RNA–Protein interactions for RNA: ENST00000393883.6

ZNF559-202, Transcript of zinc finger protein 559, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF559, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-202ENST00000393883 ABCC10Q5T3U5 1492 aa17.11■□□□□ 0.33
ZNF559-202ENST00000393883 RIMS2Q9UQ26 1411 aa17.11■□□□□ 0.33
ZNF559-202ENST00000393883 ZNF622Q969S3 477 aaKnown RBP eCLIP17.11■□□□□ 0.33
ZNF559-202ENST00000393883 TANGO6Q9C0B7 1094 aa17.11■□□□□ 0.33
ZNF559-202ENST00000393883 MINDY4BA8MYZ0 360 aa17.11■□□□□ 0.33
ZNF559-202ENST00000393883 ERLIN2O94905 339 aa17.11■□□□□ 0.33
ZNF559-202ENST00000393883 CCDC192P0DO97 292 aa17.11■□□□□ 0.33
ZNF559-202ENST00000393883 MATR3P43243 847 aaKnown RBP eCLIP17.11■□□□□ 0.33
ZNF559-202ENST00000393883 MIS18AQ9NYP9 233 aa17.11■□□□□ 0.33
ZNF559-202ENST00000393883 TMEM57Q8N5G2 664 aa17.1■□□□□ 0.33
ZNF559-202ENST00000393883 K7ELQ4 463 aaPredicted RBP17.1■□□□□ 0.33
ZNF559-202ENST00000393883 KIF20AO95235 890 aa17.1■□□□□ 0.33
ZNF559-202ENST00000393883 CCDC96Q2M329 555 aa17.1■□□□□ 0.33
ZNF559-202ENST00000393883 IL16Q14005 1332 aa17.1■□□□□ 0.33
ZNF559-202ENST00000393883 MAP4K4O95819 1239 aaPredicted RBP17.1■□□□□ 0.33
ZNF559-202ENST00000393883 TSPY26PQ9H489 355 aa17.1■□□□□ 0.33
ZNF559-202ENST00000393883 CCDC178Q5BJE1 867 aa17.1■□□□□ 0.33
ZNF559-202ENST00000393883 LDHAL6AQ6ZMR3 332 aa17.1■□□□□ 0.33
ZNF559-202ENST00000393883 NYXQ9GZU5 481 aa17.1■□□□□ 0.33
ZNF559-202ENST00000393883 PUS7Q96PZ0 661 aaKnown RBP17.09■□□□□ 0.33
ZNF559-202ENST00000393883 FEZ1Q99689 392 aa17.09■□□□□ 0.33
ZNF559-202ENST00000393883 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.09■□□□□ 0.33
ZNF559-202ENST00000393883 SCLT1Q96NL6 688 aa17.09■□□□□ 0.33
ZNF559-202ENST00000393883 DEF6Q9H4E7 631 aa17.09■□□□□ 0.33
ZNF559-202ENST00000393883 ZBTB3Q9H5J0 574 aa17.09■□□□□ 0.33
ZNF559-202ENST00000393883 MRE11P49959 708 aa17.09■□□□□ 0.33
ZNF559-202ENST00000393883 FLIIQ13045 1269 aa17.09■□□□□ 0.33
ZNF559-202ENST00000393883 SETDB2Q96T68 719 aa17.09■□□□□ 0.33
ZNF559-202ENST00000393883 SPINK5Q9NQ38 1064 aaPredicted RBP17.09■□□□□ 0.33
ZNF559-202ENST00000393883 TMEM266Q2M3C6 531 aa17.08■□□□□ 0.33
ZNF559-202ENST00000393883 EXOC6BQ9Y2D4 811 aa17.08■□□□□ 0.33
ZNF559-202ENST00000393883 SERPINC1P01008 464 aa17.08■□□□□ 0.32
ZNF559-202ENST00000393883 PDE4BQ07343 736 aa17.08■□□□□ 0.32
ZNF559-202ENST00000393883 GPATCH8Q9UKJ3 1502 aaKnown RBP17.08■□□□□ 0.32
ZNF559-202ENST00000393883 KIF5BP33176 963 aa17.08■□□□□ 0.32
ZNF559-202ENST00000393883 TNMDQ9H2S6 317 aa17.08■□□□□ 0.32
ZNF559-202ENST00000393883 ZNF213O14771 459 aa17.07■□□□□ 0.32
ZNF559-202ENST00000393883 GPTP24298 496 aa17.07■□□□□ 0.32
ZNF559-202ENST00000393883 CEBPZQ03701 1054 aaKnown RBP17.07■□□□□ 0.32
ZNF559-202ENST00000393883 CIZ1Q9ULV3 898 aaPredicted RBP17.07■□□□□ 0.32
ZNF559-202ENST00000393883 WDR78Q5VTH9 848 aa17.07■□□□□ 0.32
ZNF559-202ENST00000393883 NUTM1Q86Y26 1132 aa17.07■□□□□ 0.32
ZNF559-202ENST00000393883 C8orf37Q96NL8 207 aa17.07■□□□□ 0.32
ZNF559-202ENST00000393883 RAPGEF6Q8TEU7 1601 aa17.07■□□□□ 0.32
ZNF559-202ENST00000393883 BRPF1P55201 1214 aaPredicted RBP17.07■□□□□ 0.32
ZNF559-202ENST00000393883 CHRNA2Q15822 529 aa17.07■□□□□ 0.32
ZNF559-202ENST00000393883 NLRP3Q96P20 1036 aa17.07■□□□□ 0.32
ZNF559-202ENST00000393883 ANKRD18AQ8IVF6 992 aa17.07■□□□□ 0.32
ZNF559-202ENST00000393883 SH2B1Q9NRF2 756 aaPredicted RBP17.07■□□□□ 0.32
ZNF559-202ENST00000393883 DCTN1Q14203 1278 aa17.06■□□□□ 0.32
ZNF559-202ENST00000393883 SPATA32Q96LK8 384 aa17.06■□□□□ 0.32
ZNF559-202ENST00000393883 THUMPD2Q9BTF0 503 aaKnown RBP17.06■□□□□ 0.32
ZNF559-202ENST00000393883 IL2RBP14784 551 aa17.06■□□□□ 0.32
ZNF559-202ENST00000393883 CATIPQ7Z7H3 387 aa17.06■□□□□ 0.32
ZNF559-202ENST00000393883 NF2P35240 595 aa17.06■□□□□ 0.32
ZNF559-202ENST00000393883 HMGN5P82970 282 aaKnown RBP17.06■□□□□ 0.32
ZNF559-202ENST00000393883 RANBP6O60518 1105 aaKnown RBP17.05■□□□□ 0.32
ZNF559-202ENST00000393883 BAG4O95429 457 aaKnown RBP17.05■□□□□ 0.32
ZNF559-202ENST00000393883 OGFOD1Q8N543 542 aa17.05■□□□□ 0.32
ZNF559-202ENST00000393883 NUP160Q12769 1436 aa17.05■□□□□ 0.32
ZNF559-202ENST00000393883 LMTK3Q96Q04 1460 aa17.05■□□□□ 0.32
ZNF559-202ENST00000393883 PRPF40AO75400 957 aaKnown RBP17.05■□□□□ 0.32
ZNF559-202ENST00000393883 CETN2P41208 172 aa17.05■□□□□ 0.32
ZNF559-202ENST00000393883 NASPP49321 788 aaPredicted RBP17.05■□□□□ 0.32
ZNF559-202ENST00000393883 BOLA2Q9H3K6 86 aa17.05■□□□□ 0.32
ZNF559-202ENST00000393883 ATP10BO94823 1461 aa17.05■□□□□ 0.32
ZNF559-202ENST00000393883 ATP6V1AP38606 617 aa17.05■□□□□ 0.32
ZNF559-202ENST00000393883 AKAP4Q5JQC9 854 aa17.05■□□□□ 0.32
ZNF559-202ENST00000393883 MAP3K2Q9Y2U5 619 aa17.05■□□□□ 0.32
ZNF559-202ENST00000393883 SLC12A7Q9Y666 1083 aa17.05■□□□□ 0.32
ZNF559-202ENST00000393883 NEBLO76041 1014 aa17.04■□□□□ 0.32
ZNF559-202ENST00000393883 ANKRD13DQ6ZTN6 518 aa17.04■□□□□ 0.32
ZNF559-202ENST00000393883 SSH1Q8WYL5 1049 aa17.04■□□□□ 0.32
ZNF559-202ENST00000393883 EVI5LQ96CN4 794 aa17.04■□□□□ 0.32
ZNF559-202ENST00000393883 SMTNL1A8MU46 457 aa17.04■□□□□ 0.32
ZNF559-202ENST00000393883 CRNKL1Q9BZJ0 848 aaKnown RBP17.04■□□□□ 0.32
ZNF559-202ENST00000393883 FAM43AQ8N2R8 423 aa17.04■□□□□ 0.32
ZNF559-202ENST00000393883 ZNF219Q9P2Y4 722 aaPredicted RBP17.04■□□□□ 0.32
ZNF559-202ENST00000393883 BIVM-ERCC5R4GMW8 1640 aa17.04■□□□□ 0.32
ZNF559-202ENST00000393883 FGFR1OPO95684 399 aaKnown RBP17.04■□□□□ 0.32
ZNF559-202ENST00000393883 NOM1Q5C9Z4 860 aaKnown RBP17.03■□□□□ 0.32
ZNF559-202ENST00000393883 TRPM2O94759 1503 aa17.03■□□□□ 0.32
ZNF559-202ENST00000393883 NKTRP30414 1462 aaKnown RBP17.03■□□□□ 0.32
ZNF559-202ENST00000393883 RARSP54136 660 aaKnown RBP17.03■□□□□ 0.32
ZNF559-202ENST00000393883 TSG101Q99816 390 aa17.03■□□□□ 0.32
ZNF559-202ENST00000393883 ECHDC1Q9NTX5 307 aa17.03■□□□□ 0.32
ZNF559-202ENST00000393883 RPRD2Q5VT52 1461 aaKnown RBP17.03■□□□□ 0.32
ZNF559-202ENST00000393883 ITSN2Q9NZM3 1697 aa17.03■□□□□ 0.32
ZNF559-202ENST00000393883 CASTP20810 708 aaKnown RBP17.03■□□□□ 0.32
ZNF559-202ENST00000393883 CAVIN1Q6NZI2 390 aaKnown RBP17.03■□□□□ 0.32
ZNF559-202ENST00000393883 TMEM87AQ8NBN3 555 aa17.03■□□□□ 0.32
ZNF559-202ENST00000393883 TBX22Q9Y458 520 aa17.03■□□□□ 0.32
ZNF559-202ENST00000393883 CCDC194A0A1B0GVG4 234 aa17.02■□□□□ 0.32
ZNF559-202ENST00000393883 NFKBIBQ15653 356 aa17.02■□□□□ 0.32
ZNF559-202ENST00000393883 ZRSR2Q15696 482 aaKnown RBP17.02■□□□□ 0.32
ZNF559-202ENST00000393883 LRRFIP2Q9Y608 721 aaKnown RBP17.02■□□□□ 0.32
ZNF559-202ENST00000393883 PARP3Q9Y6F1 533 aa17.02■□□□□ 0.32
ZNF559-202ENST00000393883 B4DLN1 442 aa17.02■□□□□ 0.31
ZNF559-202ENST00000393883 MRPL12P52815 198 aaKnown RBP17.02■□□□□ 0.31
ZNF559-202ENST00000393883 PLEKHH1Q9ULM0 1364 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms