RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 CETN2P41208 172 aa18.96■□□□□ 0.63
RGP1-201ENST00000378078 HOOK3Q86VS8 718 aa18.96■□□□□ 0.63
RGP1-201ENST00000378078 WDR33Q9C0J8 1336 aaKnown RBP18.96■□□□□ 0.63
RGP1-201ENST00000378078 ERLIN1O75477 346 aa18.96■□□□□ 0.63
RGP1-201ENST00000378078 RTEL1-TNFRSF6BF6WH68 1400 aa18.96■□□□□ 0.63
RGP1-201ENST00000378078 CCDC66A2RUB6 948 aa18.96■□□□□ 0.63
RGP1-201ENST00000378078 TMEM110-MUSTN1A8MSY1 372 aa18.96■□□□□ 0.63
RGP1-201ENST00000378078 PICALMQ13492 652 aa18.96■□□□□ 0.63
RGP1-201ENST00000378078 TMCO3Q6UWJ1 677 aa18.96■□□□□ 0.62
RGP1-201ENST00000378078 GCC1Q96CN9 775 aa18.96■□□□□ 0.62
RGP1-201ENST00000378078 PAIP2Q9BPZ3 127 aaKnown RBP18.95■□□□□ 0.62
RGP1-201ENST00000378078 ZBTB3Q9H5J0 574 aa18.95■□□□□ 0.62
RGP1-201ENST00000378078 HAND2P61296 217 aa18.95■□□□□ 0.62
RGP1-201ENST00000378078 THEMISQ8N1K5 641 aaPredicted RBP18.95■□□□□ 0.62
RGP1-201ENST00000378078 CTNNA3Q9UI47 895 aa18.95■□□□□ 0.62
RGP1-201ENST00000378078 SLC12A7Q9Y666 1083 aa18.95■□□□□ 0.62
RGP1-201ENST00000378078 SSRP1Q08945 709 aaKnown RBP18.95■□□□□ 0.62
RGP1-201ENST00000378078 POLR3GO15318 223 aaPredicted RBP18.95■□□□□ 0.62
RGP1-201ENST00000378078 WASF1Q92558 559 aa18.94■□□□□ 0.62
RGP1-201ENST00000378078 NOP2P46087 812 aaKnown RBP18.94■□□□□ 0.62
RGP1-201ENST00000378078 WAPLQ7Z5K2 1190 aa18.94■□□□□ 0.62
RGP1-201ENST00000378078 SYNCQ9H7C4 482 aa18.94■□□□□ 0.62
RGP1-201ENST00000378078 IL27Q8NEV9 243 aa18.94■□□□□ 0.62
RGP1-201ENST00000378078 F6X3S4 739 aa18.94■□□□□ 0.62
RGP1-201ENST00000378078 SNRKQ9NRH2 765 aa18.94■□□□□ 0.62
RGP1-201ENST00000378078 BIN2Q9UBW5 565 aaPredicted RBP18.94■□□□□ 0.62
RGP1-201ENST00000378078 IQSEC3Q9UPP2 1182 aaPredicted RBP18.94■□□□□ 0.62
RGP1-201ENST00000378078 SSX2IPQ9Y2D8 614 aa18.94■□□□□ 0.62
RGP1-201ENST00000378078 ATP2C2O75185 946 aa18.93■□□□□ 0.62
RGP1-201ENST00000378078 ZBTB21Q9ULJ3 1066 aa18.93■□□□□ 0.62
RGP1-201ENST00000378078 MCM2P49736 904 aa18.93■□□□□ 0.62
RGP1-201ENST00000378078 CBX1P83916 185 aa18.92■□□□□ 0.62
RGP1-201ENST00000378078 IFIT3O14879 490 aaKnown RBP18.92■□□□□ 0.62
RGP1-201ENST00000378078 SLC5A1P13866 664 aa18.92■□□□□ 0.62
RGP1-201ENST00000378078 ATP5J2-PTCD1G3V325 749 aa18.92■□□□□ 0.62
RGP1-201ENST00000378078 HSP90AA4PQ58FG1 418 aa18.92■□□□□ 0.62
RGP1-201ENST00000378078 SMTNL1A8MU46 457 aa18.92■□□□□ 0.62
RGP1-201ENST00000378078 RAPGEF3O95398 923 aa18.92■□□□□ 0.62
RGP1-201ENST00000378078 SKAP1Q86WV1 359 aa18.92■□□□□ 0.62
RGP1-201ENST00000378078 AKNAQ7Z591 1439 aa18.92■□□□□ 0.62
RGP1-201ENST00000378078 RFC4P35249 363 aa18.92■□□□□ 0.62
RGP1-201ENST00000378078 ZNF287Q9HBT7 754 aa18.92■□□□□ 0.62
RGP1-201ENST00000378078 RUSC2Q8N2Y8 1516 aa18.92■□□□□ 0.62
RGP1-201ENST00000378078 IFIT5Q13325 482 aaKnown RBP18.92■□□□□ 0.62
RGP1-201ENST00000378078 CCDC7Q96M83 1385 aa18.91■□□□□ 0.62
RGP1-201ENST00000378078 MYO1BO43795 1136 aa18.91■□□□□ 0.62
RGP1-201ENST00000378078 TMEM266Q2M3C6 531 aa18.91■□□□□ 0.62
RGP1-201ENST00000378078 HLTFQ14527 1009 aaKnown RBP eCLIP18.91■□□□□ 0.62
RGP1-201ENST00000378078 PNISRQ8TF01 805 aaKnown RBP18.91■□□□□ 0.62
RGP1-201ENST00000378078 ZNF213O14771 459 aa18.91■□□□□ 0.62
RGP1-201ENST00000378078 SP4Q02446 784 aa18.91■□□□□ 0.62
RGP1-201ENST00000378078 CTCFLQ8NI51 663 aaPredicted RBP18.9■□□□□ 0.62
RGP1-201ENST00000378078 MTIF2P46199 727 aaKnown RBP18.9■□□□□ 0.62
RGP1-201ENST00000378078 CRACR2AQ9BSW2 395 aa18.9■□□□□ 0.62
RGP1-201ENST00000378078 IDEP14735 1019 aa18.9■□□□□ 0.62
RGP1-201ENST00000378078 JAG2Q9Y219 1238 aa18.9■□□□□ 0.62
RGP1-201ENST00000378078 GOLGA8AA7E2F4 631 aa18.89■□□□□ 0.62
RGP1-201ENST00000378078 GOLGA8BA8MQT2 603 aa18.89■□□□□ 0.62
RGP1-201ENST00000378078 URI1O94763 535 aaPredicted RBP18.89■□□□□ 0.62
RGP1-201ENST00000378078 TSHZ3Q63HK5 1081 aa18.89■□□□□ 0.62
RGP1-201ENST00000378078 CCDC40Q4G0X9 1142 aa18.89■□□□□ 0.61
RGP1-201ENST00000378078 ATF7IPQ6VMQ6 1270 aa18.89■□□□□ 0.61
RGP1-201ENST00000378078 KIF4BQ2VIQ3 1234 aa18.89■□□□□ 0.61
RGP1-201ENST00000378078 FAM107BQ9H098 131 aa18.89■□□□□ 0.61
RGP1-201ENST00000378078 DUSP27Q5VZP5 1158 aa18.88■□□□□ 0.61
RGP1-201ENST00000378078 EHMT1Q9H9B1 1298 aa18.88■□□□□ 0.61
RGP1-201ENST00000378078 BAG4O95429 457 aaKnown RBP18.88■□□□□ 0.61
RGP1-201ENST00000378078 C8orf76Q96K31 380 aa18.88■□□□□ 0.61
RGP1-201ENST00000378078 RRBP1Q9P2E9 1410 aaKnown RBP18.88■□□□□ 0.61
RGP1-201ENST00000378078 ATXN8OSP0DMR3 200 aa18.88■□□□□ 0.61
RGP1-201ENST00000378078 TMEM57Q8N5G2 664 aa18.88■□□□□ 0.61
RGP1-201ENST00000378078 VEZTQ9HBM0 779 aa18.88■□□□□ 0.61
RGP1-201ENST00000378078 AKAP2Q9Y2D5 859 aa18.88■□□□□ 0.61
RGP1-201ENST00000378078 CCDC194A0A1B0GVG4 234 aa18.88■□□□□ 0.61
RGP1-201ENST00000378078 MAP3K12Q12852 859 aa18.88■□□□□ 0.61
RGP1-201ENST00000378078 GRPEL1Q9HAV7 217 aa18.88■□□□□ 0.61
RGP1-201ENST00000378078 ZNF408Q9H9D4 720 aa18.87■□□□□ 0.61
RGP1-201ENST00000378078 FANCD2Q9BXW9 1451 aa18.87■□□□□ 0.61
RGP1-201ENST00000378078 PPP1R14CQ8TAE6 165 aa18.87■□□□□ 0.61
RGP1-201ENST00000378078 TSPY2A6NKD2 308 aa18.87■□□□□ 0.61
RGP1-201ENST00000378078 CNNM3Q8NE01 707 aa18.87■□□□□ 0.61
RGP1-201ENST00000378078 SIRT1Q96EB6 747 aa18.87■□□□□ 0.61
RGP1-201ENST00000378078 ZSWIM4Q9H7M6 989 aa18.87■□□□□ 0.61
RGP1-201ENST00000378078 FERP16591 822 aa18.87■□□□□ 0.61
RGP1-201ENST00000378078 MAP3K11Q16584 847 aa18.87■□□□□ 0.61
RGP1-201ENST00000378078 CATIPQ7Z7H3 387 aa18.87■□□□□ 0.61
RGP1-201ENST00000378078 SPECC1Q5M775 1068 aa18.86■□□□□ 0.61
RGP1-201ENST00000378078 GOLIM4O00461 696 aa18.86■□□□□ 0.61
RGP1-201ENST00000378078 SH3BP5O60239 455 aa18.86■□□□□ 0.61
RGP1-201ENST00000378078 ANKRD18BA2A2Z9 1011 aa18.86■□□□□ 0.61
RGP1-201ENST00000378078 IQCA1Q86XH1 822 aa18.86■□□□□ 0.61
RGP1-201ENST00000378078 TSNARE1Q96NA8 513 aa18.86■□□□□ 0.61
RGP1-201ENST00000378078 RNF216Q9NWF9 866 aaPredicted RBP18.86■□□□□ 0.61
RGP1-201ENST00000378078 U3KPZ7 1027 aaPredicted RBP18.86■□□□□ 0.61
RGP1-201ENST00000378078 KIF5CO60282 957 aa18.85■□□□□ 0.61
RGP1-201ENST00000378078 FAM170AA1A519 330 aa18.85■□□□□ 0.61
RGP1-201ENST00000378078 MAATS1Q7Z4T9 603 aa18.85■□□□□ 0.61
RGP1-201ENST00000378078 FYCO1Q9BQS8 1478 aa18.85■□□□□ 0.61
RGP1-201ENST00000378078 TOP1P11387 765 aaKnown RBP18.85■□□□□ 0.61
RGP1-201ENST00000378078 KAT14Q9H8E8 782 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms