RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 IFIT5Q13325 482 aaKnown RBP17.71■□□□□ 0.43
NPHP4-201ENST00000378156 LARP6Q9BRS8 491 aaKnown RBP17.71■□□□□ 0.43
NPHP4-201ENST00000378156 TNMDQ9H2S6 317 aa17.71■□□□□ 0.43
NPHP4-201ENST00000378156 PI4KAP2A4QPH2 592 aa17.71■□□□□ 0.43
NPHP4-201ENST00000378156 SDSP20132 328 aa17.71■□□□□ 0.43
NPHP4-201ENST00000378156 PI4KAP1Q8N8J0 262 aa17.71■□□□□ 0.43
NPHP4-201ENST00000378156 RRP9O43818 475 aaKnown RBP17.7■□□□□ 0.42
NPHP4-201ENST00000378156 BAG4O95429 457 aaKnown RBP17.7■□□□□ 0.42
NPHP4-201ENST00000378156 HMGB2P26583 209 aaKnown RBP17.7■□□□□ 0.42
NPHP4-201ENST00000378156 C16orf71Q8IYS4 520 aaPredicted RBP17.7■□□□□ 0.42
NPHP4-201ENST00000378156 NUP133Q8WUM0 1156 aa17.7■□□□□ 0.42
NPHP4-201ENST00000378156 AIDAQ96BJ3 306 aa17.7■□□□□ 0.42
NPHP4-201ENST00000378156 CCDC8Q9H0W5 538 aaPredicted RBP17.7■□□□□ 0.42
NPHP4-201ENST00000378156 ATP2B2Q01814 1243 aa17.7■□□□□ 0.42
NPHP4-201ENST00000378156 CCP110O43303 1012 aa17.69■□□□□ 0.42
NPHP4-201ENST00000378156 IFIT1P09914 478 aaKnown RBP17.69■□□□□ 0.42
NPHP4-201ENST00000378156 TXLNAP40222 546 aa17.69■□□□□ 0.42
NPHP4-201ENST00000378156 UBAC1Q9BSL1 405 aa17.69■□□□□ 0.42
NPHP4-201ENST00000378156 TRMT112Q9UI30 125 aaKnown RBP17.69■□□□□ 0.42
NPHP4-201ENST00000378156 SMC5Q8IY18 1101 aa17.69■□□□□ 0.42
NPHP4-201ENST00000378156 NGLY1Q96IV0 654 aa17.69■□□□□ 0.42
NPHP4-201ENST00000378156 MAP3K2Q9Y2U5 619 aa17.69■□□□□ 0.42
NPHP4-201ENST00000378156 BLMP54132 1417 aaPredicted RBP17.69■□□□□ 0.42
NPHP4-201ENST00000378156 ME1P48163 572 aa17.69■□□□□ 0.42
NPHP4-201ENST00000378156 DHX8Q14562 1220 aaKnown RBP17.69■□□□□ 0.42
NPHP4-201ENST00000378156 KRT24Q2M2I5 525 aa17.69■□□□□ 0.42
NPHP4-201ENST00000378156 ZSCAN30Q86W11 494 aa17.69■□□□□ 0.42
NPHP4-201ENST00000378156 ZBTB3Q9H5J0 574 aa17.69■□□□□ 0.42
NPHP4-201ENST00000378156 IMMTQ16891 758 aaKnown RBP17.69■□□□□ 0.42
NPHP4-201ENST00000378156 ANKRD44Q8N8A2 993 aa17.68■□□□□ 0.42
NPHP4-201ENST00000378156 SPATA32Q96LK8 384 aa17.68■□□□□ 0.42
NPHP4-201ENST00000378156 TEX13AQ9BXU3 409 aaPredicted RBP17.68■□□□□ 0.42
NPHP4-201ENST00000378156 PPP1R1BQ9UD71 204 aaPredicted RBP17.68■□□□□ 0.42
NPHP4-201ENST00000378156 ZPR1O75312 459 aa17.68■□□□□ 0.42
NPHP4-201ENST00000378156 CDKL5O76039 1030 aa17.68■□□□□ 0.42
NPHP4-201ENST00000378156 GDPD2Q9HCC8 539 aa17.68■□□□□ 0.42
NPHP4-201ENST00000378156 U3KPZ7 1027 aaPredicted RBP17.68■□□□□ 0.42
NPHP4-201ENST00000378156 EIF4A2Q14240 407 aaKnown RBP17.68■□□□□ 0.42
NPHP4-201ENST00000378156 PIK3R4Q99570 1358 aa17.67■□□□□ 0.42
NPHP4-201ENST00000378156 NPHP3Q7Z494 1330 aa17.67■□□□□ 0.42
NPHP4-201ENST00000378156 ANXA1P04083 346 aa17.67■□□□□ 0.42
NPHP4-201ENST00000378156 PDIA4P13667 645 aaKnown RBP17.67■□□□□ 0.42
NPHP4-201ENST00000378156 SNRPA1P09661 255 aaKnown RBP17.67■□□□□ 0.42
NPHP4-201ENST00000378156 DDX11Q96FC9 970 aa17.67■□□□□ 0.42
NPHP4-201ENST00000378156 PPP1R42Q7Z4L9 355 aa17.67■□□□□ 0.42
NPHP4-201ENST00000378156 PATL2C9JE40 543 aaKnown RBP17.66■□□□□ 0.42
NPHP4-201ENST00000378156 MSH6P52701 1360 aa17.66■□□□□ 0.42
NPHP4-201ENST00000378156 MAST1Q9Y2H9 1570 aa17.66■□□□□ 0.42
NPHP4-201ENST00000378156 SMC2O95347 1197 aa17.66■□□□□ 0.42
NPHP4-201ENST00000378156 ZMYM3Q14202 1370 aa17.65■□□□□ 0.42
NPHP4-201ENST00000378156 NUP62CLQ9H1M0 184 aa17.65■□□□□ 0.42
NPHP4-201ENST00000378156 ECHDC1Q9NTX5 307 aa17.65■□□□□ 0.42
NPHP4-201ENST00000378156 CDK5RAP3Q96JB5 506 aa17.65■□□□□ 0.42
NPHP4-201ENST00000378156 NCKAP5LQ9HCH0 1330 aa17.65■□□□□ 0.42
NPHP4-201ENST00000378156 ATP5J2-PTCD1G3V325 749 aa17.65■□□□□ 0.42
NPHP4-201ENST00000378156 GPTP24298 496 aa17.65■□□□□ 0.42
NPHP4-201ENST00000378156 CAVIN4Q5BKX8 364 aa17.65■□□□□ 0.42
NPHP4-201ENST00000378156 PDILTQ8N807 584 aa17.65■□□□□ 0.42
NPHP4-201ENST00000378156 CFAP45Q9UL16 551 aa17.65■□□□□ 0.42
NPHP4-201ENST00000378156 UBE3BQ7Z3V4 1068 aa17.64■□□□□ 0.41
NPHP4-201ENST00000378156 H0YHG0 523 aa17.64■□□□□ 0.41
NPHP4-201ENST00000378156 RBM5P52756 815 aaKnown RBP eCLIP17.64■□□□□ 0.41
NPHP4-201ENST00000378156 PDE1AP54750 535 aa17.64■□□□□ 0.41
NPHP4-201ENST00000378156 LIMCH1Q9UPQ0 1083 aa17.63■□□□□ 0.41
NPHP4-201ENST00000378156 ANKRD18BA2A2Z9 1011 aa17.63■□□□□ 0.41
NPHP4-201ENST00000378156 RBM27Q9P2N5 1060 aaKnown RBP17.63■□□□□ 0.41
NPHP4-201ENST00000378156 XRCC6P12956 609 aaKnown RBP eCLIP17.63■□□□□ 0.41
NPHP4-201ENST00000378156 ANKRD13DQ6ZTN6 518 aa17.63■□□□□ 0.41
NPHP4-201ENST00000378156 PANK2Q9BZ23 570 aa17.63■□□□□ 0.41
NPHP4-201ENST00000378156 CAMK4Q16566 473 aa17.63■□□□□ 0.41
NPHP4-201ENST00000378156 CWC25Q9NXE8 425 aaPredicted RBP17.62■□□□□ 0.41
NPHP4-201ENST00000378156 CEP170Q5SW79 1584 aa17.62■□□□□ 0.41
NPHP4-201ENST00000378156 NPATQ14207 1427 aa17.62■□□□□ 0.41
NPHP4-201ENST00000378156 OFD1O75665 1012 aa17.62■□□□□ 0.41
NPHP4-201ENST00000378156 SOGA3Q5TF21 947 aa17.62■□□□□ 0.41
NPHP4-201ENST00000378156 SNX21Q969T3 373 aa17.62■□□□□ 0.41
NPHP4-201ENST00000378156 TRIM35Q9UPQ4 493 aa17.62■□□□□ 0.41
NPHP4-201ENST00000378156 TBX22Q9Y458 520 aa17.62■□□□□ 0.41
NPHP4-201ENST00000378156 INSRP06213 1382 aa17.62■□□□□ 0.41
NPHP4-201ENST00000378156 KLHL40Q2TBA0 621 aa17.62■□□□□ 0.41
NPHP4-201ENST00000378156 CCDC191Q8NCU4 936 aa17.62■□□□□ 0.41
NPHP4-201ENST00000378156 TARBP1Q13395 1621 aaKnown RBP17.62■□□□□ 0.41
NPHP4-201ENST00000378156 C19orf44Q9H6X5 657 aa17.62■□□□□ 0.41
NPHP4-201ENST00000378156 RDXP35241 583 aaKnown RBP17.61■□□□□ 0.41
NPHP4-201ENST00000378156 MAP3K12Q12852 859 aa17.61■□□□□ 0.41
NPHP4-201ENST00000378156 LEKR1Q6ZMV7 388 aa17.61■□□□□ 0.41
NPHP4-201ENST00000378156 TMX3Q96JJ7 454 aa17.61■□□□□ 0.41
NPHP4-201ENST00000378156 MBD5Q9P267 1494 aa17.61■□□□□ 0.41
NPHP4-201ENST00000378156 FLT4P35916 1363 aa17.61■□□□□ 0.41
NPHP4-201ENST00000378156 ZSCAN29Q8IWY8 852 aaPredicted RBP17.61■□□□□ 0.41
NPHP4-201ENST00000378156 DCTPP1Q9H773 170 aa17.61■□□□□ 0.41
NPHP4-201ENST00000378156 KCNA6P17658 529 aa17.61■□□□□ 0.41
NPHP4-201ENST00000378156 NOL7Q9UMY1 257 aaKnown RBP17.61■□□□□ 0.41
NPHP4-201ENST00000378156 UQCRHLA0A096LP55 91 aa17.61■□□□□ 0.41
NPHP4-201ENST00000378156 UQCRHP07919 91 aa17.61■□□□□ 0.41
NPHP4-201ENST00000378156 EPS15P42566 896 aa17.61■□□□□ 0.41
NPHP4-201ENST00000378156 FILIP1LQ4L180 1135 aa17.61■□□□□ 0.41
NPHP4-201ENST00000378156 ZCRB1Q8TBF4 217 aaKnown RBP17.61■□□□□ 0.41
NPHP4-201ENST00000378156 AKAP4Q5JQC9 854 aa17.6■□□□□ 0.41
NPHP4-201ENST00000378156 LDHAL6AQ6ZMR3 332 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms