RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 HMGB1P09429 215 aaKnown RBP21.07■□□□□ 0.96
CLSTN1-202ENST00000377298 CCDC192P0DO97 292 aa21.07■□□□□ 0.96
CLSTN1-202ENST00000377298 LDHAL6AQ6ZMR3 332 aa21.07■□□□□ 0.96
CLSTN1-202ENST00000377298 POLR3DP05423 398 aaPredicted RBP21.06■□□□□ 0.96
CLSTN1-202ENST00000377298 PARD3Q8TEW0 1356 aa21.06■□□□□ 0.96
CLSTN1-202ENST00000377298 ATP5J2-PTCD1G3V325 749 aa21.06■□□□□ 0.96
CLSTN1-202ENST00000377298 WWC2Q6AWC2 1192 aa21.06■□□□□ 0.96
CLSTN1-202ENST00000377298 SLF2Q8IX21 1173 aa21.06■□□□□ 0.96
CLSTN1-202ENST00000377298 ABCC1P33527 1531 aa21.06■□□□□ 0.96
CLSTN1-202ENST00000377298 EVI5LQ96CN4 794 aa21.06■□□□□ 0.96
CLSTN1-202ENST00000377298 STIM1Q13586 685 aa21.05■□□□□ 0.96
CLSTN1-202ENST00000377298 SPATA32Q96LK8 384 aa21.05■□□□□ 0.96
CLSTN1-202ENST00000377298 TNMDQ9H2S6 317 aa21.05■□□□□ 0.96
CLSTN1-202ENST00000377298 YTHDC2Q9H6S0 1430 aaKnown RBP21.05■□□□□ 0.96
CLSTN1-202ENST00000377298 SMC2O95347 1197 aa21.05■□□□□ 0.96
CLSTN1-202ENST00000377298 KCNA6P17658 529 aa21.05■□□□□ 0.96
CLSTN1-202ENST00000377298 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.05■□□□□ 0.96
CLSTN1-202ENST00000377298 MKNK2Q9HBH9 465 aa21.04■□□□□ 0.96
CLSTN1-202ENST00000377298 CCDC196A0A1B0GTZ2 297 aa21.04■□□□□ 0.96
CLSTN1-202ENST00000377298 MINDY4BA8MYZ0 360 aa21.04■□□□□ 0.96
CLSTN1-202ENST00000377298 DNMT1P26358 1616 aaKnown RBP21.04■□□□□ 0.96
CLSTN1-202ENST00000377298 TTF1Q15361 905 aaPredicted RBP21.04■□□□□ 0.96
CLSTN1-202ENST00000377298 SMARCC1Q92922 1105 aaPredicted RBP21.04■□□□□ 0.96
CLSTN1-202ENST00000377298 SMARCE1Q969G3 411 aa21.04■□□□□ 0.96
CLSTN1-202ENST00000377298 PBRM1Q86U86 1689 aa21.03■□□□□ 0.96
CLSTN1-202ENST00000377298 ZFYVE9O95405 1425 aa21.03■□□□□ 0.96
CLSTN1-202ENST00000377298 RNF41Q9H4P4 317 aaPredicted RBP21.03■□□□□ 0.96
CLSTN1-202ENST00000377298 DDX46Q7L014 1031 aaKnown RBP21.03■□□□□ 0.96
CLSTN1-202ENST00000377298 SH2B1Q9NRF2 756 aaPredicted RBP21.03■□□□□ 0.96
CLSTN1-202ENST00000377298 ODF2Q5BJF6 829 aa21.02■□□□□ 0.96
CLSTN1-202ENST00000377298 CRACR2BQ8N4Y2 399 aaPredicted RBP21.02■□□□□ 0.96
CLSTN1-202ENST00000377298 NCKAP5LQ9HCH0 1330 aa21.02■□□□□ 0.96
CLSTN1-202ENST00000377298 ATP7AQ04656 1500 aa21.02■□□□□ 0.96
CLSTN1-202ENST00000377298 ABCA5Q8WWZ7 1642 aa21.02■□□□□ 0.96
CLSTN1-202ENST00000377298 RFC4P35249 363 aa21.02■□□□□ 0.96
CLSTN1-202ENST00000377298 DHX8Q14562 1220 aaKnown RBP21.02■□□□□ 0.96
CLSTN1-202ENST00000377298 MNS1Q8NEH6 495 aa21.02■□□□□ 0.96
CLSTN1-202ENST00000377298 ZRANB1Q9UGI0 708 aa21.02■□□□□ 0.96
CLSTN1-202ENST00000377298 ADGRL2O95490 1459 aa21.02■□□□□ 0.96
CLSTN1-202ENST00000377298 UPF3BQ9BZI7 483 aaKnown RBP21.01■□□□□ 0.95
CLSTN1-202ENST00000377298 CHPF2Q9P2E5 772 aa21.01■□□□□ 0.95
CLSTN1-202ENST00000377298 ZNF213O14771 459 aa21.01■□□□□ 0.95
CLSTN1-202ENST00000377298 ALDH1L1O75891 902 aa21.01■□□□□ 0.95
CLSTN1-202ENST00000377298 GCP02774 474 aa21.01■□□□□ 0.95
CLSTN1-202ENST00000377298 IL2RBP14784 551 aa21.01■□□□□ 0.95
CLSTN1-202ENST00000377298 BMP2KQ9NSY1 1161 aaPredicted RBP21.01■□□□□ 0.95
CLSTN1-202ENST00000377298 CEP170Q5SW79 1584 aa21.01■□□□□ 0.95
CLSTN1-202ENST00000377298 ANXA1P04083 346 aa21.01■□□□□ 0.95
CLSTN1-202ENST00000377298 IQCA1Q86XH1 822 aa21.01■□□□□ 0.95
CLSTN1-202ENST00000377298 DDB1Q16531 1140 aa21■□□□□ 0.95
CLSTN1-202ENST00000377298 BMP2KLQ5H9B9 411 aa21■□□□□ 0.95
CLSTN1-202ENST00000377298 CEP131Q9UPN4 1083 aa21■□□□□ 0.95
CLSTN1-202ENST00000377298 XAGE3Q8WTP9 111 aa21■□□□□ 0.95
CLSTN1-202ENST00000377298 MPHOSPH10O00566 681 aaKnown RBP21■□□□□ 0.95
CLSTN1-202ENST00000377298 LDHCP07864 332 aa21■□□□□ 0.95
CLSTN1-202ENST00000377298 HSPA2P54652 639 aa21■□□□□ 0.95
CLSTN1-202ENST00000377298 DDX11Q96FC9 970 aa21■□□□□ 0.95
CLSTN1-202ENST00000377298 A0A1W2PP64 1363 aa20.99■□□□□ 0.95
CLSTN1-202ENST00000377298 MTHFSDQ2M296 383 aaKnown RBP20.99■□□□□ 0.95
CLSTN1-202ENST00000377298 C6orf229H3BNL8 230 aa20.99■□□□□ 0.95
CLSTN1-202ENST00000377298 PZPP20742 1482 aa20.99■□□□□ 0.95
CLSTN1-202ENST00000377298 COPS6Q7L5N1 327 aa20.99■□□□□ 0.95
CLSTN1-202ENST00000377298 LRRC59Q96AG4 307 aaKnown RBP20.99■□□□□ 0.95
CLSTN1-202ENST00000377298 CCDC152Q4G0S7 254 aa20.98■□□□□ 0.95
CLSTN1-202ENST00000377298 ZNF444Q8N0Y2 327 aaPredicted RBP20.98■□□□□ 0.95
CLSTN1-202ENST00000377298 CTCFLQ8NI51 663 aaPredicted RBP20.98■□□□□ 0.95
CLSTN1-202ENST00000377298 CCDC83Q8IWF9 413 aa20.98■□□□□ 0.95
CLSTN1-202ENST00000377298 SEC63Q9UGP8 760 aaKnown RBP20.98■□□□□ 0.95
CLSTN1-202ENST00000377298 CCP110O43303 1012 aa20.98■□□□□ 0.95
CLSTN1-202ENST00000377298 PIK3C2GO75747 1445 aa20.98■□□□□ 0.95
CLSTN1-202ENST00000377298 KSR2Q6VAB6 950 aa20.98■□□□□ 0.95
CLSTN1-202ENST00000377298 ZHX3Q9H4I2 956 aa20.97■□□□□ 0.95
CLSTN1-202ENST00000377298 SERPINC1P01008 464 aa20.97■□□□□ 0.95
CLSTN1-202ENST00000377298 ZNF76P36508 570 aa20.97■□□□□ 0.95
CLSTN1-202ENST00000377298 SLC39A6Q13433 755 aa20.97■□□□□ 0.95
CLSTN1-202ENST00000377298 CABLES1Q8TDN4 633 aa20.97■□□□□ 0.95
CLSTN1-202ENST00000377298 MAST1Q9Y2H9 1570 aa20.97■□□□□ 0.95
CLSTN1-202ENST00000377298 HDAC1Q13547 482 aaPredicted RBP20.97■□□□□ 0.95
CLSTN1-202ENST00000377298 NBPF6Q5VWK0 638 aa20.97■□□□□ 0.95
CLSTN1-202ENST00000377298 NBPF5PQ86XG9 351 aaPredicted RBP20.97■□□□□ 0.95
CLSTN1-202ENST00000377298 NBPF4Q96M43 638 aa20.97■□□□□ 0.95
CLSTN1-202ENST00000377298 UQCRFS1P1P0C7P4 283 aa20.97■□□□□ 0.95
CLSTN1-202ENST00000377298 BRPF1P55201 1214 aaPredicted RBP20.97■□□□□ 0.95
CLSTN1-202ENST00000377298 CARD14Q9BXL6 1004 aa20.97■□□□□ 0.95
CLSTN1-202ENST00000377298 BCL11BQ9C0K0 894 aaPredicted RBP20.97■□□□□ 0.95
CLSTN1-202ENST00000377298 PLEKHH1Q9ULM0 1364 aa20.96■□□□□ 0.95
CLSTN1-202ENST00000377298 GOLIM4O00461 696 aa20.96■□□□□ 0.95
CLSTN1-202ENST00000377298 ATP6V1AP38606 617 aa20.96■□□□□ 0.95
CLSTN1-202ENST00000377298 CCDC173Q0VFZ6 552 aa20.96■□□□□ 0.95
CLSTN1-202ENST00000377298 IP6K1Q92551 441 aa20.96■□□□□ 0.95
CLSTN1-202ENST00000377298 ZNHIT6Q9NWK9 470 aaKnown RBP20.96■□□□□ 0.95
CLSTN1-202ENST00000377298 HMGN5P82970 282 aaKnown RBP20.96■□□□□ 0.95
CLSTN1-202ENST00000377298 C8orf58Q8NAV2 365 aa20.96■□□□□ 0.95
CLSTN1-202ENST00000377298 RHPN1Q8TCX5 695 aa20.96■□□□□ 0.95
CLSTN1-202ENST00000377298 RANBP6O60518 1105 aaKnown RBP20.95■□□□□ 0.94
CLSTN1-202ENST00000377298 SPTY2D1Q68D10 685 aaPredicted RBP20.95■□□□□ 0.94
CLSTN1-202ENST00000377298 NUP62CLQ9H1M0 184 aa20.95■□□□□ 0.94
CLSTN1-202ENST00000377298 ARGLU1Q9NWB6 273 aaPredicted RBP20.95■□□□□ 0.94
CLSTN1-202ENST00000377298 MCM4P33991 863 aa20.95■□□□□ 0.94
CLSTN1-202ENST00000377298 MRPL50Q8N5N7 158 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms