RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 FAM193AP78312 1265 aa16.4■□□□□ 0.22
SNPH-201ENST00000381867 DUSP27Q5VZP5 1158 aa16.4■□□□□ 0.22
SNPH-201ENST00000381867 KDM5DQ9BY66 1539 aa16.4■□□□□ 0.22
SNPH-201ENST00000381867 EXOC5O00471 708 aa16.4■□□□□ 0.22
SNPH-201ENST00000381867 SLC3A2P08195 630 aaKnown RBP16.4■□□□□ 0.22
SNPH-201ENST00000381867 GBP3Q9H0R5 595 aa16.4■□□□□ 0.22
SNPH-201ENST00000381867 BLOC1S2Q6QNY1 142 aa16.4■□□□□ 0.22
SNPH-201ENST00000381867 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.4■□□□□ 0.22
SNPH-201ENST00000381867 KRT18P05783 430 aaKnown RBP16.39■□□□□ 0.21
SNPH-201ENST00000381867 SIRT1Q96EB6 747 aa16.39■□□□□ 0.21
SNPH-201ENST00000381867 CENPHQ9H3R5 247 aa16.39■□□□□ 0.21
SNPH-201ENST00000381867 CCDC57Q2TAC2 916 aa16.39■□□□□ 0.21
SNPH-201ENST00000381867 ZSCAN25Q6NSZ9 544 aa16.38■□□□□ 0.21
SNPH-201ENST00000381867 SEPT7Q16181 437 aaKnown RBP16.38■□□□□ 0.21
SNPH-201ENST00000381867 ENOX2Q16206 610 aaKnown RBP16.38■□□□□ 0.21
SNPH-201ENST00000381867 HYPKQ9NX55 129 aa16.38■□□□□ 0.21
SNPH-201ENST00000381867 TTC39AQ5SRH9 613 aa16.38■□□□□ 0.21
SNPH-201ENST00000381867 ANKRD18AQ8IVF6 992 aa16.38■□□□□ 0.21
SNPH-201ENST00000381867 ANKRD24Q8TF21 1146 aa16.38■□□□□ 0.21
SNPH-201ENST00000381867 INCENPQ9NQS7 918 aa16.38■□□□□ 0.21
SNPH-201ENST00000381867 SAMD9LQ8IVG5 1584 aa16.38■□□□□ 0.21
SNPH-201ENST00000381867 NGLY1Q96IV0 654 aa16.38■□□□□ 0.21
SNPH-201ENST00000381867 PDCL3Q9H2J4 239 aa16.38■□□□□ 0.21
SNPH-201ENST00000381867 POLR3AO14802 1390 aaPredicted RBP16.37■□□□□ 0.21
SNPH-201ENST00000381867 KCNA6P17658 529 aa16.37■□□□□ 0.21
SNPH-201ENST00000381867 PTPN14Q15678 1187 aa16.37■□□□□ 0.21
SNPH-201ENST00000381867 CBX1P83916 185 aa16.37■□□□□ 0.21
SNPH-201ENST00000381867 PTPRCP08575 1304 aa16.37■□□□□ 0.21
SNPH-201ENST00000381867 FLT4P35916 1363 aa16.37■□□□□ 0.21
SNPH-201ENST00000381867 JAKMIP1Q96N16 626 aaKnown RBP16.36■□□□□ 0.21
SNPH-201ENST00000381867 EPB41L2O43491 1005 aaKnown RBP16.36■□□□□ 0.21
SNPH-201ENST00000381867 MYL6BP14649 208 aa16.36■□□□□ 0.21
SNPH-201ENST00000381867 TMEM132AQ24JP5 1023 aa16.36■□□□□ 0.21
SNPH-201ENST00000381867 TMEM2Q9UHN6 1383 aa16.36■□□□□ 0.21
SNPH-201ENST00000381867 CDKL5O76039 1030 aa16.36■□□□□ 0.21
SNPH-201ENST00000381867 ARHGAP29Q52LW3 1261 aa16.36■□□□□ 0.21
SNPH-201ENST00000381867 HECW2Q9P2P5 1572 aa16.36■□□□□ 0.21
SNPH-201ENST00000381867 ATP2B2Q01814 1243 aa16.36■□□□□ 0.21
SNPH-201ENST00000381867 TAX1BP1Q86VP1 789 aa16.36■□□□□ 0.21
SNPH-201ENST00000381867 NOL7Q9UMY1 257 aaKnown RBP16.36■□□□□ 0.21
SNPH-201ENST00000381867 LRRFIP2Q9Y608 721 aaKnown RBP16.36■□□□□ 0.21
SNPH-201ENST00000381867 NPC1L1Q9UHC9 1359 aa16.36■□□□□ 0.21
SNPH-201ENST00000381867 TANGO6Q9C0B7 1094 aa16.35■□□□□ 0.21
SNPH-201ENST00000381867 PRDM10Q9NQV6 1147 aa16.35■□□□□ 0.21
SNPH-201ENST00000381867 CGNQ9P2M7 1197 aaKnown RBP16.35■□□□□ 0.21
SNPH-201ENST00000381867 COL17A1Q9UMD9 1497 aaPredicted RBP16.35■□□□□ 0.21
SNPH-201ENST00000381867 MPHOSPH8Q99549 860 aa16.35■□□□□ 0.21
SNPH-201ENST00000381867 KRT32Q14532 448 aa16.35■□□□□ 0.21
SNPH-201ENST00000381867 CCDC148Q8NFR7 591 aa16.35■□□□□ 0.21
SNPH-201ENST00000381867 DBF4Q9UBU7 674 aaPredicted RBP16.35■□□□□ 0.21
SNPH-201ENST00000381867 MCM10Q7L590 875 aa16.35■□□□□ 0.21
SNPH-201ENST00000381867 PIK3C2GO75747 1445 aa16.35■□□□□ 0.21
SNPH-201ENST00000381867 MAP4K4O95819 1239 aaPredicted RBP16.35■□□□□ 0.21
SNPH-201ENST00000381867 CCDC183Q5T5S1 534 aa16.35■□□□□ 0.21
SNPH-201ENST00000381867 CRACR2AQ9BSW2 395 aa16.35■□□□□ 0.21
SNPH-201ENST00000381867 SFPQP23246 707 aaKnown RBP eCLIP16.34■□□□□ 0.21
SNPH-201ENST00000381867 KIF18AQ8NI77 898 aa16.34■□□□□ 0.21
SNPH-201ENST00000381867 CALCOCO1Q9P1Z2 691 aa16.34■□□□□ 0.21
SNPH-201ENST00000381867 PARD3Q8TEW0 1356 aa16.34■□□□□ 0.21
SNPH-201ENST00000381867 SHTN1A0MZ66 631 aa16.34■□□□□ 0.21
SNPH-201ENST00000381867 CCDC69A6NI79 296 aa16.34■□□□□ 0.21
SNPH-201ENST00000381867 ZSCAN12O43309 604 aa16.34■□□□□ 0.21
SNPH-201ENST00000381867 TTC37Q6PGP7 1564 aa16.34■□□□□ 0.21
SNPH-201ENST00000381867 RBM5P52756 815 aaKnown RBP eCLIP16.34■□□□□ 0.21
SNPH-201ENST00000381867 RAB11FIP3O75154 756 aa16.34■□□□□ 0.21
SNPH-201ENST00000381867 TESK2Q96S53 571 aa16.34■□□□□ 0.21
SNPH-201ENST00000381867 GIMAP7Q8NHV1 300 aa16.33■□□□□ 0.21
SNPH-201ENST00000381867 CFAP100Q494V2 611 aa16.33■□□□□ 0.2
SNPH-201ENST00000381867 ADAMTS2O95450 1211 aa16.33■□□□□ 0.2
SNPH-201ENST00000381867 CEP126Q9P2H0 1117 aa16.33■□□□□ 0.2
SNPH-201ENST00000381867 NACAP1Q9BZK3 213 aa16.33■□□□□ 0.2
SNPH-201ENST00000381867 ANKRD62A6NC57 917 aa16.32■□□□□ 0.2
SNPH-201ENST00000381867 CCDC184Q52MB2 194 aa16.32■□□□□ 0.2
SNPH-201ENST00000381867 WWC2Q6AWC2 1192 aa16.32■□□□□ 0.2
SNPH-201ENST00000381867 KIAA1328Q86T90 577 aa16.32■□□□□ 0.2
SNPH-201ENST00000381867 NCKAP5LQ9HCH0 1330 aa16.32■□□□□ 0.2
SNPH-201ENST00000381867 IGHMBP2P38935 993 aaKnown RBP16.32■□□□□ 0.2
SNPH-201ENST00000381867 A0A087WZG4 1122 aa16.32■□□□□ 0.2
SNPH-201ENST00000381867 EDC4Q6P2E9 1401 aaKnown RBP16.32■□□□□ 0.2
SNPH-201ENST00000381867 PLXNC1O60486 1568 aa16.31■□□□□ 0.2
SNPH-201ENST00000381867 ADCY10Q96PN6 1610 aa16.31■□□□□ 0.2
SNPH-201ENST00000381867 RARSP54136 660 aaKnown RBP16.31■□□□□ 0.2
SNPH-201ENST00000381867 TAF4BQ92750 862 aa16.31■□□□□ 0.2
SNPH-201ENST00000381867 UBAP1LF5GYI3 381 aa16.31■□□□□ 0.2
SNPH-201ENST00000381867 MAP9Q49MG5 647 aa16.31■□□□□ 0.2
SNPH-201ENST00000381867 SRGAP3O43295 1099 aa16.31■□□□□ 0.2
SNPH-201ENST00000381867 EZRP15311 586 aaKnown RBP16.31■□□□□ 0.2
SNPH-201ENST00000381867 CWC27Q6UX04 472 aaKnown RBP16.31■□□□□ 0.2
SNPH-201ENST00000381867 LRRC59Q96AG4 307 aaKnown RBP16.31■□□□□ 0.2
SNPH-201ENST00000381867 SIL1Q9H173 461 aa16.31■□□□□ 0.2
SNPH-201ENST00000381867 AKAP2Q9Y2D5 859 aa16.31■□□□□ 0.2
SNPH-201ENST00000381867 USHBP1Q8N6Y0 703 aa16.3■□□□□ 0.2
SNPH-201ENST00000381867 ZPR1O75312 459 aa16.3■□□□□ 0.2
SNPH-201ENST00000381867 MAPK8IP2Q13387 824 aaPredicted RBP16.3■□□□□ 0.2
SNPH-201ENST00000381867 CAMK4Q16566 473 aa16.3■□□□□ 0.2
SNPH-201ENST00000381867 BICDL1Q6ZP65 573 aa16.3■□□□□ 0.2
SNPH-201ENST00000381867 MCM5P33992 734 aa16.3■□□□□ 0.2
SNPH-201ENST00000381867 AACSQ86V21 672 aa16.3■□□□□ 0.2
SNPH-201ENST00000381867 ANO10Q9NW15 660 aa16.3■□□□□ 0.2
SNPH-201ENST00000381867 CTNNA3Q9UI47 895 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms