RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 PLA2R1Q13018 1463 aa15.65■□□□□ 0.1
NPHP4-203ENST00000378169 TPM3P06753 285 aa15.65■□□□□ 0.1
NPHP4-203ENST00000378169 ZSCAN31Q96LW9 406 aaPredicted RBP15.65■□□□□ 0.1
NPHP4-203ENST00000378169 DCTPP1Q9H773 170 aa15.65■□□□□ 0.1
NPHP4-203ENST00000378169 LRP2BPQ9P2M1 347 aa15.65■□□□□ 0.1
NPHP4-203ENST00000378169 KRT32Q14532 448 aa15.65■□□□□ 0.1
NPHP4-203ENST00000378169 R3HCC1Q9Y3T6 440 aaKnown RBP15.65■□□□□ 0.1
NPHP4-203ENST00000378169 ZFYVE9O95405 1425 aa15.65■□□□□ 0.1
NPHP4-203ENST00000378169 AKAP4Q5JQC9 854 aa15.65■□□□□ 0.1
NPHP4-203ENST00000378169 TTC37Q6PGP7 1564 aa15.64■□□□□ 0.09
NPHP4-203ENST00000378169 HOMER1Q86YM7 354 aa15.64■□□□□ 0.09
NPHP4-203ENST00000378169 TCEANC2Q96MN5 208 aa15.64■□□□□ 0.09
NPHP4-203ENST00000378169 GNL3LQ9NVN8 582 aaKnown RBP15.64■□□□□ 0.09
NPHP4-203ENST00000378169 TDO2P48775 406 aa15.64■□□□□ 0.09
NPHP4-203ENST00000378169 OTUD7AQ8TE49 926 aaPredicted RBP15.64■□□□□ 0.09
NPHP4-203ENST00000378169 SPATA32Q96LK8 384 aa15.64■□□□□ 0.09
NPHP4-203ENST00000378169 NACAP1Q9BZK3 213 aa15.64■□□□□ 0.09
NPHP4-203ENST00000378169 HOOK1Q9UJC3 728 aaKnown RBP15.64■□□□□ 0.09
NPHP4-203ENST00000378169 GOLIM4O00461 696 aa15.64■□□□□ 0.09
NPHP4-203ENST00000378169 ATP8B2P98198 1209 aa15.64■□□□□ 0.09
NPHP4-203ENST00000378169 RAI14Q9P0K7 980 aa15.64■□□□□ 0.09
NPHP4-203ENST00000378169 XBP1P17861 261 aa15.63■□□□□ 0.09
NPHP4-203ENST00000378169 TNMDQ9H2S6 317 aa15.63■□□□□ 0.09
NPHP4-203ENST00000378169 CTNNA3Q9UI47 895 aa15.63■□□□□ 0.09
NPHP4-203ENST00000378169 ERCC6L2Q5T890 1561 aa15.63■□□□□ 0.09
NPHP4-203ENST00000378169 ADGBQ8N7X0 1667 aa15.63■□□□□ 0.09
NPHP4-203ENST00000378169 EXOC5O00471 708 aa15.63■□□□□ 0.09
NPHP4-203ENST00000378169 TSR1Q2NL82 804 aaKnown RBP15.63■□□□□ 0.09
NPHP4-203ENST00000378169 C19orf44Q9H6X5 657 aa15.63■□□□□ 0.09
NPHP4-203ENST00000378169 BLMP54132 1417 aaPredicted RBP15.63■□□□□ 0.09
NPHP4-203ENST00000378169 ZMYM4Q5VZL5 1548 aa15.63■□□□□ 0.09
NPHP4-203ENST00000378169 GRM8O00222 908 aa15.62■□□□□ 0.09
NPHP4-203ENST00000378169 DDX46Q7L014 1031 aaKnown RBP15.62■□□□□ 0.09
NPHP4-203ENST00000378169 AIDAQ96BJ3 306 aa15.62■□□□□ 0.09
NPHP4-203ENST00000378169 LIMCH1Q9UPQ0 1083 aa15.62■□□□□ 0.09
NPHP4-203ENST00000378169 NPHP3Q7Z494 1330 aa15.62■□□□□ 0.09
NPHP4-203ENST00000378169 KDM2BQ8NHM5 1336 aa15.62■□□□□ 0.09
NPHP4-203ENST00000378169 ZNF396Q96N95 335 aaPredicted RBP15.62■□□□□ 0.09
NPHP4-203ENST00000378169 IGHMBP2P38935 993 aaKnown RBP15.62■□□□□ 0.09
NPHP4-203ENST00000378169 GUCY1B3Q02153 619 aa15.62■□□□□ 0.09
NPHP4-203ENST00000378169 LDHAL6AQ6ZMR3 332 aa15.62■□□□□ 0.09
NPHP4-203ENST00000378169 PLEKHM2Q8IWE5 1019 aa15.62■□□□□ 0.09
NPHP4-203ENST00000378169 EDC4Q6P2E9 1401 aaKnown RBP15.61■□□□□ 0.09
NPHP4-203ENST00000378169 TPM1P09493 284 aa15.61■□□□□ 0.09
NPHP4-203ENST00000378169 KSR2Q6VAB6 950 aa15.61■□□□□ 0.09
NPHP4-203ENST00000378169 KLHL34Q8N239 644 aa15.61■□□□□ 0.09
NPHP4-203ENST00000378169 EVI5LQ96CN4 794 aa15.61■□□□□ 0.09
NPHP4-203ENST00000378169 PCMTD1Q96MG8 357 aaPredicted RBP15.61■□□□□ 0.09
NPHP4-203ENST00000378169 CCDC39Q9UFE4 941 aa15.61■□□□□ 0.09
NPHP4-203ENST00000378169 CCDC173Q0VFZ6 552 aa15.61■□□□□ 0.09
NPHP4-203ENST00000378169 ZSCAN25Q6NSZ9 544 aa15.61■□□□□ 0.09
NPHP4-203ENST00000378169 CCDC192P0DO97 292 aa15.61■□□□□ 0.09
NPHP4-203ENST00000378169 PDE4CQ08493 712 aa15.61■□□□□ 0.09
NPHP4-203ENST00000378169 IMMTQ16891 758 aaKnown RBP15.61■□□□□ 0.09
NPHP4-203ENST00000378169 LGR6Q9HBX8 967 aa15.61■□□□□ 0.09
NPHP4-203ENST00000378169 U3KPZ7 1027 aaPredicted RBP15.61■□□□□ 0.09
NPHP4-203ENST00000378169 CHL1O00533 1208 aa15.6■□□□□ 0.09
NPHP4-203ENST00000378169 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.6■□□□□ 0.09
NPHP4-203ENST00000378169 AEBP2Q6ZN18 517 aaPredicted RBP15.6■□□□□ 0.09
NPHP4-203ENST00000378169 CCDC82Q8N4S0 544 aa15.6■□□□□ 0.09
NPHP4-203ENST00000378169 IP6K1Q92551 441 aa15.6■□□□□ 0.09
NPHP4-203ENST00000378169 CWC25Q9NXE8 425 aaPredicted RBP15.6■□□□□ 0.09
NPHP4-203ENST00000378169 AKAP2Q9Y2D5 859 aa15.6■□□□□ 0.09
NPHP4-203ENST00000378169 LETM1O95202 739 aaPredicted RBP15.6■□□□□ 0.09
NPHP4-203ENST00000378169 CAMK4Q16566 473 aa15.6■□□□□ 0.09
NPHP4-203ENST00000378169 LMBR1LQ6UX01 489 aa15.6■□□□□ 0.09
NPHP4-203ENST00000378169 ZCRB1Q8TBF4 217 aaKnown RBP15.6■□□□□ 0.09
NPHP4-203ENST00000378169 PIBF1Q8WXW3 757 aa15.6■□□□□ 0.09
NPHP4-203ENST00000378169 BRMS1Q9HCU9 246 aa15.6■□□□□ 0.09
NPHP4-203ENST00000378169 NAT10Q9H0A0 1025 aaKnown RBP15.6■□□□□ 0.09
NPHP4-203ENST00000378169 TRIM22Q8IYM9 498 aa15.6■□□□□ 0.09
NPHP4-203ENST00000378169 MYO5CQ9NQX4 1742 aa15.6■□□□□ 0.09
NPHP4-203ENST00000378169 MAP3K5Q99683 1374 aa15.59■□□□□ 0.09
NPHP4-203ENST00000378169 LRRIQ1Q96JM4 1722 aa15.59■□□□□ 0.09
NPHP4-203ENST00000378169 CCDC69A6NI79 296 aa15.59■□□□□ 0.09
NPHP4-203ENST00000378169 BAG4O95429 457 aaKnown RBP15.59■□□□□ 0.09
NPHP4-203ENST00000378169 TMX3Q96JJ7 454 aa15.59■□□□□ 0.09
NPHP4-203ENST00000378169 HAND2P61296 217 aa15.59■□□□□ 0.09
NPHP4-203ENST00000378169 CCT2P78371 535 aaKnown RBP15.59■□□□□ 0.09
NPHP4-203ENST00000378169 ESYT1Q9BSJ8 1104 aa15.59■□□□□ 0.09
NPHP4-203ENST00000378169 SMC2O95347 1197 aa15.58■□□□□ 0.09
NPHP4-203ENST00000378169 LINS1Q8NG48 757 aa15.58■□□□□ 0.09
NPHP4-203ENST00000378169 TFIP11Q9UBB9 837 aaKnown RBP15.58■□□□□ 0.09
NPHP4-203ENST00000378169 ERVK-7P63135 1459 aa15.58■□□□□ 0.09
NPHP4-203ENST00000378169 KDM5CP41229 1560 aa15.58■□□□□ 0.09
NPHP4-203ENST00000378169 SBNO2Q9Y2G9 1366 aa15.58■□□□□ 0.08
NPHP4-203ENST00000378169 ANKRD20A12PQ8NF67 263 aa15.58■□□□□ 0.08
NPHP4-203ENST00000378169 DDX17Q92841 729 aaKnown RBP15.58■□□□□ 0.08
NPHP4-203ENST00000378169 MSH6P52701 1360 aa15.58■□□□□ 0.08
NPHP4-203ENST00000378169 MINDY4BA8MYZ0 360 aa15.58■□□□□ 0.08
NPHP4-203ENST00000378169 ATP2B2Q01814 1243 aa15.58■□□□□ 0.08
NPHP4-203ENST00000378169 OLFM4Q6UX06 510 aa15.58■□□□□ 0.08
NPHP4-203ENST00000378169 UBAC1Q9BSL1 405 aa15.58■□□□□ 0.08
NPHP4-203ENST00000378169 TMEM2Q9UHN6 1383 aa15.58■□□□□ 0.08
NPHP4-203ENST00000378169 PDILTQ8N807 584 aa15.57■□□□□ 0.08
NPHP4-203ENST00000378169 NUP62CLQ9H1M0 184 aa15.57■□□□□ 0.08
NPHP4-203ENST00000378169 ESPNB1AK53 854 aa15.57■□□□□ 0.08
NPHP4-203ENST00000378169 IKQ13123 557 aaPredicted RBP15.57■□□□□ 0.08
NPHP4-203ENST00000378169 NECAB1Q8N987 351 aa15.57■□□□□ 0.08
NPHP4-203ENST00000378169 NGLY1Q96IV0 654 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms