RNA–Protein interactions for RNA: ENST00000390442.3

TRAV12-3-201, Transcript of T cell receptor alpha variable 12-3, humanhuman

APPRIS P1 BASIC

Gene TRAV12-3, Length 399 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3-201ENST00000390442 PPP2R1AP30153 589 aa9.52□□□□□ -0.89
TRAV12-3-201ENST00000390442 SLC27A3Q5K4L6 730 aa9.52□□□□□ -0.89
TRAV12-3-201ENST00000390442 KRI1Q8N9T8 703 aaKnown RBP9.52□□□□□ -0.89
TRAV12-3-201ENST00000390442 NLGN2Q8NFZ4 835 aa9.52□□□□□ -0.89
TRAV12-3-201ENST00000390442 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.52□□□□□ -0.89
TRAV12-3-201ENST00000390442 TFCP2L1Q9NZI6 479 aa9.52□□□□□ -0.89
TRAV12-3-201ENST00000390442 PNPLA7Q6ZV29 1317 aa9.52□□□□□ -0.89
TRAV12-3-201ENST00000390442 LY75O60449 1722 aa9.51□□□□□ -0.89
TRAV12-3-201ENST00000390442 TATP17735 454 aaPredicted RBP9.51□□□□□ -0.89
TRAV12-3-201ENST00000390442 FXR2P51116 673 aaKnown RBP eCLIP9.51□□□□□ -0.89
TRAV12-3-201ENST00000390442 DDX54Q8TDD1 881 aaKnown RBP9.51□□□□□ -0.89
TRAV12-3-201ENST00000390442 KIF12Q96FN5 646 aa9.51□□□□□ -0.89
TRAV12-3-201ENST00000390442 TRIM66O15016 1216 aa9.5□□□□□ -0.89
TRAV12-3-201ENST00000390442 GRIN3BO60391 1043 aa9.5□□□□□ -0.89
TRAV12-3-201ENST00000390442 PDE4DQ08499 809 aa9.5□□□□□ -0.89
TRAV12-3-201ENST00000390442 DDX10Q13206 875 aaKnown RBP9.5□□□□□ -0.89
TRAV12-3-201ENST00000390442 CAMK2BQ13554 666 aa9.5□□□□□ -0.89
TRAV12-3-201ENST00000390442 RAPGEF4Q8WZA2 1011 aa9.5□□□□□ -0.89
TRAV12-3-201ENST00000390442 SYTL4Q96C24 671 aaPredicted RBP9.5□□□□□ -0.89
TRAV12-3-201ENST00000390442 ADAMTS7Q9UKP4 1686 aa9.5□□□□□ -0.89
TRAV12-3-201ENST00000390442 ATP10DQ9P241 1426 aa9.49□□□□□ -0.89
TRAV12-3-201ENST00000390442 PHKG2P15735 406 aa9.49□□□□□ -0.89
TRAV12-3-201ENST00000390442 YBX3P16989 372 aaKnown RBP eCLIP9.49□□□□□ -0.89
TRAV12-3-201ENST00000390442 KCNQ4P56696 695 aa9.49□□□□□ -0.89
TRAV12-3-201ENST00000390442 FLIIQ13045 1269 aa9.49□□□□□ -0.89
TRAV12-3-201ENST00000390442 LARP6Q9BRS8 491 aaKnown RBP9.49□□□□□ -0.89
TRAV12-3-201ENST00000390442 C1orf115Q9H7X2 142 aa9.49□□□□□ -0.89
TRAV12-3-201ENST00000390442 PCDH11XQ9BZA7 1347 aa9.49□□□□□ -0.89
TRAV12-3-201ENST00000390442 PCDH11YQ9BZA8 1340 aa9.49□□□□□ -0.89
TRAV12-3-201ENST00000390442 VIRMAQ69YN4 1812 aaKnown RBP9.49□□□□□ -0.89
TRAV12-3-201ENST00000390442 KDM6AO15550 1401 aaPredicted RBP9.48□□□□□ -0.89
TRAV12-3-201ENST00000390442 PRIM1P49642 420 aaKnown RBP9.48□□□□□ -0.89
TRAV12-3-201ENST00000390442 SULT6B1Q6IMI4 303 aa9.48□□□□□ -0.89
TRAV12-3-201ENST00000390442 ARID3AQ99856 593 aa9.48□□□□□ -0.89
TRAV12-3-201ENST00000390442 SCN11AQ9UI33 1791 aa9.47□□□□□ -0.89
TRAV12-3-201ENST00000390442 DIAPH1O60610 1272 aaKnown RBP9.47□□□□□ -0.89
TRAV12-3-201ENST00000390442 MKRN3Q13064 507 aaKnown RBP9.47□□□□□ -0.89
TRAV12-3-201ENST00000390442 CNGB1Q14028 1251 aaPredicted RBP9.47□□□□□ -0.89
TRAV12-3-201ENST00000390442 DDX27Q96GQ7 796 aaKnown RBP9.47□□□□□ -0.89
TRAV12-3-201ENST00000390442 CRISPLD2Q9H0B8 497 aa9.47□□□□□ -0.89
TRAV12-3-201ENST00000390442 CCNL1Q9UK58 526 aaPredicted RBP9.47□□□□□ -0.89
TRAV12-3-201ENST00000390442 HMOX1P09601 288 aa9.46□□□□□ -0.9
TRAV12-3-201ENST00000390442 MSL1Q68DK7 614 aa9.46□□□□□ -0.9
TRAV12-3-201ENST00000390442 PHF12Q96QT6 1004 aa9.46□□□□□ -0.9
TRAV12-3-201ENST00000390442 SPG7Q9UQ90 795 aa9.46□□□□□ -0.9
TRAV12-3-201ENST00000390442 TAF1LQ8IZX4 1826 aa9.46□□□□□ -0.9
TRAV12-3-201ENST00000390442 RBM26Q5T8P6 1007 aaKnown RBP9.45□□□□□ -0.9
TRAV12-3-201ENST00000390442 IFNL2Q8IZJ0 200 aa9.45□□□□□ -0.9
TRAV12-3-201ENST00000390442 ZNF526Q8TF50 670 aaPredicted RBP9.45□□□□□ -0.9
TRAV12-3-201ENST00000390442 PIGBQ92521 554 aa9.45□□□□□ -0.9
TRAV12-3-201ENST00000390442 HSPA6P17066 643 aa9.44□□□□□ -0.9
TRAV12-3-201ENST00000390442 MTHFSDQ2M296 383 aaKnown RBP9.44□□□□□ -0.9
TRAV12-3-201ENST00000390442 AMOTQ4VCS5 1084 aa9.44□□□□□ -0.9
TRAV12-3-201ENST00000390442 PLEKHO1Q53GL0 409 aaPredicted RBP9.44□□□□□ -0.9
TRAV12-3-201ENST00000390442 COL23A1Q86Y22 540 aaPredicted RBP9.44□□□□□ -0.9
TRAV12-3-201ENST00000390442 PIP4P2Q8N4L2 257 aa9.44□□□□□ -0.9
TRAV12-3-201ENST00000390442 DDRGK1Q96HY6 314 aa9.44□□□□□ -0.9
TRAV12-3-201ENST00000390442 PHACTR3Q96KR7 559 aa9.44□□□□□ -0.9
TRAV12-3-201ENST00000390442 MRC1P22897 1456 aa9.44□□□□□ -0.9
TRAV12-3-201ENST00000390442 C5P01031 1676 aa9.44□□□□□ -0.9
TRAV12-3-201ENST00000390442 SIPA1L3O60292 1781 aaPredicted RBP9.43□□□□□ -0.9
TRAV12-3-201ENST00000390442 PDIA4P13667 645 aaKnown RBP9.43□□□□□ -0.9
TRAV12-3-201ENST00000390442 RALBP1Q15311 655 aa9.43□□□□□ -0.9
TRAV12-3-201ENST00000390442 MS4A4AQ96JQ5 239 aa9.43□□□□□ -0.9
TRAV12-3-201ENST00000390442 SLC4A9Q96Q91 983 aa9.43□□□□□ -0.9
TRAV12-3-201ENST00000390442 PRKRIP1Q9H875 184 aaPredicted RBP9.43□□□□□ -0.9
TRAV12-3-201ENST00000390442 ZNF831Q5JPB2 1677 aa9.42□□□□□ -0.9
TRAV12-3-201ENST00000390442 ADCY9O60503 1353 aa9.42□□□□□ -0.9
TRAV12-3-201ENST00000390442 ZNF316A6NFI3 1004 aaPredicted RBP9.42□□□□□ -0.9
TRAV12-3-201ENST00000390442 ZNF530Q6P9A1 599 aaPredicted RBP9.42□□□□□ -0.9
TRAV12-3-201ENST00000390442 MPRIPQ6WCQ1 1025 aa9.42□□□□□ -0.9
TRAV12-3-201ENST00000390442 DCAF5Q96JK2 942 aa9.42□□□□□ -0.9
TRAV12-3-201ENST00000390442 PLEKHF1Q96S99 279 aa9.42□□□□□ -0.9
TRAV12-3-201ENST00000390442 LGR6Q9HBX8 967 aa9.42□□□□□ -0.9
TRAV12-3-201ENST00000390442 CD2APQ9Y5K6 639 aa9.42□□□□□ -0.9
TRAV12-3-201ENST00000390442 DLG5Q8TDM6 1919 aa9.41□□□□□ -0.9
TRAV12-3-201ENST00000390442 ERVV-2B6SEH9 535 aa9.41□□□□□ -0.9
TRAV12-3-201ENST00000390442 APBB1O00213 710 aa9.41□□□□□ -0.9
TRAV12-3-201ENST00000390442 IL17REQ8NFR9 667 aa9.41□□□□□ -0.9
TRAV12-3-201ENST00000390442 ATG3Q9NT62 314 aa9.41□□□□□ -0.9
TRAV12-3-201ENST00000390442 WWC3Q9ULE0 1092 aa9.41□□□□□ -0.9
TRAV12-3-201ENST00000390442 ASAP1Q9ULH1 1129 aa9.41□□□□□ -0.9
TRAV12-3-201ENST00000390442 TRPC6Q9Y210 931 aa9.41□□□□□ -0.9
TRAV12-3-201ENST00000390442 CICQ96RK0 1608 aaPredicted RBP9.41□□□□□ -0.9
TRAV12-3-201ENST00000390442 MYH14Q7Z406 1995 aaKnown RBP9.41□□□□□ -0.9
TRAV12-3-201ENST00000390442 PALLDQ8WX93 1383 aa9.4□□□□□ -0.9
TRAV12-3-201ENST00000390442 U2SURPO15042 1029 aaKnown RBP9.4□□□□□ -0.9
TRAV12-3-201ENST00000390442 FCHSD2O94868 740 aa9.4□□□□□ -0.9
TRAV12-3-201ENST00000390442 PRKAR2BP31323 418 aa9.4□□□□□ -0.9
TRAV12-3-201ENST00000390442 MLLT3P42568 568 aaPredicted RBP9.4□□□□□ -0.9
TRAV12-3-201ENST00000390442 AKAP4Q5JQC9 854 aa9.4□□□□□ -0.9
TRAV12-3-201ENST00000390442 CHRDL2Q6WN34 429 aa9.4□□□□□ -0.9
TRAV12-3-201ENST00000390442 AMIGO3Q86WK7 504 aa9.4□□□□□ -0.9
TRAV12-3-201ENST00000390442 FLAD1Q8NFF5 587 aa9.4□□□□□ -0.9
TRAV12-3-201ENST00000390442 UBR3Q6ZT12 1888 aa9.4□□□□□ -0.91
TRAV12-3-201ENST00000390442 UBR2Q8IWV8 1755 aa9.4□□□□□ -0.91
TRAV12-3-201ENST00000390442 COL5A3P25940 1745 aaPredicted RBP9.39□□□□□ -0.91
TRAV12-3-201ENST00000390442 CEMIPQ8WUJ3 1361 aa9.39□□□□□ -0.91
TRAV12-3-201ENST00000390442 MYBBP1AQ9BQG0 1328 aaKnown RBP9.39□□□□□ -0.91
TRAV12-3-201ENST00000390442 RNMTO43148 476 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms