□□□□□ -0.48
PC-202ENST00000393958 TAF7Q15545 349 aaPredicted RBP12.07□□□□□ -0.48
PC-202ENST00000393958 SASS6Q6UVJ0 657 aa12.07□□□□□ -0.48
PC-202ENST00000393958 RGS12O14924 1447 aa12.07□□□□□ -0.48
PC-202ENST00000393958 ATP7BP35670 1465 aa12.07□□□□□ -0.48
PC-202ENST00000393958 TMEM2Q9UHN6 1383 aa12.07□□□□□ -0.48
PC-202ENST00000393958 PA2G4Q9UQ80 394 aaKnown RBP12.07□□□□□ -0.48
PC-202ENST00000393958 ZNF500O60304 480 aaPredicted RBP12.06□□□□□ -0.48
PC-202ENST00000393958 SYT1P21579 422 aa12.06□□□□□ -0.48
PC-202ENST00000393958 FGD1P98174 961 aa12.06□□□□□ -0.48
PC-202ENST00000393958 NPHP3Q7Z494 1330 aa12.06□□□□□ -0.48
PC-202ENST00000393958 NBPF7P0C2Y1 421 aaPredicted RBP12.06□□□□□ -0.48
PC-202ENST00000393958 MCM2P49736 904 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms