RNA–Protein interactions for RNA: ENST00000389463.8

LAMA4-205, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-205ENST00000389463 SPTY2D1Q68D10 685 aaPredicted RBP12.96□□□□□ -0.34
LAMA4-205ENST00000389463 C11orf95C9JLR9 678 aaPredicted RBP12.96□□□□□ -0.34
LAMA4-205ENST00000389463 SMARCA5O60264 1052 aaPredicted RBP12.96□□□□□ -0.34
LAMA4-205ENST00000389463 NKTRP30414 1462 aaKnown RBP12.95□□□□□ -0.34
LAMA4-205ENST00000389463 MYO1BO43795 1136 aa12.95□□□□□ -0.34
LAMA4-205ENST00000389463 WDR78Q5VTH9 848 aa12.95□□□□□ -0.34
LAMA4-205ENST00000389463 ANKRD13DQ6ZTN6 518 aa12.95□□□□□ -0.34
LAMA4-205ENST00000389463 WDR33Q9C0J8 1336 aaKnown RBP12.95□□□□□ -0.34
LAMA4-205ENST00000389463 TTF1Q15361 905 aaPredicted RBP12.95□□□□□ -0.34
LAMA4-205ENST00000389463 ATP10AO60312 1499 aa12.95□□□□□ -0.34
LAMA4-205ENST00000389463 FAM83GA6ND36 823 aa12.95□□□□□ -0.34
LAMA4-205ENST00000389463 KCNA6P17658 529 aa12.95□□□□□ -0.34
LAMA4-205ENST00000389463 UBE3BQ7Z3V4 1068 aa12.95□□□□□ -0.34
LAMA4-205ENST00000389463 DACH1Q9UI36 760 aa12.95□□□□□ -0.34
LAMA4-205ENST00000389463 RANBP6O60518 1105 aaKnown RBP12.95□□□□□ -0.34
LAMA4-205ENST00000389463 BAG3O95817 575 aa12.95□□□□□ -0.34
LAMA4-205ENST00000389463 IQCA1Q86XH1 822 aa12.95□□□□□ -0.34
LAMA4-205ENST00000389463 SMARCE1Q969G3 411 aa12.95□□□□□ -0.34
LAMA4-205ENST00000389463 RNF41Q9H4P4 317 aaPredicted RBP12.95□□□□□ -0.34
LAMA4-205ENST00000389463 TBX22Q9Y458 520 aa12.95□□□□□ -0.34
LAMA4-205ENST00000389463 CCDC173Q0VFZ6 552 aa12.94□□□□□ -0.34
LAMA4-205ENST00000389463 PDCL3Q9H2J4 239 aa12.94□□□□□ -0.34
LAMA4-205ENST00000389463 TRPM2O94759 1503 aa12.94□□□□□ -0.34
LAMA4-205ENST00000389463 MATR3P43243 847 aaKnown RBP eCLIP12.94□□□□□ -0.34
LAMA4-205ENST00000389463 MBIPQ9NS73 344 aa12.94□□□□□ -0.34
LAMA4-205ENST00000389463 PI4KAP2A4QPH2 592 aa12.94□□□□□ -0.34
LAMA4-205ENST00000389463 FBLN1P23142 703 aa12.94□□□□□ -0.34
LAMA4-205ENST00000389463 RDXP35241 583 aaKnown RBP12.94□□□□□ -0.34
LAMA4-205ENST00000389463 PI4KAP1Q8N8J0 262 aa12.94□□□□□ -0.34
LAMA4-205ENST00000389463 SMC2O95347 1197 aa12.94□□□□□ -0.34
LAMA4-205ENST00000389463 KRT85P78386 507 aa12.94□□□□□ -0.34
LAMA4-205ENST00000389463 TFCP2L1Q9NZI6 479 aa12.94□□□□□ -0.34
LAMA4-205ENST00000389463 NUP160Q12769 1436 aa12.94□□□□□ -0.34
LAMA4-205ENST00000389463 CASTP20810 708 aaKnown RBP12.93□□□□□ -0.34
LAMA4-205ENST00000389463 BRPF1P55201 1214 aaPredicted RBP12.93□□□□□ -0.34
LAMA4-205ENST00000389463 CTCFLQ8NI51 663 aaPredicted RBP12.93□□□□□ -0.34
LAMA4-205ENST00000389463 K7ELQ4 463 aaPredicted RBP12.93□□□□□ -0.34
LAMA4-205ENST00000389463 PRPF40AO75400 957 aaKnown RBP12.93□□□□□ -0.34
LAMA4-205ENST00000389463 ANKRD18AQ8IVF6 992 aa12.93□□□□□ -0.34
LAMA4-205ENST00000389463 CUL5Q93034 780 aa12.93□□□□□ -0.34
LAMA4-205ENST00000389463 CCDC196A0A1B0GTZ2 297 aa12.93□□□□□ -0.34
LAMA4-205ENST00000389463 NLRP3Q96P20 1036 aa12.93□□□□□ -0.34
LAMA4-205ENST00000389463 ZNF213O14771 459 aa12.93□□□□□ -0.34
LAMA4-205ENST00000389463 FEZ1Q99689 392 aa12.93□□□□□ -0.34
LAMA4-205ENST00000389463 RTCBQ9Y3I0 505 aaKnown RBP12.93□□□□□ -0.34
LAMA4-205ENST00000389463 PARP3Q9Y6F1 533 aa12.93□□□□□ -0.34
LAMA4-205ENST00000389463 HLA-DOAP06340 250 aa12.92□□□□□ -0.34
LAMA4-205ENST00000389463 NYXQ9GZU5 481 aa12.92□□□□□ -0.34
LAMA4-205ENST00000389463 CABP5Q9NP86 173 aa12.92□□□□□ -0.34
LAMA4-205ENST00000389463 CEP131Q9UPN4 1083 aa12.92□□□□□ -0.34
LAMA4-205ENST00000389463 ABCC1P33527 1531 aa12.92□□□□□ -0.34
LAMA4-205ENST00000389463 GSTO1P78417 241 aa12.92□□□□□ -0.34
LAMA4-205ENST00000389463 SLC39A6Q13433 755 aa12.92□□□□□ -0.34
LAMA4-205ENST00000389463 HDAC9Q9UKV0 1011 aa12.92□□□□□ -0.34
LAMA4-205ENST00000389463 TANGO6Q9C0B7 1094 aa12.92□□□□□ -0.34
LAMA4-205ENST00000389463 IL16Q14005 1332 aa12.92□□□□□ -0.34
LAMA4-205ENST00000389463 GCP02774 474 aa12.91□□□□□ -0.34
LAMA4-205ENST00000389463 PRPF40BQ6NWY9 871 aaKnown RBP12.91□□□□□ -0.34
LAMA4-205ENST00000389463 NIP7Q9Y221 180 aaKnown RBP eCLIP12.91□□□□□ -0.34
LAMA4-205ENST00000389463 FLT4P35916 1363 aa12.91□□□□□ -0.34
LAMA4-205ENST00000389463 TRIM5Q9C035 493 aa12.91□□□□□ -0.34
LAMA4-205ENST00000389463 EHMT1Q9H9B1 1298 aa12.91□□□□□ -0.34
LAMA4-205ENST00000389463 BTG4Q9NY30 223 aa12.91□□□□□ -0.34
LAMA4-205ENST00000389463 CFAP45Q9UL16 551 aa12.91□□□□□ -0.34
LAMA4-205ENST00000389463 IBSPP21815 317 aaPredicted RBP12.91□□□□□ -0.34
LAMA4-205ENST00000389463 XAGE3Q8WTP9 111 aa12.91□□□□□ -0.34
LAMA4-205ENST00000389463 SIRT1Q96EB6 747 aa12.91□□□□□ -0.34
LAMA4-205ENST00000389463 UQCRFS1P1P0C7P4 283 aa12.91□□□□□ -0.34
LAMA4-205ENST00000389463 CHMP4BP1P59074 171 aa12.91□□□□□ -0.34
LAMA4-205ENST00000389463 CAVIN1Q6NZI2 390 aaKnown RBP12.9□□□□□ -0.34
LAMA4-205ENST00000389463 RALGAPBQ86X10 1494 aa12.9□□□□□ -0.34
LAMA4-205ENST00000389463 ANXA1P04083 346 aa12.9□□□□□ -0.34
LAMA4-205ENST00000389463 EIF4A2Q14240 407 aaKnown RBP12.9□□□□□ -0.34
LAMA4-205ENST00000389463 SCLT1Q96NL6 688 aa12.9□□□□□ -0.34
LAMA4-205ENST00000389463 UTP14AQ9BVJ6 771 aaKnown RBP12.9□□□□□ -0.34
LAMA4-205ENST00000389463 CHPF2Q9P2E5 772 aa12.9□□□□□ -0.34
LAMA4-205ENST00000389463 PBRM1Q86U86 1689 aa12.9□□□□□ -0.34
LAMA4-205ENST00000389463 HMGB1P09429 215 aaKnown RBP12.9□□□□□ -0.34
LAMA4-205ENST00000389463 CDCA7Q9BWT1 371 aaPredicted RBP12.9□□□□□ -0.34
LAMA4-205ENST00000389463 ZNHIT6Q9NWK9 470 aaKnown RBP12.9□□□□□ -0.34
LAMA4-205ENST00000389463 PDIA4P13667 645 aaKnown RBP12.9□□□□□ -0.34
LAMA4-205ENST00000389463 PPP4R3AQ6IN85 833 aa12.9□□□□□ -0.34
LAMA4-205ENST00000389463 CEP57L1Q8IYX8 460 aa12.9□□□□□ -0.34
LAMA4-205ENST00000389463 NPATQ14207 1427 aa12.9□□□□□ -0.35
LAMA4-205ENST00000389463 COPS6Q7L5N1 327 aa12.89□□□□□ -0.35
LAMA4-205ENST00000389463 JARID2Q92833 1246 aaPredicted RBP12.89□□□□□ -0.35
LAMA4-205ENST00000389463 TSPY26PQ9H489 355 aa12.89□□□□□ -0.35
LAMA4-205ENST00000389463 SLC12A7Q9Y666 1083 aa12.89□□□□□ -0.35
LAMA4-205ENST00000389463 PCDH11XQ9BZA7 1347 aa12.89□□□□□ -0.35
LAMA4-205ENST00000389463 PCDH11YQ9BZA8 1340 aa12.89□□□□□ -0.35
LAMA4-205ENST00000389463 GOLIM4O00461 696 aa12.89□□□□□ -0.35
LAMA4-205ENST00000389463 DZIP3Q86Y13 1208 aaKnown RBP12.89□□□□□ -0.35
LAMA4-205ENST00000389463 DDX11Q96FC9 970 aa12.89□□□□□ -0.35
LAMA4-205ENST00000389463 RNF214Q8ND24 703 aa12.89□□□□□ -0.35
LAMA4-205ENST00000389463 CAGE1Q8TC20 777 aa12.89□□□□□ -0.35
LAMA4-205ENST00000389463 EVI5LQ96CN4 794 aa12.89□□□□□ -0.35
LAMA4-205ENST00000389463 SPATA32Q96LK8 384 aa12.89□□□□□ -0.35
LAMA4-205ENST00000389463 EIF2AK4Q9P2K8 1649 aaKnown RBP12.89□□□□□ -0.35
LAMA4-205ENST00000389463 PDE4BQ07343 736 aa12.89□□□□□ -0.35
LAMA4-205ENST00000389463 TNMDQ9H2S6 317 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms