RNA–Protein interactions for RNA: ENST00000378206.5

DFFB-204, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-204ENST00000378206 SSH3Q8TE77 659 aa18.37■□□□□ 0.53
DFFB-204ENST00000378206 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.37■□□□□ 0.53
DFFB-204ENST00000378206 NALCNQ8IZF0 1738 aa18.37■□□□□ 0.53
DFFB-204ENST00000378206 CWC27Q6UX04 472 aaKnown RBP18.36■□□□□ 0.53
DFFB-204ENST00000378206 PRKCSHP14314 528 aaPredicted RBP18.36■□□□□ 0.53
DFFB-204ENST00000378206 ZSCAN23Q3MJ62 389 aa18.36■□□□□ 0.53
DFFB-204ENST00000378206 BEND3Q5T5X7 828 aa18.36■□□□□ 0.53
DFFB-204ENST00000378206 DNAAF4Q8WXU2 420 aa18.36■□□□□ 0.53
DFFB-204ENST00000378206 NWD1Q149M9 1564 aa18.36■□□□□ 0.53
DFFB-204ENST00000378206 NASPP49321 788 aaPredicted RBP18.36■□□□□ 0.53
DFFB-204ENST00000378206 PRIM1P49642 420 aaKnown RBP18.36■□□□□ 0.53
DFFB-204ENST00000378206 OS9Q13438 667 aaPredicted RBP18.36■□□□□ 0.53
DFFB-204ENST00000378206 CLEC17AQ6ZS10 378 aa18.36■□□□□ 0.53
DFFB-204ENST00000378206 PIP4K2AP48426 406 aaPredicted RBP18.35■□□□□ 0.53
DFFB-204ENST00000378206 JARID2Q92833 1246 aaPredicted RBP18.35■□□□□ 0.53
DFFB-204ENST00000378206 DDX17Q92841 729 aaKnown RBP18.35■□□□□ 0.53
DFFB-204ENST00000378206 GCP02774 474 aa18.34■□□□□ 0.53
DFFB-204ENST00000378206 ZC3H6P61129 1189 aaKnown RBP18.34■□□□□ 0.53
DFFB-204ENST00000378206 SLC39A6Q13433 755 aa18.34■□□□□ 0.53
DFFB-204ENST00000378206 RASEFQ8IZ41 740 aa18.34■□□□□ 0.53
DFFB-204ENST00000378206 PI4K2BQ8TCG2 481 aa18.34■□□□□ 0.53
DFFB-204ENST00000378206 TRIM44Q96DX7 344 aaPredicted RBP18.34■□□□□ 0.53
DFFB-204ENST00000378206 STAP2Q9UGK3 403 aa18.34■□□□□ 0.53
DFFB-204ENST00000378206 ARHGAP23Q9P227 1491 aa18.34■□□□□ 0.53
DFFB-204ENST00000378206 ESPNB1AK53 854 aa18.34■□□□□ 0.53
DFFB-204ENST00000378206 RBSNQ9H1K0 784 aa18.34■□□□□ 0.53
DFFB-204ENST00000378206 CWC22Q9HCG8 908 aaKnown RBP18.34■□□□□ 0.53
DFFB-204ENST00000378206 MAP3K2Q9Y2U5 619 aa18.34■□□□□ 0.53
DFFB-204ENST00000378206 TMEM63CQ9P1W3 806 aa18.33■□□□□ 0.53
DFFB-204ENST00000378206 NAP1L5Q96NT1 182 aaPredicted RBP18.33■□□□□ 0.52
DFFB-204ENST00000378206 SYCE3A1L190 88 aa18.32■□□□□ 0.52
DFFB-204ENST00000378206 ANKLE2Q86XL3 938 aa18.32■□□□□ 0.52
DFFB-204ENST00000378206 KLHDC4Q8TBB5 520 aa18.32■□□□□ 0.52
DFFB-204ENST00000378206 COL9A3Q14050 684 aaPredicted RBP18.31■□□□□ 0.52
DFFB-204ENST00000378206 RNF214Q8ND24 703 aa18.31■□□□□ 0.52
DFFB-204ENST00000378206 C9orf78Q9NZ63 289 aaPredicted RBP18.31■□□□□ 0.52
DFFB-204ENST00000378206 SLIT1O75093 1534 aa18.31■□□□□ 0.52
DFFB-204ENST00000378206 POLA2Q14181 598 aa18.31■□□□□ 0.52
DFFB-204ENST00000378206 SIL1Q9H173 461 aa18.3■□□□□ 0.52
DFFB-204ENST00000378206 CEMIPQ8WUJ3 1361 aa18.3■□□□□ 0.52
DFFB-204ENST00000378206 FMN2Q9NZ56 1722 aa18.3■□□□□ 0.52
DFFB-204ENST00000378206 ADCY9O60503 1353 aa18.3■□□□□ 0.52
DFFB-204ENST00000378206 MCCP23508 829 aa18.3■□□□□ 0.52
DFFB-204ENST00000378206 RNMTO43148 476 aaKnown RBP18.29■□□□□ 0.52
DFFB-204ENST00000378206 GADD45BO75293 160 aaPredicted RBP18.29■□□□□ 0.52
DFFB-204ENST00000378206 ANKRD24Q8TF21 1146 aa18.29■□□□□ 0.52
DFFB-204ENST00000378206 MYL6BP14649 208 aa18.29■□□□□ 0.52
DFFB-204ENST00000378206 CLCN1P35523 988 aa18.29■□□□□ 0.52
DFFB-204ENST00000378206 KIF1BPQ96EK5 621 aa18.29■□□□□ 0.52
DFFB-204ENST00000378206 GIGYF1O75420 1035 aaPredicted RBP18.28■□□□□ 0.52
DFFB-204ENST00000378206 C1orf141Q5JVX7 400 aa18.28■□□□□ 0.52
DFFB-204ENST00000378206 PLEKHO1Q53GL0 409 aaPredicted RBP18.28■□□□□ 0.52
DFFB-204ENST00000378206 MPNDQ8N594 471 aa18.28■□□□□ 0.52
DFFB-204ENST00000378206 PTH1RQ03431 593 aa18.27■□□□□ 0.52
DFFB-204ENST00000378206 AKAP4Q5JQC9 854 aa18.27■□□□□ 0.52
DFFB-204ENST00000378206 CCDC8Q9H0W5 538 aaPredicted RBP18.27■□□□□ 0.52
DFFB-204ENST00000378206 SNX14Q9Y5W7 946 aa18.27■□□□□ 0.52
DFFB-204ENST00000378206 SGSM2O43147 1006 aa18.27■□□□□ 0.52
DFFB-204ENST00000378206 BRD1O95696 1058 aa18.27■□□□□ 0.51
DFFB-204ENST00000378206 HSPA4P34932 840 aa18.27■□□□□ 0.51
DFFB-204ENST00000378206 ADCK5Q3MIX3 580 aa18.26■□□□□ 0.51
DFFB-204ENST00000378206 ARHGEF25Q86VW2 580 aa18.26■□□□□ 0.51
DFFB-204ENST00000378206 CABLES1Q8TDN4 633 aa18.26■□□□□ 0.51
DFFB-204ENST00000378206 DBF4Q9UBU7 674 aaPredicted RBP18.26■□□□□ 0.51
DFFB-204ENST00000378206 CUL4AQ13619 759 aa18.26■□□□□ 0.51
DFFB-204ENST00000378206 RAB11FIP3O75154 756 aa18.25■□□□□ 0.51
DFFB-204ENST00000378206 LARGE1O95461 756 aa18.25■□□□□ 0.51
DFFB-204ENST00000378206 PTMSP20962 102 aa18.25■□□□□ 0.51
DFFB-204ENST00000378206 ANKARQ7Z5J8 1434 aa18.25■□□□□ 0.51
DFFB-204ENST00000378206 AK2P54819 239 aa18.25■□□□□ 0.51
DFFB-204ENST00000378206 KAZALD1Q96I82 304 aa18.25■□□□□ 0.51
DFFB-204ENST00000378206 LSG1Q9H089 658 aaKnown RBP18.25■□□□□ 0.51
DFFB-204ENST00000378206 TLR7Q9NYK1 1049 aaKnown RBP18.25■□□□□ 0.51
DFFB-204ENST00000378206 ISY1Q9ULR0 285 aaKnown RBP18.25■□□□□ 0.51
DFFB-204ENST00000378206 NDUFB9Q9Y6M9 179 aa18.25■□□□□ 0.51
DFFB-204ENST00000378206 PXDNQ92626 1479 aa18.25■□□□□ 0.51
DFFB-204ENST00000378206 TCEANC2Q96MN5 208 aa18.24■□□□□ 0.51
DFFB-204ENST00000378206 BABAM1Q9NWV8 329 aa18.24■□□□□ 0.51
DFFB-204ENST00000378206 ZNF445P59923 1031 aa18.24■□□□□ 0.51
DFFB-204ENST00000378206 AACSQ86V21 672 aa18.24■□□□□ 0.51
DFFB-204ENST00000378206 SUCLG2Q96I99 432 aa18.24■□□□□ 0.51
DFFB-204ENST00000378206 CCDC9Q9Y3X0 531 aaKnown RBP18.24■□□□□ 0.51
DFFB-204ENST00000378206 XRN1Q8IZH2 1706 aaKnown RBP18.23■□□□□ 0.51
DFFB-204ENST00000378206 KCNH5Q8NCM2 988 aa18.23■□□□□ 0.51
DFFB-204ENST00000378206 EDC3Q96F86 508 aaKnown RBP18.23■□□□□ 0.51
DFFB-204ENST00000378206 CHGBP05060 677 aa18.23■□□□□ 0.51
DFFB-204ENST00000378206 CASTP20810 708 aaKnown RBP18.23■□□□□ 0.51
DFFB-204ENST00000378206 PRPF40BQ6NWY9 871 aaKnown RBP18.23■□□□□ 0.51
DFFB-204ENST00000378206 RUFY3Q7L099 469 aa18.23■□□□□ 0.51
DFFB-204ENST00000378206 CNTROBQ8N137 903 aa18.23■□□□□ 0.51
DFFB-204ENST00000378206 CLASRPQ8N2M8 674 aaKnown RBP18.23■□□□□ 0.51
DFFB-204ENST00000378206 NFATC2IPQ8NCF5 419 aa18.23■□□□□ 0.51
DFFB-204ENST00000378206 FAM227BQ96M60 508 aa18.23■□□□□ 0.51
DFFB-204ENST00000378206 BICC1Q9H694 974 aaKnown RBP18.23■□□□□ 0.51
DFFB-204ENST00000378206 KIAA1211Q6ZU35 1233 aa18.22■□□□□ 0.51
DFFB-204ENST00000378206 NLRP2Q9NX02 1062 aa18.22■□□□□ 0.51
DFFB-204ENST00000378206 ANAPC15P60006 121 aa18.22■□□□□ 0.51
DFFB-204ENST00000378206 KSR2Q6VAB6 950 aa18.22■□□□□ 0.51
DFFB-204ENST00000378206 EAF2Q96CJ1 260 aaPredicted RBP18.22■□□□□ 0.51
DFFB-204ENST00000378206 KRT28Q7Z3Y7 464 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms