RNA–Protein interactions for RNA: ENST00000390387.3

TRBV3-1-201, Transcript of T cell receptor beta variable 3-1, humanhuman

APPRIS P1 BASIC

Gene TRBV3-1, Length 391 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV3-1-201ENST00000390387 KCPQ6ZWJ8 1503 aa12.72□□□□□ -0.37
TRBV3-1-201ENST00000390387 PCNTO95613 3336 aa12.72□□□□□ -0.37
TRBV3-1-201ENST00000390387 SLC39A6Q13433 755 aa12.72□□□□□ -0.37
TRBV3-1-201ENST00000390387 USPL1Q5W0Q7 1092 aa12.72□□□□□ -0.37
TRBV3-1-201ENST00000390387 RBM46Q8TBY0 533 aaKnown RBP12.72□□□□□ -0.37
TRBV3-1-201ENST00000390387 RNMTO43148 476 aaKnown RBP12.71□□□□□ -0.37
TRBV3-1-201ENST00000390387 ZPR1O75312 459 aa12.71□□□□□ -0.37
TRBV3-1-201ENST00000390387 CYP19A1P11511 503 aaPredicted RBP12.71□□□□□ -0.37
TRBV3-1-201ENST00000390387 RNF181Q9P0P0 153 aa12.71□□□□□ -0.37
TRBV3-1-201ENST00000390387 WDR90Q96KV7 1748 aa12.71□□□□□ -0.38
TRBV3-1-201ENST00000390387 COL15A1P39059 1388 aa12.7□□□□□ -0.38
TRBV3-1-201ENST00000390387 HMOX1P09601 288 aa12.7□□□□□ -0.38
TRBV3-1-201ENST00000390387 NARFQ9UHQ1 456 aa12.7□□□□□ -0.38
TRBV3-1-201ENST00000390387 ZBTB1Q9Y2K1 713 aa12.7□□□□□ -0.38
TRBV3-1-201ENST00000390387 NRXN2Q9P2S2 1712 aa12.69□□□□□ -0.38
TRBV3-1-201ENST00000390387 NFIXQ14938 502 aa12.69□□□□□ -0.38
TRBV3-1-201ENST00000390387 BCL2L12Q9HB09 334 aa12.69□□□□□ -0.38
TRBV3-1-201ENST00000390387 KIF7Q2M1P5 1343 aa12.68□□□□□ -0.38
TRBV3-1-201ENST00000390387 KDM2BQ8NHM5 1336 aa12.68□□□□□ -0.38
TRBV3-1-201ENST00000390387 AFDNP55196 1824 aaKnown RBP12.68□□□□□ -0.38
TRBV3-1-201ENST00000390387 MTHFSDQ2M296 383 aaKnown RBP12.68□□□□□ -0.38
TRBV3-1-201ENST00000390387 C16orf71Q8IYS4 520 aaPredicted RBP12.68□□□□□ -0.38
TRBV3-1-201ENST00000390387 SBF1O95248 1867 aa12.68□□□□□ -0.38
TRBV3-1-201ENST00000390387 TNRC6CQ9HCJ0 1690 aaKnown RBP12.67□□□□□ -0.38
TRBV3-1-201ENST00000390387 VIRMAQ69YN4 1812 aaKnown RBP12.67□□□□□ -0.38
TRBV3-1-201ENST00000390387 UBR2Q8IWV8 1755 aa12.67□□□□□ -0.38
TRBV3-1-201ENST00000390387 HTRA3P83110 453 aa12.67□□□□□ -0.38
TRBV3-1-201ENST00000390387 RASSF7Q02833 373 aa12.67□□□□□ -0.38
TRBV3-1-201ENST00000390387 FSTL1Q12841 308 aa12.67□□□□□ -0.38
TRBV3-1-201ENST00000390387 VSIG10Q8N0Z9 540 aa12.67□□□□□ -0.38
TRBV3-1-201ENST00000390387 RRAGCQ9HB90 399 aa12.67□□□□□ -0.38
TRBV3-1-201ENST00000390387 DLEC1Q9Y238 1755 aa12.66□□□□□ -0.38
TRBV3-1-201ENST00000390387 ZC3H4Q9UPT8 1303 aaKnown RBP12.66□□□□□ -0.38
TRBV3-1-201ENST00000390387 PER1O15534 1290 aaPredicted RBP12.66□□□□□ -0.38
TRBV3-1-201ENST00000390387 DIAPH1O60610 1272 aaKnown RBP12.66□□□□□ -0.38
TRBV3-1-201ENST00000390387 SERPINB2P05120 415 aa12.66□□□□□ -0.38
TRBV3-1-201ENST00000390387 PRELPP51888 382 aa12.66□□□□□ -0.38
TRBV3-1-201ENST00000390387 CARMIL3Q8ND23 1372 aa12.66□□□□□ -0.38
TRBV3-1-201ENST00000390387 KLRG1Q96E93 195 aa12.65□□□□□ -0.38
TRBV3-1-201ENST00000390387 COL3A1P02461 1466 aaPredicted RBP12.65□□□□□ -0.38
TRBV3-1-201ENST00000390387 LMNB1P20700 586 aa12.64□□□□□ -0.39
TRBV3-1-201ENST00000390387 CANXP27824 592 aaKnown RBP12.64□□□□□ -0.39
TRBV3-1-201ENST00000390387 EIF5P55010 431 aaKnown RBP12.64□□□□□ -0.39
TRBV3-1-201ENST00000390387 POTEHQ6S545 545 aa12.64□□□□□ -0.39
TRBV3-1-201ENST00000390387 JMYQ8N9B5 988 aa12.64□□□□□ -0.39
TRBV3-1-201ENST00000390387 CC2D1BQ5T0F9 858 aaKnown RBP12.63□□□□□ -0.39
TRBV3-1-201ENST00000390387 C2CD5Q86YS7 1000 aa12.63□□□□□ -0.39
TRBV3-1-201ENST00000390387 TTLL6Q8N841 843 aa12.63□□□□□ -0.39
TRBV3-1-201ENST00000390387 CCER1Q8TC90 406 aaPredicted RBP12.63□□□□□ -0.39
TRBV3-1-201ENST00000390387 SCN7AQ01118 1682 aa12.62□□□□□ -0.39
TRBV3-1-201ENST00000390387 HEG1Q9ULI3 1381 aa12.62□□□□□ -0.39
TRBV3-1-201ENST00000390387 GLTPD2A6NH11 291 aa12.62□□□□□ -0.39
TRBV3-1-201ENST00000390387 H0YIN7 160 aa12.62□□□□□ -0.39
TRBV3-1-201ENST00000390387 NFKBIEO00221 500 aa12.62□□□□□ -0.39
TRBV3-1-201ENST00000390387 STARD3NLO95772 234 aa12.62□□□□□ -0.39
TRBV3-1-201ENST00000390387 BICDL1Q6ZP65 573 aa12.62□□□□□ -0.39
TRBV3-1-201ENST00000390387 TTC5Q8N0Z6 440 aa12.62□□□□□ -0.39
TRBV3-1-201ENST00000390387 SMC1BQ8NDV3 1235 aa12.62□□□□□ -0.39
TRBV3-1-201ENST00000390387 ZNF496Q96IT1 587 aaPredicted RBP12.62□□□□□ -0.39
TRBV3-1-201ENST00000390387 TIAM2Q8IVF5 1701 aa12.62□□□□□ -0.39
TRBV3-1-201ENST00000390387 A0A087WZG4 1122 aa12.61□□□□□ -0.39
TRBV3-1-201ENST00000390387 TBC1D9BQ66K14 1250 aa12.61□□□□□ -0.39
TRBV3-1-201ENST00000390387 ZNF790Q6PG37 636 aa12.61□□□□□ -0.39
TRBV3-1-201ENST00000390387 IL17REQ8NFR9 667 aa12.61□□□□□ -0.39
TRBV3-1-201ENST00000390387 ANKRD31Q8N7Z5 1873 aa12.61□□□□□ -0.39
TRBV3-1-201ENST00000390387 SIPA1L3O60292 1781 aaPredicted RBP12.61□□□□□ -0.39
TRBV3-1-201ENST00000390387 VEGFAP15692 232 aaPredicted RBP12.6□□□□□ -0.39
TRBV3-1-201ENST00000390387 NCBP3Q53F19 620 aaKnown RBP12.6□□□□□ -0.39
TRBV3-1-201ENST00000390387 COL11A2P13942 1736 aaPredicted RBP12.59□□□□□ -0.39
TRBV3-1-201ENST00000390387 NPC1L1Q9UHC9 1359 aa12.59□□□□□ -0.39
TRBV3-1-201ENST00000390387 GNAT3A8MTJ3 354 aa12.59□□□□□ -0.39
TRBV3-1-201ENST00000390387 IL6STP40189 918 aaPredicted RBP12.59□□□□□ -0.39
TRBV3-1-201ENST00000390387 TEFQ10587 303 aa12.59□□□□□ -0.39
TRBV3-1-201ENST00000390387 PRR5LQ6MZQ0 368 aa12.59□□□□□ -0.39
TRBV3-1-201ENST00000390387 GAS2L2Q8NHY3 880 aa12.59□□□□□ -0.39
TRBV3-1-201ENST00000390387 BRIP1Q9BX63 1249 aa12.59□□□□□ -0.39
TRBV3-1-201ENST00000390387 TEX13AQ9BXU3 409 aaPredicted RBP12.59□□□□□ -0.39
TRBV3-1-201ENST00000390387 TBC1D2BQ9UPU7 963 aa12.59□□□□□ -0.39
TRBV3-1-201ENST00000390387 CEMIPQ8WUJ3 1361 aa12.58□□□□□ -0.4
TRBV3-1-201ENST00000390387 POTECB2RU33 542 aa12.58□□□□□ -0.4
TRBV3-1-201ENST00000390387 U2SURPO15042 1029 aaKnown RBP12.58□□□□□ -0.4
TRBV3-1-201ENST00000390387 COL13A1Q5TAT6 717 aaPredicted RBP12.58□□□□□ -0.4
TRBV3-1-201ENST00000390387 CCDC24Q8N4L8 307 aa12.58□□□□□ -0.4
TRBV3-1-201ENST00000390387 ZNF622Q969S3 477 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRBV3-1-201ENST00000390387 PDZRN3Q9UPQ7 1066 aa12.58□□□□□ -0.4
TRBV3-1-201ENST00000390387 C21orf2O43822 256 aa12.57□□□□□ -0.4
TRBV3-1-201ENST00000390387 A1BGP04217 495 aa12.57□□□□□ -0.4
TRBV3-1-201ENST00000390387 PDE6BP35913 854 aa12.57□□□□□ -0.4
TRBV3-1-201ENST00000390387 FMNL2Q96PY5 1086 aa12.57□□□□□ -0.4
TRBV3-1-201ENST00000390387 ZNF330Q9Y3S2 320 aaPredicted RBP12.57□□□□□ -0.4
TRBV3-1-201ENST00000390387 CCDC88AQ3V6T2 1871 aa12.57□□□□□ -0.4
TRBV3-1-201ENST00000390387 KCNQ3O43525 872 aa12.56□□□□□ -0.4
TRBV3-1-201ENST00000390387 NPM3O75607 178 aaKnown RBP12.56□□□□□ -0.4
TRBV3-1-201ENST00000390387 CAMTA2O94983 1202 aa12.56□□□□□ -0.4
TRBV3-1-201ENST00000390387 CNGB1Q14028 1251 aaPredicted RBP12.56□□□□□ -0.4
TRBV3-1-201ENST00000390387 ZNF219Q9P2Y4 722 aaPredicted RBP12.56□□□□□ -0.4
TRBV3-1-201ENST00000390387 FER1L6Q2WGJ9 1857 aa12.56□□□□□ -0.4
TRBV3-1-201ENST00000390387 CNBD1Q8NA66 436 aa12.55□□□□□ -0.4
TRBV3-1-201ENST00000390387 PHACTR3Q96KR7 559 aa12.55□□□□□ -0.4
TRBV3-1-201ENST00000390387 SETDB2Q96T68 719 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms