RNA–Protein interactions for RNA: ENST00000391901.7

ZNF541-203, Transcript of zinc finger protein 541, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF541, Length 4,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-203ENST00000391901 SLC3A2P08195 630 aaKnown RBP17.09■□□□□ 0.33
ZNF541-203ENST00000391901 RAI14Q9P0K7 980 aa17.09■□□□□ 0.33
ZNF541-203ENST00000391901 IFIT5Q13325 482 aaKnown RBP17.09■□□□□ 0.33
ZNF541-203ENST00000391901 MAST1Q9Y2H9 1570 aa17.09■□□□□ 0.33
ZNF541-203ENST00000391901 NPC1L1Q9UHC9 1359 aa17.09■□□□□ 0.33
ZNF541-203ENST00000391901 IGHMBP2P38935 993 aaKnown RBP17.09■□□□□ 0.33
ZNF541-203ENST00000391901 NCBP3Q53F19 620 aaKnown RBP17.09■□□□□ 0.33
ZNF541-203ENST00000391901 RHPN1Q8TCX5 695 aa17.09■□□□□ 0.33
ZNF541-203ENST00000391901 FLT4P35916 1363 aa17.09■□□□□ 0.33
ZNF541-203ENST00000391901 RNF123Q5XPI4 1314 aa17.09■□□□□ 0.33
ZNF541-203ENST00000391901 CCDC69A6NI79 296 aa17.08■□□□□ 0.33
ZNF541-203ENST00000391901 AKAP2Q9Y2D5 859 aa17.08■□□□□ 0.33
ZNF541-203ENST00000391901 CTDP1Q9Y5B0 961 aaPredicted RBP17.08■□□□□ 0.33
ZNF541-203ENST00000391901 KLHL34Q8N239 644 aa17.08■□□□□ 0.32
ZNF541-203ENST00000391901 ZBTB40Q9NUA8 1239 aa17.08■□□□□ 0.32
ZNF541-203ENST00000391901 SPATA31E1Q6ZUB1 1445 aa17.08■□□□□ 0.32
ZNF541-203ENST00000391901 AIDAQ96BJ3 306 aa17.08■□□□□ 0.32
ZNF541-203ENST00000391901 TRMT112Q9UI30 125 aaKnown RBP17.08■□□□□ 0.32
ZNF541-203ENST00000391901 SYCE3A1L190 88 aa17.08■□□□□ 0.32
ZNF541-203ENST00000391901 IMMTQ16891 758 aaKnown RBP17.08■□□□□ 0.32
ZNF541-203ENST00000391901 JMYQ8N9B5 988 aa17.08■□□□□ 0.32
ZNF541-203ENST00000391901 MBD5Q9P267 1494 aa17.08■□□□□ 0.32
ZNF541-203ENST00000391901 ANKRD13DQ6ZTN6 518 aa17.07■□□□□ 0.32
ZNF541-203ENST00000391901 ZSCAN30Q86W11 494 aa17.07■□□□□ 0.32
ZNF541-203ENST00000391901 U3KPZ7 1027 aaPredicted RBP17.07■□□□□ 0.32
ZNF541-203ENST00000391901 SNRPA1P09661 255 aaKnown RBP17.07■□□□□ 0.32
ZNF541-203ENST00000391901 HMGN5P82970 282 aaKnown RBP17.07■□□□□ 0.32
ZNF541-203ENST00000391901 MAPK8IP2Q13387 824 aaPredicted RBP17.07■□□□□ 0.32
ZNF541-203ENST00000391901 PDILTQ8N807 584 aa17.07■□□□□ 0.32
ZNF541-203ENST00000391901 TCEAL9Q9UHQ7 104 aa17.07■□□□□ 0.32
ZNF541-203ENST00000391901 SMC2O95347 1197 aa17.07■□□□□ 0.32
ZNF541-203ENST00000391901 CABLES1Q8TDN4 633 aa17.07■□□□□ 0.32
ZNF541-203ENST00000391901 PDE1AP54750 535 aa17.06■□□□□ 0.32
ZNF541-203ENST00000391901 IKQ13123 557 aaPredicted RBP17.06■□□□□ 0.32
ZNF541-203ENST00000391901 PRDM10Q9NQV6 1147 aa17.06■□□□□ 0.32
ZNF541-203ENST00000391901 COPS6Q7L5N1 327 aa17.06■□□□□ 0.32
ZNF541-203ENST00000391901 BBXQ8WY36 941 aaPredicted RBP17.06■□□□□ 0.32
ZNF541-203ENST00000391901 ZHX1Q9UKY1 873 aaPredicted RBP17.06■□□□□ 0.32
ZNF541-203ENST00000391901 PIP4K2AP48426 406 aaPredicted RBP17.05■□□□□ 0.32
ZNF541-203ENST00000391901 XAGE3Q8WTP9 111 aa17.05■□□□□ 0.32
ZNF541-203ENST00000391901 SNRKQ9NRH2 765 aa17.05■□□□□ 0.32
ZNF541-203ENST00000391901 CFAP45Q9UL16 551 aa17.05■□□□□ 0.32
ZNF541-203ENST00000391901 LIMCH1Q9UPQ0 1083 aa17.05■□□□□ 0.32
ZNF541-203ENST00000391901 CFAP65Q6ZU64 1925 aaKnown RBP17.05■□□□□ 0.32
ZNF541-203ENST00000391901 EVI5LQ96CN4 794 aa17.05■□□□□ 0.32
ZNF541-203ENST00000391901 CEP89Q96ST8 783 aa17.05■□□□□ 0.32
ZNF541-203ENST00000391901 UBAC1Q9BSL1 405 aa17.05■□□□□ 0.32
ZNF541-203ENST00000391901 EXOC5O00471 708 aa17.05■□□□□ 0.32
ZNF541-203ENST00000391901 GOLGA6L1Q8N7Z2 621 aa17.05■□□□□ 0.32
ZNF541-203ENST00000391901 TBX22Q9Y458 520 aa17.04■□□□□ 0.32
ZNF541-203ENST00000391901 SMC5Q8IY18 1101 aa17.04■□□□□ 0.32
ZNF541-203ENST00000391901 NUP62CLQ9H1M0 184 aa17.04■□□□□ 0.32
ZNF541-203ENST00000391901 AKAP4Q5JQC9 854 aa17.04■□□□□ 0.32
ZNF541-203ENST00000391901 GCP02774 474 aa17.04■□□□□ 0.32
ZNF541-203ENST00000391901 ATP2B2Q01814 1243 aa17.04■□□□□ 0.32
ZNF541-203ENST00000391901 GDPD2Q9HCC8 539 aa17.04■□□□□ 0.32
ZNF541-203ENST00000391901 CCDC66A2RUB6 948 aa17.03■□□□□ 0.32
ZNF541-203ENST00000391901 GOLIM4O00461 696 aa17.03■□□□□ 0.32
ZNF541-203ENST00000391901 TRIM35Q9UPQ4 493 aa17.03■□□□□ 0.32
ZNF541-203ENST00000391901 PTPRTO14522 1441 aa17.03■□□□□ 0.32
ZNF541-203ENST00000391901 ZFYVE9O95405 1425 aa17.03■□□□□ 0.32
ZNF541-203ENST00000391901 KDM6BO15054 1643 aa17.03■□□□□ 0.32
ZNF541-203ENST00000391901 SEC24BO95487 1268 aa17.03■□□□□ 0.32
ZNF541-203ENST00000391901 IL13P35225 146 aa17.03■□□□□ 0.32
ZNF541-203ENST00000391901 ATP8B2P98198 1209 aa17.03■□□□□ 0.32
ZNF541-203ENST00000391901 CWC25Q9NXE8 425 aaPredicted RBP17.03■□□□□ 0.32
ZNF541-203ENST00000391901 DCTPP1Q9H773 170 aa17.03■□□□□ 0.32
ZNF541-203ENST00000391901 LDHAL6AQ6ZMR3 332 aa17.02■□□□□ 0.32
ZNF541-203ENST00000391901 SH2B1Q9NRF2 756 aaPredicted RBP17.02■□□□□ 0.32
ZNF541-203ENST00000391901 CDKL5O76039 1030 aa17.02■□□□□ 0.32
ZNF541-203ENST00000391901 CEP85Q6P2H3 762 aa17.02■□□□□ 0.31
ZNF541-203ENST00000391901 NPHP3Q7Z494 1330 aa17.01■□□□□ 0.31
ZNF541-203ENST00000391901 HOXC9P31274 260 aa17.01■□□□□ 0.31
ZNF541-203ENST00000391901 HSP90AB3PQ58FF7 597 aa17.01■□□□□ 0.31
ZNF541-203ENST00000391901 KSR2Q6VAB6 950 aa17.01■□□□□ 0.31
ZNF541-203ENST00000391901 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.01■□□□□ 0.31
ZNF541-203ENST00000391901 UQCRHLA0A096LP55 91 aa17.01■□□□□ 0.31
ZNF541-203ENST00000391901 GRM8O00222 908 aa17.01■□□□□ 0.31
ZNF541-203ENST00000391901 UQCRHP07919 91 aa17.01■□□□□ 0.31
ZNF541-203ENST00000391901 GUCY1B3Q02153 619 aa17.01■□□□□ 0.31
ZNF541-203ENST00000391901 CAMK4Q16566 473 aa17.01■□□□□ 0.31
ZNF541-203ENST00000391901 PIBF1Q8WXW3 757 aa17.01■□□□□ 0.31
ZNF541-203ENST00000391901 ZNF652Q9Y2D9 606 aa17.01■□□□□ 0.31
ZNF541-203ENST00000391901 MINDY4BA8MYZ0 360 aa17■□□□□ 0.31
ZNF541-203ENST00000391901 NFATC2IPQ8NCF5 419 aa17■□□□□ 0.31
ZNF541-203ENST00000391901 ANKRD18BA2A2Z9 1011 aa17■□□□□ 0.31
ZNF541-203ENST00000391901 BRPF1P55201 1214 aaPredicted RBP17■□□□□ 0.31
ZNF541-203ENST00000391901 G2E3Q7L622 706 aa17■□□□□ 0.31
ZNF541-203ENST00000391901 PA2G4Q9UQ80 394 aaKnown RBP17■□□□□ 0.31
ZNF541-203ENST00000391901 TXLNAP40222 546 aa17■□□□□ 0.31
ZNF541-203ENST00000391901 CCDC43Q96MW1 224 aaKnown RBP17■□□□□ 0.31
ZNF541-203ENST00000391901 NAPBQ9H115 298 aa17■□□□□ 0.31
ZNF541-203ENST00000391901 GCC2Q8IWJ2 1684 aa17■□□□□ 0.31
ZNF541-203ENST00000391901 ZBTB7BO15156 539 aaPredicted RBP16.99■□□□□ 0.31
ZNF541-203ENST00000391901 ZCRB1Q8TBF4 217 aaKnown RBP16.99■□□□□ 0.31
ZNF541-203ENST00000391901 KAT6BQ8WYB5 2073 aa16.99■□□□□ 0.31
ZNF541-203ENST00000391901 PDIA4P13667 645 aaKnown RBP16.99■□□□□ 0.31
ZNF541-203ENST00000391901 DDX46Q7L014 1031 aaKnown RBP16.99■□□□□ 0.31
ZNF541-203ENST00000391901 MNS1Q8NEH6 495 aa16.99■□□□□ 0.31
ZNF541-203ENST00000391901 C19orf44Q9H6X5 657 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms