RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 IL2RBP14784 551 aa18.32■□□□□ 0.52
RAB3IP-203ENST00000378809 OTUD7AQ8TE49 926 aaPredicted RBP18.32■□□□□ 0.52
RAB3IP-203ENST00000378809 CARD10Q9BWT7 1032 aa18.32■□□□□ 0.52
RAB3IP-203ENST00000378809 C22orf23Q9BZE7 217 aa18.32■□□□□ 0.52
RAB3IP-203ENST00000378809 PKD1L3Q7Z443 1732 aa18.32■□□□□ 0.52
RAB3IP-203ENST00000378809 MYL6BP14649 208 aa18.32■□□□□ 0.52
RAB3IP-203ENST00000378809 NBR1Q14596 966 aa18.32■□□□□ 0.52
RAB3IP-203ENST00000378809 DDX21Q9NR30 783 aaKnown RBP eCLIP18.32■□□□□ 0.52
RAB3IP-203ENST00000378809 KSR2Q6VAB6 950 aa18.31■□□□□ 0.52
RAB3IP-203ENST00000378809 DDX54Q8TDD1 881 aaKnown RBP18.31■□□□□ 0.52
RAB3IP-203ENST00000378809 ABCA3Q99758 1704 aa18.31■□□□□ 0.52
RAB3IP-203ENST00000378809 DDX58O95786 925 aaKnown RBP18.3■□□□□ 0.52
RAB3IP-203ENST00000378809 NBPF7P0C2Y1 421 aaPredicted RBP18.3■□□□□ 0.52
RAB3IP-203ENST00000378809 GSPT1P15170 499 aaKnown RBP18.3■□□□□ 0.52
RAB3IP-203ENST00000378809 TTC22Q5TAA0 569 aa18.3■□□□□ 0.52
RAB3IP-203ENST00000378809 FMNL2Q96PY5 1086 aa18.3■□□□□ 0.52
RAB3IP-203ENST00000378809 MRC1P22897 1456 aa18.29■□□□□ 0.52
RAB3IP-203ENST00000378809 SNRPA1P09661 255 aaKnown RBP18.29■□□□□ 0.52
RAB3IP-203ENST00000378809 BECN1Q14457 450 aa18.29■□□□□ 0.52
RAB3IP-203ENST00000378809 LRRCC1Q9C099 1032 aa18.29■□□□□ 0.52
RAB3IP-203ENST00000378809 N4BP2Q86UW6 1770 aaPredicted RBP18.29■□□□□ 0.52
RAB3IP-203ENST00000378809 PARP4Q9UKK3 1724 aaKnown RBP18.28■□□□□ 0.52
RAB3IP-203ENST00000378809 TBC1D9Q6ZT07 1266 aa18.28■□□□□ 0.52
RAB3IP-203ENST00000378809 BTG4Q9NY30 223 aa18.28■□□□□ 0.52
RAB3IP-203ENST00000378809 C9orf78Q9NZ63 289 aaPredicted RBP18.28■□□□□ 0.52
RAB3IP-203ENST00000378809 CDC45O75419 566 aa18.28■□□□□ 0.52
RAB3IP-203ENST00000378809 PDIA6Q15084 440 aa18.28■□□□□ 0.52
RAB3IP-203ENST00000378809 SRGAP3O43295 1099 aa18.27■□□□□ 0.52
RAB3IP-203ENST00000378809 CWF19L2Q2TBE0 894 aaKnown RBP18.27■□□□□ 0.52
RAB3IP-203ENST00000378809 PPP1R42Q7Z4L9 355 aa18.27■□□□□ 0.52
RAB3IP-203ENST00000378809 RIC3Q7Z5B4 369 aa18.27■□□□□ 0.52
RAB3IP-203ENST00000378809 USP16Q9Y5T5 823 aa18.27■□□□□ 0.52
RAB3IP-203ENST00000378809 PIP4K2AP48426 406 aaPredicted RBP18.26■□□□□ 0.51
RAB3IP-203ENST00000378809 IBTKQ9P2D0 1353 aaPredicted RBP18.26■□□□□ 0.51
RAB3IP-203ENST00000378809 ALDH1L1O75891 902 aa18.25■□□□□ 0.51
RAB3IP-203ENST00000378809 SSH3Q8TE77 659 aa18.25■□□□□ 0.51
RAB3IP-203ENST00000378809 XAGE3Q8WTP9 111 aa18.25■□□□□ 0.51
RAB3IP-203ENST00000378809 C5P01031 1676 aa18.25■□□□□ 0.51
RAB3IP-203ENST00000378809 SURF6O75683 361 aaKnown RBP18.24■□□□□ 0.51
RAB3IP-203ENST00000378809 COPS6Q7L5N1 327 aa18.24■□□□□ 0.51
RAB3IP-203ENST00000378809 LINS1Q8NG48 757 aa18.24■□□□□ 0.51
RAB3IP-203ENST00000378809 ROBO1Q9Y6N7 1651 aa18.24■□□□□ 0.51
RAB3IP-203ENST00000378809 ERVV-2B6SEH9 535 aa18.23■□□□□ 0.51
RAB3IP-203ENST00000378809 SDSP20132 328 aa18.23■□□□□ 0.51
RAB3IP-203ENST00000378809 PDE1AP54750 535 aa18.23■□□□□ 0.51
RAB3IP-203ENST00000378809 NEXNQ0ZGT2 675 aa18.23■□□□□ 0.51
RAB3IP-203ENST00000378809 TSHZ3Q63HK5 1081 aa18.22■□□□□ 0.51
RAB3IP-203ENST00000378809 POLA2Q14181 598 aa18.22■□□□□ 0.51
RAB3IP-203ENST00000378809 CASC1Q6TDU7 716 aa18.22■□□□□ 0.51
RAB3IP-203ENST00000378809 IL1RAPL2Q9NP60 686 aa18.22■□□□□ 0.51
RAB3IP-203ENST00000378809 HDAC5Q9UQL6 1122 aa18.22■□□□□ 0.51
RAB3IP-203ENST00000378809 GRM8O00222 908 aa18.21■□□□□ 0.51
RAB3IP-203ENST00000378809 PTCD1O75127 700 aaKnown RBP18.21■□□□□ 0.51
RAB3IP-203ENST00000378809 MX1P20591 662 aa18.21■□□□□ 0.51
RAB3IP-203ENST00000378809 NKX1-1Q15270 411 aaPredicted RBP18.21■□□□□ 0.51
RAB3IP-203ENST00000378809 RAB11FIP3O75154 756 aa18.2■□□□□ 0.5
RAB3IP-203ENST00000378809 MYD88Q99836 296 aa18.2■□□□□ 0.5
RAB3IP-203ENST00000378809 RBM25P49756 843 aaKnown RBP18.2■□□□□ 0.5
RAB3IP-203ENST00000378809 OS9Q13438 667 aaPredicted RBP18.2■□□□□ 0.5
RAB3IP-203ENST00000378809 ANKRD13DQ6ZTN6 518 aa18.2■□□□□ 0.5
RAB3IP-203ENST00000378809 TBC1D2Q9BYX2 928 aa18.2■□□□□ 0.5
RAB3IP-203ENST00000378809 OSBPL3Q9H4L5 887 aa18.2■□□□□ 0.5
RAB3IP-203ENST00000378809 EIF5BO60841 1220 aaKnown RBP18.18■□□□□ 0.5
RAB3IP-203ENST00000378809 IGKV5-2P06315 115 aa18.18■□□□□ 0.5
RAB3IP-203ENST00000378809 RTL5Q5HYW3 569 aaPredicted RBP18.18■□□□□ 0.5
RAB3IP-203ENST00000378809 TMOD3Q9NYL9 352 aa18.18■□□□□ 0.5
RAB3IP-203ENST00000378809 RHPN1Q8TCX5 695 aa18.18■□□□□ 0.5
RAB3IP-203ENST00000378809 METTL22Q9BUU2 404 aaPredicted RBP18.18■□□□□ 0.5
RAB3IP-203ENST00000378809 NEURL1BA8MQ27 555 aa18.17■□□□□ 0.5
RAB3IP-203ENST00000378809 HSP90AB4PQ58FF6 505 aa18.17■□□□□ 0.5
RAB3IP-203ENST00000378809 LRP10Q7Z4F1 713 aa18.17■□□□□ 0.5
RAB3IP-203ENST00000378809 KIF1BPQ96EK5 621 aa18.17■□□□□ 0.5
RAB3IP-203ENST00000378809 SUCLG2Q96I99 432 aa18.17■□□□□ 0.5
RAB3IP-203ENST00000378809 AHDC1Q5TGY3 1603 aaPredicted RBP18.17■□□□□ 0.5
RAB3IP-203ENST00000378809 ADAMTS2O95450 1211 aa18.16■□□□□ 0.5
RAB3IP-203ENST00000378809 NUTM1Q86Y26 1132 aa18.16■□□□□ 0.5
RAB3IP-203ENST00000378809 SALL3Q9BXA9 1300 aa18.16■□□□□ 0.5
RAB3IP-203ENST00000378809 MTX1Q13505 466 aa18.16■□□□□ 0.5
RAB3IP-203ENST00000378809 SLKQ9H2G2 1235 aaPredicted RBP18.16■□□□□ 0.5
RAB3IP-203ENST00000378809 BICC1Q9H694 974 aaKnown RBP18.16■□□□□ 0.5
RAB3IP-203ENST00000378809 TRIM6-TRIM34B2RNG4 842 aa18.15■□□□□ 0.5
RAB3IP-203ENST00000378809 PIP4K2BP78356 416 aa18.15■□□□□ 0.5
RAB3IP-203ENST00000378809 LTBP4Q8N2S1 1624 aa18.15■□□□□ 0.5
RAB3IP-203ENST00000378809 GCKRQ14397 625 aa18.15■□□□□ 0.5
RAB3IP-203ENST00000378809 RILPL2Q969X0 211 aa18.15■□□□□ 0.5
RAB3IP-203ENST00000378809 COL14A1Q05707 1796 aaKnown RBP18.15■□□□□ 0.5
RAB3IP-203ENST00000378809 UTYO14607 1347 aa18.14■□□□□ 0.49
RAB3IP-203ENST00000378809 HSCBQ8IWL3 235 aa18.14■□□□□ 0.49
RAB3IP-203ENST00000378809 PA2G4Q9UQ80 394 aaKnown RBP18.14■□□□□ 0.49
RAB3IP-203ENST00000378809 SHANK3Q9BYB0 1731 aa18.14■□□□□ 0.49
RAB3IP-203ENST00000378809 ERBB4Q15303 1308 aa18.13■□□□□ 0.49
RAB3IP-203ENST00000378809 ATP5J2-PTCD1G3V325 749 aa18.13■□□□□ 0.49
RAB3IP-203ENST00000378809 A1BGP04217 495 aa18.13■□□□□ 0.49
RAB3IP-203ENST00000378809 SPRYD3Q8NCJ5 442 aa18.13■□□□□ 0.49
RAB3IP-203ENST00000378809 GLI3P10071 1580 aa18.13■□□□□ 0.49
RAB3IP-203ENST00000378809 NBPF26B4DH59 902 aa18.13■□□□□ 0.49
RAB3IP-203ENST00000378809 NBPF14Q5TI25 921 aa18.13■□□□□ 0.49
RAB3IP-203ENST00000378809 NBPF10Q6P3W6 841 aaKnown RBP18.13■□□□□ 0.49
RAB3IP-203ENST00000378809 NBPF15Q8N660 670 aa18.13■□□□□ 0.49
RAB3IP-203ENST00000378809 PLBD2Q8NHP8 589 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms