RNA–Protein interactions for RNA: ENST00000378702.8

DMD-209, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 2,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-209ENST00000378702 LRRC8AQ8IWT6 810 aa12.2□□□□□ -0.46
DMD-209ENST00000378702 CCDC144CPQ8IYA2 1237 aa12.2□□□□□ -0.46
DMD-209ENST00000378702 DRC1Q96MC2 740 aa12.2□□□□□ -0.46
DMD-209ENST00000378702 DONSONQ9NYP3 566 aa12.2□□□□□ -0.46
DMD-209ENST00000378702 ABCC4O15439 1325 aa12.19□□□□□ -0.46
DMD-209ENST00000378702 ADAMTS12P58397 1594 aa12.19□□□□□ -0.46
DMD-209ENST00000378702 FIBPO43427 364 aa12.19□□□□□ -0.46
DMD-209ENST00000378702 TYRO3Q06418 890 aa12.19□□□□□ -0.46
DMD-209ENST00000378702 TMCO3Q6UWJ1 677 aa12.19□□□□□ -0.46
DMD-209ENST00000378702 GPATCH11Q8N954 259 aa12.19□□□□□ -0.46
DMD-209ENST00000378702 TDRD7Q8NHU6 1098 aaKnown RBP12.19□□□□□ -0.46
DMD-209ENST00000378702 ARGLU1Q9NWB6 273 aaPredicted RBP12.19□□□□□ -0.46
DMD-209ENST00000378702 CLIP2Q9UDT6 1046 aa12.19□□□□□ -0.46
DMD-209ENST00000378702 PLEKHF1Q96S99 279 aa12.19□□□□□ -0.46
DMD-209ENST00000378702 CBX8Q9HC52 389 aa12.19□□□□□ -0.46
DMD-209ENST00000378702 NPHP1O15259 732 aa12.18□□□□□ -0.46
DMD-209ENST00000378702 GSCP56915 257 aaPredicted RBP12.18□□□□□ -0.46
DMD-209ENST00000378702 SWT1Q5T5J6 900 aaKnown RBP12.18□□□□□ -0.46
DMD-209ENST00000378702 FILIP1Q7Z7B0 1213 aa12.18□□□□□ -0.46
DMD-209ENST00000378702 SUGP1Q8IWZ8 645 aaKnown RBP12.18□□□□□ -0.46
DMD-209ENST00000378702 REXO1L1PQ8IX06 675 aa12.18□□□□□ -0.46
DMD-209ENST00000378702 OTUD7AQ8TE49 926 aaPredicted RBP12.18□□□□□ -0.46
DMD-209ENST00000378702 AK7Q96M32 723 aa12.18□□□□□ -0.46
DMD-209ENST00000378702 DEF6Q9H4E7 631 aa12.18□□□□□ -0.46
DMD-209ENST00000378702 ATP6V1DQ9Y5K8 247 aa12.18□□□□□ -0.46
DMD-209ENST00000378702 PTPRTO14522 1441 aa12.18□□□□□ -0.46
DMD-209ENST00000378702 OAS2P29728 719 aaKnown RBP12.18□□□□□ -0.46
DMD-209ENST00000378702 MAP3K11Q16584 847 aa12.18□□□□□ -0.46
DMD-209ENST00000378702 CCDC93Q567U6 631 aa12.18□□□□□ -0.46
DMD-209ENST00000378702 CCDC91Q7Z6B0 441 aa12.18□□□□□ -0.46
DMD-209ENST00000378702 EXOC4Q96A65 974 aa12.18□□□□□ -0.46
DMD-209ENST00000378702 F13A1P00488 732 aa12.17□□□□□ -0.46
DMD-209ENST00000378702 MCCP23508 829 aa12.17□□□□□ -0.46
DMD-209ENST00000378702 TPRNQ4KMQ1 711 aa12.17□□□□□ -0.46
DMD-209ENST00000378702 ARHGAP29Q52LW3 1261 aa12.17□□□□□ -0.46
DMD-209ENST00000378702 NOL8Q76FK4 1167 aaKnown RBP12.17□□□□□ -0.46
DMD-209ENST00000378702 CCAR2Q8N163 923 aaKnown RBP12.17□□□□□ -0.46
DMD-209ENST00000378702 CEP120Q8N960 986 aa12.17□□□□□ -0.46
DMD-209ENST00000378702 MYO3AQ8NEV4 1616 aa12.17□□□□□ -0.46
DMD-209ENST00000378702 KIF1CO43896 1103 aaKnown RBP12.17□□□□□ -0.46
DMD-209ENST00000378702 CXorf56Q9H5V9 222 aa12.17□□□□□ -0.46
DMD-209ENST00000378702 PALD1Q9ULE6 856 aa12.17□□□□□ -0.46
DMD-209ENST00000378702 ACTN2P35609 894 aa12.16□□□□□ -0.46
DMD-209ENST00000378702 INO80Q9ULG1 1556 aaPredicted RBP12.16□□□□□ -0.46
DMD-209ENST00000378702 MAST1Q9Y2H9 1570 aa12.16□□□□□ -0.46
DMD-209ENST00000378702 SBNO2Q9Y2G9 1366 aa12.16□□□□□ -0.46
DMD-209ENST00000378702 STX6O43752 255 aa12.16□□□□□ -0.46
DMD-209ENST00000378702 SATB1Q01826 763 aa12.16□□□□□ -0.46
DMD-209ENST00000378702 SART3Q15020 963 aaKnown RBP12.16□□□□□ -0.46
DMD-209ENST00000378702 MRPL50Q8N5N7 158 aaKnown RBP12.16□□□□□ -0.46
DMD-209ENST00000378702 LRRN4CLQ8ND94 238 aa12.16□□□□□ -0.46
DMD-209ENST00000378702 FAM135BQ49AJ0 1406 aa12.16□□□□□ -0.46
DMD-209ENST00000378702 IVLP07476 585 aa12.15□□□□□ -0.46
DMD-209ENST00000378702 SKILP12757 684 aa12.15□□□□□ -0.46
DMD-209ENST00000378702 HNRNPMP52272 730 aaKnown RBP eCLIP12.15□□□□□ -0.46
DMD-209ENST00000378702 ANO6Q4KMQ2 910 aa12.15□□□□□ -0.46
DMD-209ENST00000378702 NUP62CLQ9H1M0 184 aa12.15□□□□□ -0.46
DMD-209ENST00000378702 ORC3Q9UBD5 711 aaPredicted RBP12.15□□□□□ -0.46
DMD-209ENST00000378702 KIF24Q5T7B8 1368 aa12.15□□□□□ -0.46
DMD-209ENST00000378702 SYT1P21579 422 aa12.15□□□□□ -0.46
DMD-209ENST00000378702 CCZ1BP86790 482 aa12.15□□□□□ -0.46
DMD-209ENST00000378702 CCZ1P86791 482 aaPredicted RBP12.15□□□□□ -0.46
DMD-209ENST00000378702 ZCCHC17Q9NP64 241 aaKnown RBP12.15□□□□□ -0.46
DMD-209ENST00000378702 MED4Q9NPJ6 270 aa12.15□□□□□ -0.46
DMD-209ENST00000378702 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.15□□□□□ -0.46
DMD-209ENST00000378702 CASTP20810 708 aaKnown RBP12.14□□□□□ -0.47
DMD-209ENST00000378702 SMC1AQ14683 1233 aaKnown RBP12.14□□□□□ -0.47
DMD-209ENST00000378702 PPM1EQ8WY54 764 aa12.14□□□□□ -0.47
DMD-209ENST00000378702 SSH2Q76I76 1423 aa12.14□□□□□ -0.47
DMD-209ENST00000378702 TUBGCP6Q96RT7 1819 aa12.14□□□□□ -0.47
DMD-209ENST00000378702 TBC1D8O95759 1140 aa12.14□□□□□ -0.47
DMD-209ENST00000378702 SARM1Q6SZW1 724 aa12.14□□□□□ -0.47
DMD-209ENST00000378702 EGFL6Q8IUX8 553 aa12.14□□□□□ -0.47
DMD-209ENST00000378702 MNS1Q8NEH6 495 aa12.14□□□□□ -0.47
DMD-209ENST00000378702 ATP10DQ9P241 1426 aa12.14□□□□□ -0.47
DMD-209ENST00000378702 SASH3O75995 380 aa12.13□□□□□ -0.47
DMD-209ENST00000378702 MCTP2Q6DN12 878 aa12.13□□□□□ -0.47
DMD-209ENST00000378702 RBM43Q6ZSC3 357 aaKnown RBP12.13□□□□□ -0.47
DMD-209ENST00000378702 MRFAP1L1Q96HT8 127 aa12.13□□□□□ -0.47
DMD-209ENST00000378702 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.13□□□□□ -0.47
DMD-209ENST00000378702 ESYT1Q9BSJ8 1104 aa12.13□□□□□ -0.47
DMD-209ENST00000378702 TRMT1Q9NXH9 659 aaKnown RBP12.13□□□□□ -0.47
DMD-209ENST00000378702 CDC42BPBQ9Y5S2 1711 aa12.13□□□□□ -0.47
DMD-209ENST00000378702 RPS6KA5O75582 802 aa12.13□□□□□ -0.47
DMD-209ENST00000378702 CPP00450 1065 aa12.13□□□□□ -0.47
DMD-209ENST00000378702 ARID5BQ14865 1188 aa12.13□□□□□ -0.47
DMD-209ENST00000378702 CEP89Q96ST8 783 aa12.13□□□□□ -0.47
DMD-209ENST00000378702 OSBPL3Q9H4L5 887 aa12.13□□□□□ -0.47
DMD-209ENST00000378702 ADAM21Q9UKJ8 722 aa12.13□□□□□ -0.47
DMD-209ENST00000378702 TARBP1Q13395 1621 aaKnown RBP12.13□□□□□ -0.47
DMD-209ENST00000378702 EIF3CLB5ME19 914 aaKnown RBP12.12□□□□□ -0.47
DMD-209ENST00000378702 LMAN1P49257 510 aa12.12□□□□□ -0.47
DMD-209ENST00000378702 DNM1Q05193 864 aaKnown RBP12.12□□□□□ -0.47
DMD-209ENST00000378702 SNW1Q13573 536 aaKnown RBP12.12□□□□□ -0.47
DMD-209ENST00000378702 EIF3CQ99613 913 aaKnown RBP12.12□□□□□ -0.47
DMD-209ENST00000378702 CCDC69A6NI79 296 aa12.12□□□□□ -0.47
DMD-209ENST00000378702 TUBB4AP04350 444 aa12.12□□□□□ -0.47
DMD-209ENST00000378702 ANKRD44Q8N8A2 993 aa12.12□□□□□ -0.47
DMD-209ENST00000378702 UBXN4Q92575 508 aa12.12□□□□□ -0.47
DMD-209ENST00000378702 UPF3BQ9BZI7 483 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms